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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:161615..163406- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006708-T1 ID=KJC3_006708-T1|Name=KJC3_006708-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1792bp|location=Sequence derived from alignment at ch5:161615..163406- (Aspergillus niger KJC3)
CCTCACGGCCGGCTGATAAGCCTGTTCCTGTCCATTCTCGTTTATGCATA
AAGCAGACCGTCTTTCTCCCTTCCCTCCTTGCGTCGTCACCTCTTGAAAA
CACCCCTCCCTCCACCCTCCCCTTCCTATCCTCCTAGCTCTAACATACAT
CTGCCGTCGGGAGGAACCATGATCGCCCAAGCCTCGGATCCGCCCCCGAA
AGCCCCAAAGCCGGTTACACGCGACTCGATCACCGACGATGCTTCCCACA
TCAACCGCTACGGCTCTGTCCCGGGGGTCGTCGAGGATGTCGTCCAGGTC
ATTGACCACAAGGCCGAACGGGCTCTCTGTCGTCGCTTCGACTTTCGTAT
ACTTCCGGTGCTCGCATTAATGTGTGCGTGTTGTCCATCCCATCCATCTC
ACCACCTGCTAATAGTTATAGATCTCTTCAATGCCCTGGACAAAGGCAAC
CTCAGTAATGCTGAAACTGCCGGCATGAGCGACGGTAACCTATCCCTCTC
TCTCTGTGTATCGTCCATTGCTAACATCACCAGATCTCAATTTCAAACCC
GGGCAATACAACCTTCTCCTCTCCATCTTTTACGTCCCATATGTCATCTT
CGCGCCTCCCTTCGCTATGCTCGGCAAACGTTGGAGTCCCGCCCGCGTAC
TCCCCGTCCTTATGTTCTCCTTTGGTTCCTTCACGCTGCTGTCGTCCGCG
ACCAAGAATTTCGGTGGCATGTTCGCTCTGCGCTGGTTCCTCGGCACGTC
CGAAGCGGCCTTCTTCCCACTAGTCATCTACTACCTCACAACCTTCTACC
GGCGTGCCGAGCTCGCCCGTCGGCTTGCCATCTTCTACGCAGCCAGCAAC
ATTGCCAATGCCTTCTCCGGCCTACTCGCCTTTGGTGTCTTCCAAATCAA
AGACTCCTCGCTCCCGGACTGGCGGTACCTGTTCATCCTTGAAGGTGGTG
TCACCGTCCTCTTCTCCTGCTTCGCGTTCTGGTACCTCCCGCGGTCTGCT
TCGACAGCGTCCTTCCTCAGCGAAGACGAGAAGCTCCTCGCCCACCACCG
CATCCAAGTCGACAGTTCCGCCATCGTCGACGAGCCGTTCCGCCTCCGCT
CCGCTCTCGGTATCTTTTCCCACCCCTCCACATATGCCTTCCTCGCCATT
GAAATCTGTCTCGGTGTGCCCCTGCAGGGCGTCTCCCTCTTCATGCCCCA
GATCATCCAACGTCTGGGCTTCTCCACCGTCAAAACAAACCTCTACACAG
TGGCCCCTAACGTCACCGGAGCAGCCATGCTCATTATTCTCGCCTTCGCA
TCCGATGCCGTCCGCCTTCGTGCCCCATTCATCGTCCTAGGCTTCCTCCT
CACCTTCACGGGCTTCATGATCTATGCCGCTATCGATGACGTCGATCGCC
AGATCCACTTAGCGTACTTTGCCACCTTCATGATGACCTGGGGGACCTCC
