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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:259334..261318+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006745-T1 ID=KJC3_006745-T1|Name=KJC3_006745-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1985bp|location=Sequence derived from alignment at ch5:259334..261318+ (Aspergillus niger KJC3)
CCGAGATGTACTAATCGTTGTATTCTGTGCCTCTGCATTGGCCCCGACGT
CATTGGCTACTCTGATTCCCAGCACCTGTTATAAAGGGTCACCTTGGCCT
TCTCATTGTGCGGCTTTCTCCCTTCCTTTCTCCAGGAAGAAGAATCCAGC
GACAATCCCTCAACATGGCCACCGAAAAGAAAGACATTGAAGACGTGCCG
CAGCAACCCGAATACGTCCATGATGATGTATTCGGAGAGATCTCGGAGCA
CGGTCCCAACTTTCGCAATGTTTATACAAGCAGTTCTCATTGAAAAAAAG
TCCCAGAAGCTAATTGGTTCAACTAGGTCGGGTTCATAGGAACCGTCATC
CTCATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTGC
TCTGGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCT
ACTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAAC
CACCGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCCC
TTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTGTACGTGGCCCT
CATGAACTAGTCGAAGCAATATAATGCTAATGGTAGGAATTGATACCATA
CAGACTACGTTTTCACGAGCGGTTCGGCTATTCTTGGACTTTCCATTGGC
TTGAACGCCGTGTCTACCCATGCAACATGCACGGCAGTCTTCACCGCCGT
TGCAGCCATTGCCGGGTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCA
TCACTGCGGTTGCATGGGTGGGCCTACCATGTATCCTTACAGCCGGTACT
TTCCCCAGCGATACATCTCCTGCATGATGCACTGACGGTACCTAGTGATT
ATTGTTACTGTCGGAGTCGGTATAGAGGACCGCCCCGCTGACGCGCCCAA
AACGGACGGTCCTTGGGTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTT
TTGCTGATGGAATTGCAGCTGTATCTAATCTGCTATTTTCCTTTACAGGA
ATCCCAGGTGGGTTAATTGCCGTTTTCCTGGCTCTTTTCGGCATCCTATC
ACACGCTAATATCCTTCACTTCCAGCATTCTTTTCCATCGTTTCCGAGAT
GCGTGACCCCCACCAATACACCAAAGCCGTGGTGGTAAGTCAGACCGGGG
TCTTCGCCGTATATGCCATAATCGGCGGAGTGGTGTACTATTACTGCGGT
ACCTACGTTTCATCACCGGCCCTTGGTTCAGCTGGTGGTGTTGTGAAGAT
CATCAGCTACGCATTTGCACTGCCCGGCCTCTTAGCCACACTCACCATCG
TCGCACATGTAAGAGAAACCCAAAGAATCAGAGGAAAAGAAGCCCGATTG
GGATATACACCTCAATATGCTAACAAAATCCTCTCGTAAACCCACCAAAG
ATCCCCGCAAAATTCATATTCGTCAATATCCTCCGCGGCTCGCGCCATCT
CACCAGCAACTCGCCCACGCACTGGATCACCTGGCTGAGCTGTACGTTCG
GGATCATCCTAATTGCTTGGATCATTGCCAGCACAATACCCATCTTTGAT
GCCTTGGTTTCTCTCATCGGGGCTTTACTTGGTCCGCTTATCTGCATTCA
GCCGATGGGTGCGATGTGGCTGTACGATAACTGGAGGAAGGGGAAGGATG
CGGCGCATAAGTCGAAACGGTGGATGTTTATGGTAGTGTGGAGTGTGCTA
ATAATACTCATTGGGTCATTCATGATGGTTGCGGGAACTTACGGGTCTGT
TGAGTACATCATGGCGTCTTATGCCGAGGATGGGGGATCGGCTGCTTTTT
CGTGTGCTGATAATTCGAATTCTGTTTGAGTGGATGCGCGTCATGAAGGA
GATAGAGTTTGTCTTCGGGAGACGAGATATGTACAGGATACATACCATGA
ACCATAGATAAAGATACAAACACTAGAAATGTGCT back to topCoding sequence (CDS) from alignment at ch5:259334..261318+ >KJC3_006745-T1 ID=KJC3_006745-T1|Name=KJC3_006745-T1|organism=Aspergillus niger KJC3|type=CDS|length=6255bp|location=Sequence derived from alignment at ch5:259334..261318+ (Aspergillus niger KJC3)
ATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTGCTCT
GGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCTACT
GTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACCAC
CGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCCCTTT
GGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTTTTCACGA
GCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCTACC
CATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCGGGTT
GTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCATGGG
TGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGAGTC
GGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACGGTCCTTGGGT
TTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGAATTGCAG
CTGTATCTAATCTGCTATTTTCCTTTACAGGAATCCCAGCATTCTTTTCC
ATCGTTTCCGAGATGCGTGACCCCCACCAATACACCAAAGCCGTGGTGGT
AAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGAGTGGTGT
ACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCTGGT
GGTGTTGTGAAGATCATCAGCTACGCATTTGCACTGCCCGGCCTCTTAGC
CACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTCGTCAATA
TCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGGATC
ACCTGGCTGAGCTGTACGTTCGGGATCATCCTAATTGCTTGGATCATTGC
CAGCACAATACCCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCTTTAC
TTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGATGTGGCTGTACGAT
AACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGATGTT
TATGGTAGTGTGGAGTGTGCTAATAATACTCATTGGGTCATTCATGATGG
TTGCGGGAACTTACGGGTCTGTTGAGTACATCATGGCGTCTTATGCCGAG
GATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTGTTTG
AATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTGCTC
TGGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCTAC
TGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACCA
CCGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCCCTT
TGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTTTTCACG
AGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCTAC
CCATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCGGGT
TGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCATGG
GTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGAGT
CGGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACGGTCCTTGGG
TTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGAATTGCA
GCTGTATCTAATCTGCTATTTTCCTTTACAGGAATCCCAGCATTCTTTTC
CATCGTTTCCGAGATGCGTGACCCCCACCAATACACCAAAGCCGTGGTGG
TAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGAGTGGTG
TACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCTGG
TGGTGTTGTGAAGATCATCAGCTACGCATTTGCACTGCCCGGCCTCTTAG
CCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTCGTCAAT
ATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGGAT
CACCTGGCTGAGCTGTACGTTCGGGATCATCCTAATTGCTTGGATCATTG
CCAGCACAATACCCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCTTTA
CTTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGATGTGGCTGTACGA
TAACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGATGT
TTATGGTAGTGTGGAGTGTGCTAATAATACTCATTGGGTCATTCATGATG
GTTGCGGGAACTTACGGGTCTGTTGAGTACATCATGGCGTCTTATGCCGA
GGATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTGTTT
GAATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTGCT
CTGGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCTA
CTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACC
ACCGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCCCT
TTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTTTTCAC
GAGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCTA
CCCATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCGGG
TTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCATG
GGTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGAG
TCGGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACGGTCCTTGG
GTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGAATTGC
AGCTGTATCTAATCTGCTATTTTCCTTTACAGGAATCCCAGCATTCTTTT
CCATCGTTTCCGAGATGCGTGACCCCCACCAATACACCAAAGCCGTGGTG
GTAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGAGTGGT
GTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCTG
GTGGTGTTGTGAAGATCATCAGCTACGCATTTGCACTGCCCGGCCTCTTA
GCCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTCGTCAA
TATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGGA
TCACCTGGCTGAGCTGTACGTTCGGGATCATCCTAATTGCTTGGATCATT
GCCAGCACAATACCCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCTTT
ACTTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGATGTGGCTGTACG
ATAACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGATG
TTTATGGTAGTGTGGAGTGTGCTAATAATACTCATTGGGTCATTCATGAT
GGTTGCGGGAACTTACGGGTCTGTTGAGTACATCATGGCGTCTTATGCCG
AGGATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTGTT
TGAATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTGC
TCTGGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCT
ACTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAAC
CACCGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCCC
TTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTTTTCA
CGAGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCT
ACCCATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCGG
GTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCAT
GGGTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGA
GTCGGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACGGTCCTTG
GGTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGAATTG
CAGCTGTATCTAATCTGCTATTTTCCTTTACAGGAATCCCAGCATTCTTT
TCCATCGTTTCCGAGATGCGTGACCCCCACCAATACACCAAAGCCGTGGT
GGTAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGAGTGG
TGTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCT
GGTGGTGTTGTGAAGATCATCAGCTACGCATTTGCACTGCCCGGCCTCTT
AGCCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTCGTCA
ATATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGG
ATCACCTGGCTGAGCTGTACGTTCGGGATCATCCTAATTGCTTGGATCAT
TGCCAGCACAATACCCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCTT
TACTTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGATGTGGCTGTAC
GATAACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGAT
GTTTATGGTAGTGTGGAGTGTGCTAATAATACTCATTGGGTCATTCATGA
TGGTTGCGGGAACTTACGGGTCTGTTGAGTACATCATGGCGTCTTATGCC
GAGGATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTGT
TTGAATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCCATCCCATCTG
CTCTGGAAGTTCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATC
TACTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAA
CCACCGCGATGTCTACAGCATTGACGATGCCGGTGGACTCATGTTTGGCC
CTTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTTTTC
ACGAGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTC
TACCCATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCG
GGTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCA
TGGGTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGG
AGTCGGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACGGTCCTT
GGGTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGAATT
GCAGCTGTATCTAATCTGCTATTTTCCTTTACAGGAATCCCAGCATTCTT
TTCCATCGTTTCCGAGATGCGTGACCCCCACCAATACACCAAAGCCGTGG
TGGTAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGAGTG
GTGTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGC
TGGTGGTGTTGTGAAGATCATCAGCTACGCATTTGCACTGCCCGGCCTCT
TAGCCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTCGTC
AATATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTG
GATCACCTGGCTGAGCTGTACGTTCGGGATCATCCTAATTGCTTGGATCA
TTGCCAGCACAATACCCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCT
TTACTTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGATGTGGCTGTA
CGATAACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGA
TGTTTATGGTAGTGTGGAGTGTGCTAATAATACTCATTGGGTCATTCATG
ATGGTTGCGGGAACTTACGGGTCTGTTGAGTACATCATGGCGTCTTATGC
CGAGGATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTG
TTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006745-T1.utr5p1 | KJC3_006745-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006745-T1.utr3p1 | KJC3_006745-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:259334..261318 + |
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