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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:96839..99677+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006688-T2 ID=KJC3_006688-T2|Name=KJC3_006688-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2839bp|location=Sequence derived from alignment at ch5:96839..99677+ (Aspergillus niger KJC3)
TAAAGGGAAGGATGCTGAGGACGGGGTGGAGGAGTTGTGGGGGAGGAAGG
TTTGGATGTGAGTTTTTTTGTTCCAATTCTTCTTTTTGGTTATGTAGGGT
TGGTGGTGTTTGATGATATTGACTATGTATAGGATCAAACTTGCCAATGA
TGTCACGTATAGACGGTATGTCTCTATTTCCGTTATTTCGACAAAGTATG
CTGATGTATCTAGTATGAATCAGACCATGGAGAAAATGGTCAAAATGGCC
GAGTCCGAACATACGCATTTCATGCGTGTTGCCTTCGGTCATACCTCGCC
TATGCTGCCCGACTACGATTCTATAGGGGCTCTAGAGTTTACGGATCCTA
CGTTGAACGACTCCCAGAAGGAGGCCATTCGGTTTGCCCTGGCAGCACGT
GAAATTGCCCTCATTCACGGCCCGCCCGGTACAGGCAAAACGCACACGCT
GATCGAGTTGATCGTGCAGATGGTGCAGCGCAAGCAGCGGGTGCTGGTCT
GCGGCCCGTCGAACATCTCCGTGGACAACATTGTGGAGAGACTGGCGCCG
AAGAAGGTCCCCGTGGTGCGCATCGGACATCCGGCGCGATTGCTACCGTC
AGTCCTGGATCATTCACTGGAAGTGCTCACGCACACGTCGGAGGCGGCGG
CGATTGTTCGCGACGTCCGCAAGGAGATCGATCAGAAGCAGGCGAGTATC
CGGAAGACCCGAGCCGCACGGGAGCGACGGGCCATCTACGATGATCTGCG
AGAACTGCGGCGCGAGTTCCGCGAGCGCGAGAACAAATGCGTAGAGAATC
TGGTCCGTGAGAGCAGTGTGGTGCTGGCGACGCTGCATGGAGCGGGCGGT
CATCAGCTAAAGAACCAAAAGTTCGATGTGGTCATCATCGATGAGGCGAG
TCAGGCACTAGAGGCGCAGTGCTGGATCCCGCTGTTGTCGGCATCCAAGG
TGGTCCTTGCTGGTGATCATTTGCAGCTGCCGCCGACCGTGAAGTCGACT
AAAGAGAATGCGAAAAAAGCGGCCAAAGAGAAGGAGGATAAGAAAGAAAA
CGGAGAGTTGCTGGAGAATGTGTCGCTGGAGACGACCCTGTTCGATCGAC
TGCTATCCATGCACGGGCCTGGAATCAAACGGATGCTCACGACGCAGTAC
CGGATGCACGAAAAGATTATGCAATTTCCGTCGGACGAGTTGTATGACTC
GAAATTAATGGCTGCAGACTCTGTCAAGGATCGACTGCTGAAGGACCTAC
CCTACGAAGTCGAGGAGACCGATGACACCAAGGAGCCGCTGGTGTTCTGG
GATACGCAAGGTGGTGACTTCCCCGAAAAGACCGAGGATGCGGATCTGGG
CAAGAAAGCCCACCTGGGCGAAAGTAAGAGCAATGACATGGAGGCGCTGG
TAGTGAGCAGGCACGTCGATGCTCTGGTGGACGCAGGGATACACCCCGAA
GACATTGCGGTGATTACGCCGTACAACGGTCAGCTGGCCGTACTGTCGCA
GATGCTGCGGGAGAAATACCCTAGCATTGAGCTGGGCAGCGTCGACGGGT
TCCAAGGGCGGGAGAAGGAAGCGGTGGTGGTGAGTCTGGTGCGCAGCAAT
AGCGAGCACGAAGTGGGATTCTTGGGGGAACGGCGTCGTCTCAACGGTAA
GATCCCTGCCAAGTGGCGAGCCTGCATGGACTGACAGCATTAGTGGCCAT
GACGCGGCCGAAACGGCATCTGTGCATCTGCGGTGATTCGGAGACGATTA
GCAAGTGAGTGCCCCCCTATCGTGGTCAGCATTTACTTTGTAGGCAAATA
GTTGACGTCGACTTTTTTTCTCCACAGGGGCAGTGGCTTCCTTAAGCGAT
GGATGGCATTCCTGGAGGAACATGCCGATTTGCGGTATCCGGATGCCGGC
GATCTGTTGTGATCACGTTTAATCTAGCTACCGTGTATTTTTGGGACGTT
GCTTGGGCCATGAGTGTCACCGATGGGAGGTCCTGCAATCAGATGCAGTG
