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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:214511..216130+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006727-T1 ID=KJC3_006727-T1|Name=KJC3_006727-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch5:214511..216130+ (Aspergillus niger KJC3)
ATGTCGAATGTTTCCATTTGCTCCCCCGCGGCCATTCAGACCCCGGTCGT
GTACGGGGCTGAGATCCTTTCTCTTTCGGCCGCTTGGGTCACAAATTATA
CCGATTACATACCGTCCTCGTTCAACTACAACGGAGGAACTGTCGACCTA
GAAAATGCCAAATTCTGCAACATCACCGTGAAATACACTCATCCCGGCTA
CGAGGATAACATTACCGTTGAGACCTGGCTTCCCGAAGCGGCCAACTGGA
ACGGCCGCCTGCAGGCAACAGGAGGCGGTGGTTGGGCTGCTGGCCGGTTT
GTGCTGTCCGAGTTCTTCATGGGGGGTGCAATTGGGGAAGGATTTGCTAC
AACCACAACCGATGCAGGACTGGGCAAGGATACTACAGGACCCCGTGAAT
GGGCGCTCACCAGCCCGGGCAATGTTGATTGGGTGGCAGTGGAAAACTTC
GGATCCCGTGCATTCAGTGACCAAGCCATCATTGGCAAGAGCCTTATAAA
TAGCTTCTACGGTCGTGCCCCGGAGTATTCTTACTGGAGCGGTTGCTCTC
AGGGAGGCCGGCAGGGAATGATGATCGCTGAACGCTATCCCACTGCATAC
GATGGCATTGCTGCCTCAGCTCCCGCTCAGTCCTTCACCAAATTCACTTC
TTCGCTCTATTATCCTCTCCTCATGCGCATCTGGCATAATGTGAAACCGC
TGGTCTGCGAACTGGACTTCCTTACAAGCGAGGCCATCAAGTACTGTGAC
CCCCTCGATGGTGTGGTAGATGGACTCATCTCTAACATGACCGCCTGTGA
CTACAACCCCTATACTGCCGTGAATAAGACTTTCACCTGTGACTCCTTGA
ACCGTACTATTGCACTCAGTCAGGGCGCTGCGCTCATCGCTGAGGCTGCC
TGGTCGGGCGCGCACACCACAGACGGCCACCAGCTCTGGTTCGGATACAA
CCCAGGGTCCGACATCGGTAGTACCTTTGGTGCTCAACCGGAAACCAACA
TCTCATCGCTTGCCACCACCAAGGATGAATGGTTTAATCTTTTTGTCGCT
AAGAATATCAGCTTCAACACCATGGGCTTGAGCCACGAGGAGTACCAGGA
GTTTTTCAACCTCATCACTTCAGAGTATGGTAGTGCCTGGAACGCAGATG
ATGCCAACTTGCAGGCTTTCAAAAAGAACGGAGGCAAGCTGCTAACCTAC
CATGGCATGGTACGTCTCTCTCCCTATCCTCTCCCCCTTCCCGATGATAT
GTTACCAGACCCCTGAGGACAGTAACTAACCCACCGTGCGATTACCCAAC
AGGCCGATCCCAGCATCCCCACCAAGGGCACCGAATATCTCTACAACAAG
GCGCGGGCACTCTTCCCGGACGTTCAGGACTTCTGGCGCTTCTTCGAGTC
TCCCGGTCTGGGTCACTGCGCCGGCGGCCTCGGCGGCCAGCCGACCACCG
TCATGAAGGCTCTTCAGCGTTGGGTCGAAAATGGCACTGCCCCGGACACC
TTGCCTGTGGAATACCCGTCGCTCGGAACTGCTCTCCACCGAAACCTGTG
CCCTTATCCTTCCCAGATTGAATACATTGGTGGTAATATCTCTTTGGCTG
AGAGCTTCCGTTGCACTTAG back to topCoding sequence (CDS) from alignment at ch5:214511..216130+ >KJC3_006727-T1 ID=KJC3_006727-T1|Name=KJC3_006727-T1|organism=Aspergillus niger KJC3|type=CDS|length=3054bp|location=Sequence derived from alignment at ch5:214511..216130+ (Aspergillus niger KJC3)
ATGTCGAATGTTTCCATTTGCTCCCCCGCGGCCATTCAGACCCCGGTCGT
GTACGGGGCTGAGATCCTTTCTCTTTCGGCCGCTTGGGTCACAAATTATA
CCGATTACATACCGTCCTCGTTCAACTACAACGGAGGAACTGTCGACCTA
GAAAATGCCAAATTCTGCAACATCACCGTGAAATACACTCATCCCGGCTA
CGAGGATAACATTACCGTTGAGACCTGGCTTCCCGAAGCGGCCAACTGGA
ACGGCCGCCTGCAGGCAACAGGAGGCGGTGGTTGGGCTGCTGGCCGGTTT
GTGCTGTCCGAGTTCTTCATGGGGGGTGCAATTGGGGAAGGATTTGCTAC
AACCACAACCGATGCAGGACTGGGCAAGGATACTACAGGACCCCGTGAAT
GGGCGCTCACCAGCCCGGGCAATGTTGATTGGGTGGCAGTGGAAAACTTC
GGATCCCGTGCATTCAGTGACCAAGCCATCATTGGCAAGAGCCTTATAAA
TAGCTTCTACGGTCGTGCCCCGGAGTATTCTTACTGGAGCGGTTGCTCTC