GCACCGTCCGTGCTGCTCTCCACCTGGTACAACAACAACATTGCAGACGA
GAACAAGCGTGTGCTGCTGACGAGTATCGGCGTGCCGTTGGCGAACTTGA
TGGGCCTGGTGTCGAGCAATGTCTTCCGGGAGAAGGATAAGCCAAAGTAC
CTGCCTGCCCTCGTAACGGTGGGTGCATTCGGAGGTACGGGTGCTATTCT
GGCCTCGCTATTGGGCGTCTATATGCTTTTGGATAATCGAAGGAGGGATC
GTAAAGAGGGAGTCAGGATGCGGGCGCAGGATGTCCCAACTGAAAGGTTG
CGCGATGGGCCGGGGGCTGTTGGGTTCCGGTGGTTCTTATGA back to topCoding sequence (CDS) from alignment at ch5:161615..163406- >KJC3_006708-T1 ID=KJC3_006708-T1|Name=KJC3_006708-T1|organism=Aspergillus niger KJC3|type=CDS|length=4581bp|location=Sequence derived from alignment at ch5:161615..163406- (Aspergillus niger KJC3)
ATCTCAATTTCAAACCCGGGCAATACAACCTTCTCCTCTCCATCTTTTAC
GTCCCATATGTCATCTTCGCGCCTCCCTTCGCTATGCTCGGCAAACGTTG
GAGTCCCGCCCGCGTACTCCCCGTCCTTATGTTCTCCTTTGGTTCCTTCA
CGCTGCTGTCGTCCGCGACCAAGAATTTCGGTGGCATGTTCGCTCTGCGC
TGGTTCCTCGGCACGTCCGAAGCGGCCTTCTTCCCACTAGTCATCTACTA
CCTCACAACCTTCTACCGGCGTGCCGAGCTCGCCCGTCGGCTTGCCATCT
TCTACGCAGCCAGCAACATTGCCAATGCCTTCTCCGGCCTACTCGCCTTT
GGTGTCTTCCAAATCAAAGACTCCTCGCTCCCGGACTGGCGGTACCTGTT
CATCCTTGAAGGTGGTGTCACCGTCCTCTTCTCCTGCTTCGCGTTCTGGT
ACCTCCCGCGGTCTGCTTCGACAGCGTCCTTCCTCAGCGAAGACGAGAAG
CTCCTCGCCCACCACCGCATCCAAGTCGACAGTTCCGCCATCGTCGACGA
GCCGTTCCGCCTCCGCTCCGCTCTCGGTATCTTTTCCCACCCCTCCACAT
ATGCCTTCCTCGCCATTGAAATCTGTCTCGGTGTGCCCCTGCAGGGCGTC
TCCCTCTTCATGCCCCAGATCATCCAACGTCTGGGCTTCTCCACCGTCAA
AACAAACCTCTACACAGTGGCCCCTAACGTCACCGGAGCAGCCATGCTCA
TTATTCTCGCCTTCGCATCCGATGCCGTCCGCCTTCGTGCCCCATTCATC
GTCCTAGGCTTCCTCCTCACCTTCACGGGCTTCATGATCTATGCCGCTAT
CGATGACGTCGATCGCCAGATCCACTTAGCGTACTTTGCCACCTTCATGA
TGACCTGGGGGACCTCCGCACCGTCCGTGCTGCTCTCCACCTGGTACAAC
AACAACATTGCAGACGAGAACAAGCGTGTGCTGCTGACGAGTATCGGCGT
GCCGTTGGCGAACTTGATGGGCCTGGTGTCGAGCAATGTCTTCCGGGAGA
AGGATAAGCCAAAGTACCTGCCTGCCCTCGTAACGGTGGGTGCATTCGGA
GGTACGGGTGCTATTCTGGCCTCGCTATTGGGCGTCTATATGCTTTTGGA
TAATCGAAGGAGGGATCGTAAAGAGGGAGTCAGGATGCGGGCGCAGGATG
