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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:129738..130765- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006700-T1 ID=KJC3_006700-T1|Name=KJC3_006700-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1028bp|location=Sequence derived from alignment at ch5:129738..130765- (Aspergillus niger KJC3)
CATTGTGAACCGCTCCACCACCGCAGAGACGCCCCAGATTGAAACTTGTT
CAATTCAACTCAACCACATGTCCCGACCTGTTTCTCCCGCAACCTCCATT
GGTACTCACATATCAGGAATTTCCCATCCCCCTGGTTCGCGCAAACGCCG
TCGCATCTCCGTTCTGAACGGTATCTCCGGTGATGAACTTTTAAATCGAA
TTAGTGATTGGGATGATGGACAAAAGTCAGCTTCATCAATATCACATACG
TCTCGGAGTTCCCTGTCTTTGTCTGCGATTTCCCCAGCGACTCCCAAGGA
GGATAACAAAGCAACACGAGTCCCTGCACCATCCGTGCTGGTCGATCCCC
TACCGCGTGGACATCTTGACGACCCATTCGACTGGTACGAGGATATCGAG
GAAGCTCAGGTTCCCACTGAGCTCGACAAGTTAAGGAATGACTATCAAGC
CGAACTAAAAGCCAGTCACAGCCGCATTGCTCGCTTGGTGCGACAGATCA
ACGTTCTGCAAGGGAATATCCGGCTGCAGGCCGCAGAAATTCGATTTCTC
AGGGAGCAAAGGGACCACTTTCGCGACATGCAGAGTAACTCCAATGCCGA
CCCCAAACTGCGCTCGAACTGGGACTCCGAGCAACAGCAGGAACTAATCC
AGCTGCAAGCTGAGCAGGTCCAGTCCCTCACCGCTGAAAGAGACTACTAT
CGCCACGAGCGAGACTACTACCGTGACCGTATTCCTCGCTTAACTTCGCT
GACTGGTTCCCCACCACCGCTGCCGAGACCATTGTCACCATACGACCCGA
AGACGTCCGTTTTACCGGCTTCGTTGAAGAGTTCGGGGCATCAGGATAAA
GCAGAAGGGGATTTTGTTGAGCGCAGCTCCATGTCATTGCACTCTCCCCG
AAGCGCAAGCGTGACACAGCGATCGAAGAAGATTATATAGTCTAAGTGTC
ACGGATAAGCTCGTGCGATTGAACAGTTGTAGCCTCTGGCCTTATATATT
GTAGACGGCATGGTTGACTAAATGTATG back to topCoding sequence (CDS) from alignment at ch5:129738..130765- >KJC3_006700-T1 ID=KJC3_006700-T1|Name=KJC3_006700-T1|organism=Aspergillus niger KJC3|type=CDS|length=873bp|location=Sequence derived from alignment at ch5:129738..130765- (Aspergillus niger KJC3)
ATGTCCCGACCTGTTTCTCCCGCAACCTCCATTGGTACTCACATATCAGG
AATTTCCCATCCCCCTGGTTCGCGCAAACGCCGTCGCATCTCCGTTCTGA
ACGGTATCTCCGGTGATGAACTTTTAAATCGAATTAGTGATTGGGATGAT
GGACAAAAGTCAGCTTCATCAATATCACATACGTCTCGGAGTTCCCTGTC
TTTGTCTGCGATTTCCCCAGCGACTCCCAAGGAGGATAACAAAGCAACAC
GAGTCCCTGCACCATCCGTGCTGGTCGATCCCCTACCGCGTGGACATCTT
GACGACCCATTCGACTGGTACGAGGATATCGAGGAAGCTCAGGTTCCCAC
TGAGCTCGACAAGTTAAGGAATGACTATCAAGCCGAACTAAAAGCCAGTC
ACAGCCGCATTGCTCGCTTGGTGCGACAGATCAACGTTCTGCAAGGGAAT
ATCCGGCTGCAGGCCGCAGAAATTCGATTTCTCAGGGAGCAAAGGGACCA
CTTTCGCGACATGCAGAGTAACTCCAATGCCGACCCCAAACTGCGCTCGA
ACTGGGACTCCGAGCAACAGCAGGAACTAATCCAGCTGCAAGCTGAGCAG
GTCCAGTCCCTCACCGCTGAAAGAGACTACTATCGCCACGAGCGAGACTA
CTACCGTGACCGTATTCCTCGCTTAACTTCGCTGACTGGTTCCCCACCAC
CGCTGCCGAGACCATTGTCACCATACGACCCGAAGACGTCCGTTTTACCG
GCTTCGTTGAAGAGTTCGGGGCATCAGGATAAAGCAGAAGGGGATTTTGT
TGAGCGCAGCTCCATGTCATTGCACTCTCCCCGAAGCGCAAGCGTGACAC
AGCGATCGAAGAAGATTATATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006700-T1.utr3p1 | KJC3_006700-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006700-T1.utr5p1 | KJC3_006700-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:129738..130765 - |
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