AGGGAGGCCGGCAGGGAATGATGATCGCTGAACGCTATCCCACTGCATAC
GATGGCATTGCTGCCTCAGCTCCCGCTCAGTCCTTCACCAAATTCACTTC
TTCGCTCTATTATCCTCTCCTCATGCGCATCTGGCATAATGTGAAACCGC
TGGTCTGCGAACTGGACTTCCTTACAAGCGAGGCCATCAAGTACTGTGAC
CCCCTCGATGGTGTGGTAGATGGACTCATCTCTAACATGACCGCCTGTGA
CTACAACCCCTATACTGCCGTGAATAAGACTTTCACCTGTGACTCCTTGA
ACCGTACTATTGCACTCAGTCAGGGCGCTGCGCTCATCGCTGAGGCTGCC
TGGTCGGGCGCGCACACCACAGACGGCCACCAGCTCTGGTTCGGATACAA
CCCAGGGTCCGACATCGGTAGTACCTTTGGTGCTCAACCGGAAACCAACA
TCTCATCGCTTGCCACCACCAAGGATGAATGGTTTAATCTTTTTGTCGCT
AAGAATATCAGCTTCAACACCATGGGCTTGAGCCACGAGGAGTACCAGGA
GTTTTTCAACCTCATCACTTCAGAGTATGGTAGTGCCTGGAACGCAGATG
ATGCCAACTTGCAGGCTTTCAAAAAGAACGGAGGCAAGCTGCTAACCTAC
CATGGCATGGCCGATCCCAGCATCCCCACCAAGGGCACCGAATATCTCTA
CAACAAGGCGCGGGCACTCTTCCCGGACGTTCAGGACTTCTGGCGCTTCT
TCGAGTCTCCCGGTCTGGGTCACTGCGCCGGCGGCCTCGGCGGCCAGCCG
ACCACCGTCATGAAGGCTCTTCAGCGTTGGGTCGAAAATGGCACTGCCCC
GGACACCTTGCCTGTGGAATACCCGTCGCTCGGAACTGCTCTCCACCGAA
ACCTGTGCCCTTATCCTTCCCAGATTGAATACATTGGTGGTAATATCTCT
TTGGCTGAGAGCTTCCGTTGCACTTAGATGTCGAATGTTTCCATTTGCTC
CCCCGCGGCCATTCAGACCCCGGTCGTGTACGGGGCTGAGATCCTTTCTC
TTTCGGCCGCTTGGGTCACAAATTATACCGATTACATACCGTCCTCGTTC
AACTACAACGGAGGAACTGTCGACCTAGAAAATGCCAAATTCTGCAACAT
CACCGTGAAATACACTCATCCCGGCTACGAGGATAACATTACCGTTGAGA
CCTGGCTTCCCGAAGCGGCCAACTGGAACGGCCGCCTGCAGGCAACAGGA
GGCGGTGGTTGGGCTGCTGGCCGGTTTGTGCTGTCCGAGTTCTTCATGGG
GGGTGCAATTGGGGAAGGATTTGCTACAACCACAACCGATGCAGGACTGG
GCAAGGATACTACAGGACCCCGTGAATGGGCGCTCACCAGCCCGGGCAAT
GTTGATTGGGTGGCAGTGGAAAACTTCGGATCCCGTGCATTCAGTGACCA
AGCCATCATTGGCAAGAGCCTTATAAATAGCTTCTACGGTCGTGCCCCGG
AGTATTCTTACTGGAGCGGTTGCTCTCAGGGAGGCCGGCAGGGAATGATG
ATCGCTGAACGCTATCCCACTGCATACGATGGCATTGCTGCCTCAGCTCC
CGCTCAGTCCTTCACCAAATTCACTTCTTCGCTCTATTATCCTCTCCTCA
TGCGCATCTGGCATAATGTGAAACCGCTGGTCTGCGAACTGGACTTCCTT
ACAAGCGAGGCCATCAAGTACTGTGACCCCCTCGATGGTGTGGTAGATGG
ACTCATCTCTAACATGACCGCCTGTGACTACAACCCCTATACTGCCGTGA
ATAAGACTTTCACCTGTGACTCCTTGAACCGTACTATTGCACTCAGTCAG
GGCGCTGCGCTCATCGCTGAGGCTGCCTGGTCGGGCGCGCACACCACAGA
CGGCCACCAGCTCTGGTTCGGATACAACCCAGGGTCCGACATCGGTAGTA
CCTTTGGTGCTCAACCGGAAACCAACATCTCATCGCTTGCCACCACCAAG
GATGAATGGTTTAATCTTTTTGTCGCTAAGAATATCAGCTTCAACACCAT
GGGCTTGAGCCACGAGGAGTACCAGGAGTTTTTCAACCTCATCACTTCAG
AGTATGGTAGTGCCTGGAACGCAGATGATGCCAACTTGCAGGCTTTCAAA
AAGAACGGAGGCAAGCTGCTAACCTACCATGGCATGGCCGATCCCAGCAT
CCCCACCAAGGGCACCGAATATCTCTACAACAAGGCGCGGGCACTCTTCC
CGGACGTTCAGGACTTCTGGCGCTTCTTCGAGTCTCCCGGTCTGGGTCAC
TGCGCCGGCGGCCTCGGCGGCCAGCCGACCACCGTCATGAAGGCTCTTCA
GCGTTGGGTCGAAAATGGCACTGCCCCGGACACCTTGCCTGTGGAATACC
CGTCGCTCGGAACTGCTCTCCACCGAAACCTGTGCCCTTATCCTTCCCAG
ATTGAATACATTGGTGGTAATATCTCTTTGGCTGAGAGCTTCCGTTGCAC
TTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR011118 |
| DBxref | PFAM:PF07519 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:214511..216130 + |
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