TCCCAACTGAAAGGTTGCGCGATGGGCCGGGGGCTGTTGGGTTCCGGTGG
TTCTTATGAATCTCTTCAATGCCCTGGACAAAGGCAACCTCAGTAATGCT
GAAACTGCCGGCATGAGCGACGATGATCGCCCAAGCCTCGGATCCGCCCC
CGAAAGCCCCAAAGCCGGTTACACGCGACTCGATCACCGACGATGCTTCC
CACATCAACCGCTACGGCTCTGTCCCGGGGGTCGTCGAGGATGTCGTCCA
GGTCATTGACCACAAGGCCGAACGGGCTCTCTGTCGTCGCTTCGACTTTC
GTATACTTCCGGTGCTCGCATTAATGTATCTCAATTTCAAACCCGGGCAA
TACAACCTTCTCCTCTCCATCTTTTACGTCCCATATGTCATCTTCGCGCC
TCCCTTCGCTATGCTCGGCAAACGTTGGAGTCCCGCCCGCGTACTCCCCG
TCCTTATGTTCTCCTTTGGTTCCTTCACGCTGCTGTCGTCCGCGACCAAG
AATTTCGGTGGCATGTTCGCTCTGCGCTGGTTCCTCGGCACGTCCGAAGC
GGCCTTCTTCCCACTAGTCATCTACTACCTCACAACCTTCTACCGGCGTG
CCGAGCTCGCCCGTCGGCTTGCCATCTTCTACGCAGCCAGCAACATTGCC
AATGCCTTCTCCGGCCTACTCGCCTTTGGTGTCTTCCAAATCAAAGACTC
CTCGCTCCCGGACTGGCGGTACCTGTTCATCCTTGAAGGTGGTGTCACCG
TCCTCTTCTCCTGCTTCGCGTTCTGGTACCTCCCGCGGTCTGCTTCGACA
GCGTCCTTCCTCAGCGAAGACGAGAAGCTCCTCGCCCACCACCGCATCCA
AGTCGACAGTTCCGCCATCGTCGACGAGCCGTTCCGCCTCCGCTCCGCTC
TCGGTATCTTTTCCCACCCCTCCACATATGCCTTCCTCGCCATTGAAATC
TGTCTCGGTGTGCCCCTGCAGGGCGTCTCCCTCTTCATGCCCCAGATCAT
CCAACGTCTGGGCTTCTCCACCGTCAAAACAAACCTCTACACAGTGGCCC
CTAACGTCACCGGAGCAGCCATGCTCATTATTCTCGCCTTCGCATCCGAT
GCCGTCCGCCTTCGTGCCCCATTCATCGTCCTAGGCTTCCTCCTCACCTT
CACGGGCTTCATGATCTATGCCGCTATCGATGACGTCGATCGCCAGATCC
ACTTAGCGTACTTTGCCACCTTCATGATGACCTGGGGGACCTCCGCACCG
TCCGTGCTGCTCTCCACCTGGTACAACAACAACATTGCAGACGAGAACAA
GCGTGTGCTGCTGACGAGTATCGGCGTGCCGTTGGCGAACTTGATGGGCC
TGGTGTCGAGCAATGTCTTCCGGGAGAAGGATAAGCCAAAGTACCTGCCT
GCCCTCGTAACGGTGGGTGCATTCGGAGGTACGGGTGCTATTCTGGCCTC
GCTATTGGGCGTCTATATGCTTTTGGATAATCGAAGGAGGGATCGTAAAG
AGGGAGTCAGGATGCGGGCGCAGGATGTCCCAACTGAAAGGTTGCGCGAT
GGGCCGGGGGCTGTTGGGTTCCGGTGGTTCTTATGAATCTCTTCAATGCC
CTGGACAAAGGCAACCTCAGTAATGCTGAAACTGCCGGCATGAGCGACGA
TGATCGCCCAAGCCTCGGATCCGCCCCCGAAAGCCCCAAAGCCGGTTACA
CGCGACTCGATCACCGACGATGCTTCCCACATCAACCGCTACGGCTCTGT
CCCGGGGGTCGTCGAGGATGTCGTCCAGGTCATTGACCACAAGGCCGAAC