CAGCGTTGTGCAACGTCTGCACCAGACGGTCCCTTGCAGCCGAACAACAA
ACCGCGAATAGAAAACAAACAGACTCAACCGAGCACAGGCGCAAGGGATA
GAATTGAAGGAGGCGATTCAGACACGCGATGAAAGGATTGCCCAGAGAGG
ACAAAATGACATGGGCGCATTCCCCTGTCACGTCAACCATCCACATTCCA
TAGCTAGAAATCTAGATTATTATCCATGTGGCTGCTCGATGGAATTCCGA
GAGCCCCTCCATTGGAGACGCCAACGAAGAGGGGAAAGGAAGATCGTGCG
TCATGGCGTTGTGAAGTATGCAGGATCTAGAATCCCACGAGCGGGACAGT
CAGCCTTGCTTCTGTCTACAGCATAGATAGATAGACAGTGATTTGATTTG
ATTAATGAATGAATGAGGATTGATTGTGCCCGACCGAGGCGAGTGAGAGG
GGAGGGCCCGTCAGCGAGCGAACGGTTCCGAGCGTCTGATGGGCCAACTT
AATCGGTTCTGGACGGGAGCGGAGGGGGGAGGCCACTTGGTGTGTTTCAG
CGCGGAGGATTGCCATCGTGGTCCAATGATGGGAAGGAATCAAGAGGAGT
TGAATGAGTCGCGAGGGGATCCAAGCAATGAGTGAGTGGAGGAGGAGGAG
GGAGTTGGAAATGGGGCCGAAGGAGTGAGGGAGGAGTAGAGACCGTCAGT
GTGTGTGCATGGATGGTGATGAGTTGGCGCGGCAGAGAAGAGAAAAAGTG
AAATTAACTCTGCATACTAACTAAGTATTCTGCAGGAGTAGTAGGGAAAT
ACCCGGTTGAAGATGGAATTTACCACTTTTGTGGATGGC back to topCoding sequence (CDS) from alignment at ch5:96839..99677+ >KJC3_006688-T2 ID=KJC3_006688-T2|Name=KJC3_006688-T2|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch5:96839..99677+ (Aspergillus niger KJC3)
ATGATCAAACTTGCCAATGATGTCACGTATAGACGGTATGTCTCTATTTC
CGTTATTTCGACAAAGTATGCTGATGTATCTAGTATGAATCAGACCATGG
AGAAAATGGTCAAAATGGCCGAGTCCGAACATACGCATTTCATGCGTGTT
GCCTTCGGTCATACCTCGCCTATGCTGCCCGACTACGATTCTATAGGGGC
TCTAGAGTTTACGGATCCTACGTTGAACGACTCCCAGAAGGAGGCCATTC
GGTTTGCCCTGGCAGCACGTGAAATTGCCCTCATTCACGGCCCGCCCGGT
ACAGGCAAAACGCACACGCTGATCGAGTTGATCGTGCAGATGGTGCAGCG
CAAGCAGCGGGTGCTGGTCTGCGGCCCGTCGAACATCTCCGTGGACAACA
TTGTGGAGAGACTGGCGCCGAAGAAGGTCCCCGTGGTGCGCATCGGACAT
CCGGCGCGATTGCTACCGTCAGTCCTGGATCATTCACTGGAAGTGCTCAC
GCACACGTCGGAGGCGGCGGCGATTGTTCGCGACGTCCGCAAGGAGATCG
ATCAGAAGCAGGCGAGTATCCGGAAGACCCGAGCCGCACGGGAGCGACGG
GCCATCTACGATGATCTGCGAGAACTGCGGCGCGAGTTCCGCGAGCGCGA
GAACAAATGCGTAGAGAATCTGGTCCGTGAGAGCAGTGTGGTGCTGGCGA
CGCTGCATGGAGCGGGCGGTCATCAGCTAAAGAACCAAAAGTTCGATGTG
GTCATCATCGATGAGGCGAGTCAGGCACTAGAGGCGCAGTGCTGGATCCC
GCTGTTGTCGGCATCCAAGGTGGTCCTTGCTGGTGATCATTTGCAGCTGC
CGCCGACCGTGAAGTCGACTAAAGAGAATGCGAAAAAAGCGGCCAAAGAG
AAGGAGGATAAGAAAGAAAACGGAGAGTTGCTGGAGAATGTGTCGCTGGA
GACGACCCTGTTCGATCGACTGCTATCCATGCACGGGCCTGGAATCAAAC
GGATGCTCACGACGCAGTACCGGATGCACGAAAAGATTATGCAATTTCCG
TCGGACGAGTTGTATGACTCGAAATTAATGGCTGCAGACTCTGTCAAGGA
TCGACTGCTGAAGGACCTACCCTACGAAGTCGAGGAGACCGATGACACCA
AGGAGCCGCTGGTGTTCTGGGATACGCAAGGTGGTGACTTCCCCGAAAAG
ACCGAGGATGCGGATCTGGGCAAGAAAGCCCACCTGGGCGAAAGTAAGAG
CAATGACATGGAGGCGCTGGTAGTGAGCAGGCACGTCGATGCTCTGGTGG
