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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:114896..115999+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006694-T1 ID=KJC3_006694-T1|Name=KJC3_006694-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1104bp|location=Sequence derived from alignment at ch5:114896..115999+ (Aspergillus niger KJC3)
ATGACCATCTCAACTACTACCAACAACCAAGACCCCCTCCCCCTCCCACC
CCCCTTCAGCACCATCCCCCGACACGTCCTAACCTTCGGCCCCTCCCCTA
TCCACGCCCTCCCGCTCATCACCTCCGCCCTCTCCCCCCCAAACCCATCA
ACAACCATCTACGCCAAACGCGACGACCTATCCTCCCCTCTCGCCTCCGG
AGGCGGCAACAAGACCCGCAAACTAGAATACCTCATCCCGGACGCCCTCT
CCAGCGGTTCGACAACCCTAATCTCCATCGGGGGGATCCAATCAAACCAT
ACCCGGCAGGTCGCCGCGGCCGCCACAGTGACGGGCTTGAAATGTCGGGT
GATCCAAGAAGACTGGGTTCCCTGGAACGACGCGCACTACAGCAAGGTGG
GGAACATCCAGCTATCGAGACTCATGGGGGCGGATGTACGGCTTGATCCA
TCGGGATTTGGGATCGAGCATAAGAGTACATTAAAGAAGCTGGAAGAGGA
GTGTATCGCGGCAGGCGAGAAACCGTATTATATCCCTGCGGGCGCGTCGG
ATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTGGGCGTTTGAGGTGCGG
GCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGACGGTGGTGGTTTGTGC
GGTGACGGGGAGTACGATGGCGGGGATGGTGGCGGGGTTTAAGTTGTTGG
AGAAGTTGGATCGAGAGGCTGGAAATGGGAGGGGGAAGACGAGGGTGGTG
GGGATTGATGCGAGTGCGAAGCCGAAGGAGACGAGGGAGCAGGTGTTGCG
GATTGCGAAGGAGACGGCGGAGAGGATTGGGTTGGGGAGGGAGGAGGTAT
CGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCATGGGGGTGTGTATGGA
GTGCCGGATAAGAGGACGTGGGAGGCGATTGAGTTTGCGGCGAAGACGGA
GGCGTTTATTACGGATCCGGTGTATGAGGGGAAGAGTTTTGCGGGGATGA
TGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAATATTCTGTTTGCGCAT
TTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGGATTTGGGGAAGACGCA
GTAG back to topCoding sequence (CDS) from alignment at ch5:114896..115999+ >KJC3_006694-T1 ID=KJC3_006694-T1|Name=KJC3_006694-T1|organism=Aspergillus niger KJC3|type=CDS|length=1104bp|location=Sequence derived from alignment at ch5:114896..115999+ (Aspergillus niger KJC3)
ATGACCATCTCAACTACTACCAACAACCAAGACCCCCTCCCCCTCCCACC
CCCCTTCAGCACCATCCCCCGACACGTCCTAACCTTCGGCCCCTCCCCTA
TCCACGCCCTCCCGCTCATCACCTCCGCCCTCTCCCCCCCAAACCCATCA
ACAACCATCTACGCCAAACGCGACGACCTATCCTCCCCTCTCGCCTCCGG
AGGCGGCAACAAGACCCGCAAACTAGAATACCTCATCCCGGACGCCCTCT
CCAGCGGTTCGACAACCCTAATCTCCATCGGGGGGATCCAATCAAACCAT
ACCCGGCAGGTCGCCGCGGCCGCCACAGTGACGGGCTTGAAATGTCGGGT
GATCCAAGAAGACTGGGTTCCCTGGAACGACGCGCACTACAGCAAGGTGG
GGAACATCCAGCTATCGAGACTCATGGGGGCGGATGTACGGCTTGATCCA
TCGGGATTTGGGATCGAGCATAAGAGTACATTAAAGAAGCTGGAAGAGGA
GTGTATCGCGGCAGGCGAGAAACCGTATTATATCCCTGCGGGCGCGTCGG
ATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTGGGCGTTTGAGGTGCGG
GCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGACGGTGGTGGTTTGTGC
GGTGACGGGGAGTACGATGGCGGGGATGGTGGCGGGGTTTAAGTTGTTGG
AGAAGTTGGATCGAGAGGCTGGAAATGGGAGGGGGAAGACGAGGGTGGTG
GGGATTGATGCGAGTGCGAAGCCGAAGGAGACGAGGGAGCAGGTGTTGCG
GATTGCGAAGGAGACGGCGGAGAGGATTGGGTTGGGGAGGGAGGAGGTAT
CGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCATGGGGGTGTGTATGGA
GTGCCGGATAAGAGGACGTGGGAGGCGATTGAGTTTGCGGCGAAGACGGA
GGCGTTTATTACGGATCCGGTGTATGAGGGGAAGAGTTTTGCGGGGATGA
TGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAATATTCTGTTTGCGCAT
TTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGGATTTGGGGAAGACGCA
GTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009310 | amine catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0008660 | 1-aminocyclopropane-1-carboxylate deaminase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005965 |
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR001926 |
| DBxref | InterPro:IPR027278 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:114896..115999 + |
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