GGGCTCTCTGTCGTCGCTTCGACTTTCGTATACTTCCGGTGCTCGCATTA
ATGTATCTCAATTTCAAACCCGGGCAATACAACCTTCTCCTCTCCATCTT
TTACGTCCCATATGTCATCTTCGCGCCTCCCTTCGCTATGCTCGGCAAAC
GTTGGAGTCCCGCCCGCGTACTCCCCGTCCTTATGTTCTCCTTTGGTTCC
TTCACGCTGCTGTCGTCCGCGACCAAGAATTTCGGTGGCATGTTCGCTCT
GCGCTGGTTCCTCGGCACGTCCGAAGCGGCCTTCTTCCCACTAGTCATCT
ACTACCTCACAACCTTCTACCGGCGTGCCGAGCTCGCCCGTCGGCTTGCC
ATCTTCTACGCAGCCAGCAACATTGCCAATGCCTTCTCCGGCCTACTCGC
CTTTGGTGTCTTCCAAATCAAAGACTCCTCGCTCCCGGACTGGCGGTACC
TGTTCATCCTTGAAGGTGGTGTCACCGTCCTCTTCTCCTGCTTCGCGTTC
TGGTACCTCCCGCGGTCTGCTTCGACAGCGTCCTTCCTCAGCGAAGACGA
GAAGCTCCTCGCCCACCACCGCATCCAAGTCGACAGTTCCGCCATCGTCG
ACGAGCCGTTCCGCCTCCGCTCCGCTCTCGGTATCTTTTCCCACCCCTCC
ACATATGCCTTCCTCGCCATTGAAATCTGTCTCGGTGTGCCCCTGCAGGG
CGTCTCCCTCTTCATGCCCCAGATCATCCAACGTCTGGGCTTCTCCACCG
TCAAAACAAACCTCTACACAGTGGCCCCTAACGTCACCGGAGCAGCCATG
CTCATTATTCTCGCCTTCGCATCCGATGCCGTCCGCCTTCGTGCCCCATT
CATCGTCCTAGGCTTCCTCCTCACCTTCACGGGCTTCATGATCTATGCCG
CTATCGATGACGTCGATCGCCAGATCCACTTAGCGTACTTTGCCACCTTC
ATGATGACCTGGGGGACCTCCGCACCGTCCGTGCTGCTCTCCACCTGGTA
CAACAACAACATTGCAGACGAGAACAAGCGTGTGCTGCTGACGAGTATCG
GCGTGCCGTTGGCGAACTTGATGGGCCTGGTGTCGAGCAATGTCTTCCGG
GAGAAGGATAAGCCAAAGTACCTGCCTGCCCTCGTAACGGTGGGTGCATT
CGGAGGTACGGGTGCTATTCTGGCCTCGCTATTGGGCGTCTATATGCTTT
TGGATAATCGAAGGAGGGATCGTAAAGAGGGAGTCAGGATGCGGGCGCAG
GATGTCCCAACTGAAAGGTTGCGCGATGGGCCGGGGGCTGTTGGGTTCCG
GTGGTTCTTATGAATCTCTTCAATGCCCTGGACAAAGGCAACCTCAGTAA
TGCTGAAACTGCCGGCATGAGCGACGATGATCGCCCAAGCCTCGGATCCG
CCCCCGAAAGCCCCAAAGCCGGTTACACGCGACTCGATCACCGACGATGC
TTCCCACATCAACCGCTACGGCTCTGTCCCGGGGGTCGTCGAGGATGTCG
TCCAGGTCATTGACCACAAGGCCGAACGGGCTCTCTGTCGTCGCTTCGAC
TTTCGTATACTTCCGGTGCTCGCATTAATGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006708-T1.utr5p1 | KJC3_006708-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:161615..163406 - |
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