ACGCAGGGATACACCCCGAAGACATTGCGGTGATTACGCCGTACAACGGT
CAGCTGGCCGTACTGTCGCAGATGCTGCGGGAGAAATACCCTAGCATTGA
GCTGGGCAGCGTCGACGGGTTCCAAGGGCGGGAGAAGGAAGCGGTGGTGG
TGAGTCTGGTGCGCAGCAATAGCGAGCACGAAGTGGGATTCTTGGGGGAA
CGGCGTCGTCTCAACGGTAAGATCCCTGCCAAGTGGCGAGCCTGCATGGA
CTGAATGATCAAACTTGCCAATGATGTCACGTATAGACGGTATGTCTCTA
TTTCCGTTATTTCGACAAAGTATGCTGATGTATCTAGTATGAATCAGACC
ATGGAGAAAATGGTCAAAATGGCCGAGTCCGAACATACGCATTTCATGCG
TGTTGCCTTCGGTCATACCTCGCCTATGCTGCCCGACTACGATTCTATAG
GGGCTCTAGAGTTTACGGATCCTACGTTGAACGACTCCCAGAAGGAGGCC
ATTCGGTTTGCCCTGGCAGCACGTGAAATTGCCCTCATTCACGGCCCGCC
CGGTACAGGCAAAACGCACACGCTGATCGAGTTGATCGTGCAGATGGTGC
AGCGCAAGCAGCGGGTGCTGGTCTGCGGCCCGTCGAACATCTCCGTGGAC
AACATTGTGGAGAGACTGGCGCCGAAGAAGGTCCCCGTGGTGCGCATCGG
ACATCCGGCGCGATTGCTACCGTCAGTCCTGGATCATTCACTGGAAGTGC
TCACGCACACGTCGGAGGCGGCGGCGATTGTTCGCGACGTCCGCAAGGAG
ATCGATCAGAAGCAGGCGAGTATCCGGAAGACCCGAGCCGCACGGGAGCG
ACGGGCCATCTACGATGATCTGCGAGAACTGCGGCGCGAGTTCCGCGAGC
GCGAGAACAAATGCGTAGAGAATCTGGTCCGTGAGAGCAGTGTGGTGCTG
GCGACGCTGCATGGAGCGGGCGGTCATCAGCTAAAGAACCAAAAGTTCGA
TGTGGTCATCATCGATGAGGCGAGTCAGGCACTAGAGGCGCAGTGCTGGA
TCCCGCTGTTGTCGGCATCCAAGGTGGTCCTTGCTGGTGATCATTTGCAG
CTGCCGCCGACCGTGAAGTCGACTAAAGAGAATGCGAAAAAAGCGGCCAA
AGAGAAGGAGGATAAGAAAGAAAACGGAGAGTTGCTGGAGAATGTGTCGC
TGGAGACGACCCTGTTCGATCGACTGCTATCCATGCACGGGCCTGGAATC
AAACGGATGCTCACGACGCAGTACCGGATGCACGAAAAGATTATGCAATT
TCCGTCGGACGAGTTGTATGACTCGAAATTAATGGCTGCAGACTCTGTCA
AGGATCGACTGCTGAAGGACCTACCCTACGAAGTCGAGGAGACCGATGAC
ACCAAGGAGCCGCTGGTGTTCTGGGATACGCAAGGTGGTGACTTCCCCGA
AAAGACCGAGGATGCGGATCTGGGCAAGAAAGCCCACCTGGGCGAAAGTA
AGAGCAATGACATGGAGGCGCTGGTAGTGAGCAGGCACGTCGATGCTCTG
GTGGACGCAGGGATACACCCCGAAGACATTGCGGTGATTACGCCGTACAA
CGGTCAGCTGGCCGTACTGTCGCAGATGCTGCGGGAGAAATACCCTAGCA
TTGAGCTGGGCAGCGTCGACGGGTTCCAAGGGCGGGAGAAGGAAGCGGTG
GTGGTGAGTCTGGTGCGCAGCAATAGCGAGCACGAAGTGGGATTCTTGGG
GGAACGGCGTCGTCTCAACGGTAAGATCCCTGCCAAGTGGCGAGCCTGCA
TGGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006688-T2.utr5p1 | KJC3_006688-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006688-T2.utr3p1 | KJC3_006688-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR041679 |
| DBxref | InterPro:IPR041677 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF09848 |
| DBxref | PFAM:PF13604 |
| DBxref | PFAM:PF13245 |
| DBxref | PFAM:PF13087 |
| DBxref | PFAM:PF13086 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:96839..99677 + |
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