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KJC3_006725-T1, KJC3_006725-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006725-T1
Unique NameKJC3_006725-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:210028..211674+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006725-T1 ID=KJC3_006725-T1|Name=KJC3_006725-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1647bp|location=Sequence derived from alignment at ch5:210028..211674+ (Aspergillus niger KJC3)
ATGCTACTCAACATGAAGGATGTCAATCCCGACGAGCAGGACCATTGGGG
TGGAACACCATTATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCA
AGTTGTTGCTTGCCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGG
GGAGACACCCCGGCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGT
GATGTTACTACTCAATACTGAAGTTGTCGATCCTCATTCCCAGAATAGTC
ATGGCTGGACCATCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTA
GTCGAATTCCTGCTTGCTACCCCGGGAATTGACCCAGATCTTAGAGACTC
TGACGGATTTACTCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAG
TAGTCTCACTACTGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCC
AATTGCCGAGAGACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGC
AATCGTCAAGTTGCTTATTACCGCAGGTGCAAACATCCATACTCGAGACG
ACATGGGAGCCACGGCACTCATGTATGGCGCGAAAACCGGAAATCTGGAA
CTCGTCGAAGCGCTTCTTGCTGCAGGTGCAGACATTCACGTCCGAAATAA
TGACGGTGCGACTGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAA
TTGTTGAAACACTTCTGGCTGTAGGCGCAGATGTTCACATTGCAGATAAC
GATGGAACGACAGCACTCATACACGCTGTTGGATCCGGAAATGTGAAAGT
GGTTGAAGCGCTTGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACT
GGAGACAAACACCACTTTTTTACTCTGTACTGCATAGAAGCTGGGAGGTT
CTTAGCTTCCTTATTGCTAAAGGTGCAGGGATTGACATCCAAACTACTGA
TGGGGAGACAGCACTCACTCAGGCTTCGAGTTATGGATATGATGTGAAAA
TAGTTAAAGCGCTTATTGCTGCAGGAGCAGGACTGGACATCAGAGTCAAC
AGCAGTGATGAATATGGAGGCACACCCCTTCTGAATGCGGTTAATTGTAA
GGCAGAAGTAGTGGTTGAAGCTCTGCTTTCTGCAGGCGCCATGCCTGATA
TCGGGAATAGCCGAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGA
CATCCGAAGATATTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACAT
TGCTGATCGTGAAGGATGGACTCCGTTGGCATACCTATCACGATTTCGTC
AGGACAATGTCCAACTTTTCAAATTACTTCTTGCTGCGGGTGTGAATGTT
AATGTCAAAACCGAGGATGGATGGACGCCATTGGCGCTAGCAGCTAATTG
CGGTAGTCTAGAGGCGGTAAAGATTTTACTTGCAGCGGGGGCAGACCCAA
ACTCTGGAACACCCCTAACAAAAGCAGCGTTTCACGAGCACCTGGAGATT
GTGAAAACACTTCTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAG
TGACTGGCTGCCAGCGCTGTGGATAGACAGACAGCCGGGCTATTCGAGAG
CGGCGGACTTGATACATCAGCACAGAATGCTTAAAATTATGGTTTAA
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Coding sequence (CDS) from alignment at ch5:210028..211674+

>KJC3_006725-T1 ID=KJC3_006725-T1|Name=KJC3_006725-T1|organism=Aspergillus niger KJC3|type=CDS|length=1647bp|location=Sequence derived from alignment at ch5:210028..211674+ (Aspergillus niger KJC3)
ATGCTACTCAACATGAAGGATGTCAATCCCGACGAGCAGGACCATTGGGG
TGGAACACCATTATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCA
AGTTGTTGCTTGCCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGG
GGAGACACCCCGGCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGT
GATGTTACTACTCAATACTGAAGTTGTCGATCCTCATTCCCAGAATAGTC
ATGGCTGGACCATCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTA
GTCGAATTCCTGCTTGCTACCCCGGGAATTGACCCAGATCTTAGAGACTC
TGACGGATTTACTCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAG
TAGTCTCACTACTGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCC
AATTGCCGAGAGACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGC
AATCGTCAAGTTGCTTATTACCGCAGGTGCAAACATCCATACTCGAGACG
ACATGGGAGCCACGGCACTCATGTATGGCGCGAAAACCGGAAATCTGGAA
CTCGTCGAAGCGCTTCTTGCTGCAGGTGCAGACATTCACGTCCGAAATAA
TGACGGTGCGACTGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAA
TTGTTGAAACACTTCTGGCTGTAGGCGCAGATGTTCACATTGCAGATAAC
GATGGAACGACAGCACTCATACACGCTGTTGGATCCGGAAATGTGAAAGT
GGTTGAAGCGCTTGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACT
GGAGACAAACACCACTTTTTTACTCTGTACTGCATAGAAGCTGGGAGGTT
CTTAGCTTCCTTATTGCTAAAGGTGCAGGGATTGACATCCAAACTACTGA
TGGGGAGACAGCACTCACTCAGGCTTCGAGTTATGGATATGATGTGAAAA
TAGTTAAAGCGCTTATTGCTGCAGGAGCAGGACTGGACATCAGAGTCAAC
AGCAGTGATGAATATGGAGGCACACCCCTTCTGAATGCGGTTAATTGTAA
GGCAGAAGTAGTGGTTGAAGCTCTGCTTTCTGCAGGCGCCATGCCTGATA
TCGGGAATAGCCGAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGA
CATCCGAAGATATTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACAT
TGCTGATCGTGAAGGATGGACTCCGTTGGCATACCTATCACGATTTCGTC
AGGACAATGTCCAACTTTTCAAATTACTTCTTGCTGCGGGTGTGAATGTT
AATGTCAAAACCGAGGATGGATGGACGCCATTGGCGCTAGCAGCTAATTG
CGGTAGTCTAGAGGCGGTAAAGATTTTACTTGCAGCGGGGGCAGACCCAA
ACTCTGGAACACCCCTAACAAAAGCAGCGTTTCACGAGCACCTGGAGATT
GTGAAAACACTTCTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAG
TGACTGGCTGCCAGCGCTGTGGATAGACAGACAGCCGGGCTATTCGAGAG
CGGCGGACTTGATACATCAGCACAGAATGCTTAAAATTATGGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006725KJC3_006725Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006725-T1.exon1KJC3_006725-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006725-T1.cdsKJC3_006725-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006725-T1KJC3_006725-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:210028..211674 +
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