You are here

Home

KJC3_006767-T1, KJC3_006767-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006767-T1
Unique NameKJC3_006767-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:399087..399866-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006767-T1 ID=KJC3_006767-T1|Name=KJC3_006767-T1|organism=Aspergillus niger KJC3|type=mRNA|length=780bp|location=Sequence derived from alignment at ch5:399087..399866- (Aspergillus niger KJC3)
CATTCTCGCGCTACCACCCCCGGTTTCCCGTCCATTGTCTGTCCGGACCC
TGCGGATCTCGGTCTCATTTATCTGACTATTCGATCCGCCGTCTAACTCA
CCACCGACTCACCCCCTCATTCATCGCCAACCCGCTCACCATGGCTCCCA
ACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGG
TCGGCCTGGGCCAAGAAGGACCCCTGGGCTCGCTAGTACGATACTATCCA
CGACCTACTTGGCTATTTCACGTTGTACTAACAGTTCGACCAGCGAGGCC
TGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATCTT
CCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACG
AGCACTTCTTCCTCAAGGATGATCACCACCACCACGGCGAGGGCCACCAC
TAAATCACGATCGAGTGAAGTAAAGGTGCGGAGTTAAAGAAGCCGACATG
CGATGGAAAAAAGATGAAGGATACCCCGGATTGCTGAGATCAATGGCATC
CGTACGTGATTAGAGGGTCACAATGTGTGGTGTACAAGCGGGAGAAGGGA
TTGTCGATTCGATTGGGATAGATTTTTTGTCTCATTATCATGAATGACCC
TTAGCTCTCTACAGACGGCGCTTGGGTTGTTTCATTTGTCGGGTGTACAT
AGTAACTGTTATTTATCACATCAAGTGCATTATTGTTCAAACCTTATGAA
ATGCCGGTTGTGTCGGTATGACCATTCCTC
back to top

Coding sequence (CDS) from alignment at ch5:399087..399866-

>KJC3_006767-T1 ID=KJC3_006767-T1|Name=KJC3_006767-T1|organism=Aspergillus niger KJC3|type=CDS|length=510bp|location=Sequence derived from alignment at ch5:399087..399866- (Aspergillus niger KJC3)
CGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGC
GCATCTTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGC
GCCTACGAGCACTTCTTCCTCAAGGATGATCACCACCACCACGGCGAGGG
CCACCACTAAATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCA
AGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAGAAGGACCCCTGGGCT
CGCTACGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTT
CAAGCGCATCTTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCT
ACTGCGCCTACGAGCACTTCTTCCTCAAGGATGATCACCACCACCACGGC
GAGGGCCACCACTAAATGGCTCCCAACCCCACCGGATTTGACATCAACGA
ATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAGAAGGACCCCT
GGGCTCGCTA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006767KJC3_006767Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006767-T1KJC3_006767-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006767-T1.cdsKJC3_006767-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006767-T1.utr3p1KJC3_006767-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006767-T1.exon2KJC3_006767-T1.exon2Aspergillus niger KJC3exon
KJC3_006767-T1.exon1KJC3_006767-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006767-T1.utr5p1KJC3_006767-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012576
DBxrefPFAM:PF08122
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:399087..399866 -
Powered by Drupal