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KJC3_006788-T1, KJC3_006788-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006788-T1
Unique NameKJC3_006788-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:448659..450515+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006788-T1 ID=KJC3_006788-T1|Name=KJC3_006788-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1857bp|location=Sequence derived from alignment at ch5:448659..450515+ (Aspergillus niger KJC3)
GCTGCGCAACTCATCAGCTTCACGCCCCATCCTCCTTCCCCCATCCTCAT
CTCTTCACCCCATCCACGCACATCGCGAATCCTTCATTACATTCTCCAAA
CACCTGCATAGGTAATCTATATTAGGCCTATTGCTTCTCACAGTTTCGGA
CTATGGTTGGTGCCCAGCGTTGGCCCTTGTTGACAGCTCTTGTCGGCTCC
TGATGTCACTTATCTGACCAATCTTTGCAACAGGGTAACCAGCAGTCCAA
CATCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAGAAGG
TAAGCTATACTCCCGTGTTCATCCTGTCAGTTGGCGGTCGGCTTACAATA
CGCTCCTCTGCAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTA
CGACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCC
TCCAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACGATATCT
CCGAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGG
AGAACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCG
GCGAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAG
CCGGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAG
AGCTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAA
TACTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGG
TGCTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCA
CCGAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCC
ACAGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGT
CCGAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGA
TGGGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACC
GGAAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTT
CCTCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCC
CTCGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCC
ATTGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTC
TACGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTA
ACCAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCC
ACCAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTAT
CGACCGAAAGATTCTCTTCGAAAACCCAGACCGTAAGTCACTGAGTCCAT
ACATTTGTGCCAGATTGCTAACTATGCACAGAAAATACCAAGAAGAAGAT
CTTTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGG
ACGAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCG
ATCTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGT
GCAGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGC
AGGATGGAGGCCCGGTGGAGGGACTGTACTTGTAGGCGTGCAGATATTGA
TGTTGTATTAGATCTTCCCTAGTTGAACCGACATATCGTGGTGGTATTAG
GTCAAGAATCTATCCCAGTGTATCTTTACAATAGTAGCACCAGGTCGCCT
TGGTGGC
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Coding sequence (CDS) from alignment at ch5:448659..450515+

>KJC3_006788-T1 ID=KJC3_006788-T1|Name=KJC3_006788-T1|organism=Aspergillus niger KJC3|type=CDS|length=5568bp|location=Sequence derived from alignment at ch5:448659..450515+ (Aspergillus niger KJC3)
ATGGGTAACCAGCAGTCCAACATCGGCGGAGGCCCCGGTGGCGATGGAAG
GGATGAGAAAGACAAGAAGAAGGACAAGCCCAGATACGAACCACCTCCGC
CGCCTACGACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGT
ACTGCCTCCAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACG
ATATCTCCGAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGT
ACGTGGAGAACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTG
GACTCGGCGAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGA
GAGAAGCCGGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATC
TGGAAGAGCTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGA
CCAGAATACTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGA
GCCTGGTGCTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTG
TGCTCACCGAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAA
GCTCCCACAGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCA
GGAAGTCCGAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACG
AGGAGATGGGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCT
GGTACCGGAAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGC
TACTTTCCTCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAG
ATGGCCCTCGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCC
CCCTCCATTGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTA
TGATTCTACGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGC
TTCTTAACCAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATC
ATGGCCACCAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGG
ACGTATCGACCGAAAGATTCTCTTCGAAAACCCAGACCAAAATACCAAGA
AGAAGATCTTTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTC
GACCTGGACGAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATAT
TCGTGCGATCTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGA
TGCGGGTGCAGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAG
ACGAAGCAGGATGGAGGCCCGGTGGAGGGACTGTACTTGTAGATGGGTAA
CCAGCAGTCCAACATCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGA
AAGACAAGAAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTACG
ACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTC
CAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACGATATCTCC
GAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGGAG
AACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGC
GAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAGCC
GGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAG
CTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAATA
CTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTG
CTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACC
GAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCCAC
AGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCC
GAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGATG
GGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACCGG
AAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTTCC
TCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCCCT
CGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCAT
TGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTCTA
CGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTAAC
CAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCCAC
CAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTATCG
ACCGAAAGATTCTCTTCGAAAACCCAGACCAAAATACCAAGAAGAAGATC
TTTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGGA
CGAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCGA
TCTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTG
CAGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGCA
GGATGGAGGCCCGGTGGAGGGACTGTACTTGTAGATGGGTAACCAGCAGT
CCAACATCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAG
AAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTACGACTCGTCT
CGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTCCAAGCTTC
CGGACATCTTCCCAACGTCACGATGTAAATTACGATATCTCCGAATGCAA
CGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGGAGAACATGGA
GCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGCGAACCGTA
ATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAGCCGGGTTGAC
GACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAGCTGATTGA
CGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAATACTATGTTT
CGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTGCTAGCATT
CTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACCGAAGAATC
CGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCCACAGAATCAT
ATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCCGAGAGTCC
GTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGATGGGTATCAA
GCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACCGGAAAGACGC
TGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTTCCTCCGTATC
GTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCCCTCGTCTGGT
CCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCATTGTTTTCA
TTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTCTACGTCAGGT
GGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTAACCAGCTCGA
TGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCCACCAACAAGA
TTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTATCGACCGAAAG
ATTCTCTTCGAAAACCCAGACCAAAATACCAAGAAGAAGATCTTTACCCT
GCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGGACGAGTTCA
TCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCGATCTGTACT
GAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTGCAGATGGA
CGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGCAGGATGGAG
GCCCGGTGGAGGGACTGTACTTGTAGATGGGTAACCAGCAGTCCAACATC
GGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAGAAGAAGGA
CAAGCCCAGATACGAACCACCTCCGCCGCCTACGACTCGTCTCGGACGTA
AGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTCCAAGCTTCCGGACATC
TTCCCAACGTCACGATGTAAATTACGATATCTCCGAATGCAACGAGTCCA
CGACCATTTGTTGCTAGAGGAAGAGTACGTGGAGAACATGGAGCGCCTGC
GCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGCGAACCGTAATGATCTC
GACATCATGGATCGGAACGCCGATGAGAGAAGCCGGGTTGACGACATGAG
AGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAGCTGATTGACGATGACC
ACGCCATCGTCTCGAGCGCGACTGGACCAGAATACTATGTTTCGATCATG
TCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTGCTAGCATTCTTCTACA
CCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACCGAAGAATCCGACCCCC
TCGTATCAGTGATGAAGCTCGACAAAGCTCCCACAGAATCATATGCCGAT
ATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCCGAGAGTCCGTGGAGCT
TCCCCTGCTGCATCCGGAGCTGTACGAGGAGATGGGTATCAAGCCACCCA
AGGGTGTGATTCTCTACGGTGCCCCTGGTACCGGAAAGACGCTGCTGGCC
AAGGCGGTCGCGAACCAAACCAGTGCTACTTTCCTCCGTATCGTGGGTAG
TGAGCTGATTCAGAAGTACCTTGGAGATGGCCCTCGTCTGGTCCGTCAAA
TCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCATTGTTTTCATTGATGAA
ATCGATGCGATTGGTACGAAGCGTTATGATTCTACGTCAGGTGGTGAACG
AGAAATCCAGCGTACTATGCTTGAGCTTCTTAACCAGCTCGATGGTTTCG
ATGATCGGGGTGACGTCAAGGTCATCATGGCCACCAACAAGATTGAGACC
TTGGATCCTGCTTTGATTCGTCCGGGACGTATCGACCGAAAGATTCTCTT
CGAAAACCCAGACCAAAATACCAAGAAGAAGATCTTTACCCTGCACACTT
CCAAGATGTCGCTGGGAGACGATGTCGACCTGGACGAGTTCATCAACCAG
AAGGATGATCTCTCTGGTGCTGATATTCGTGCGATCTGTACTGAAGCCGG
TTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTGCAGATGGACGACTTCC
GCGCAGCAAGGGAGCGGATCATGAAGACGAAGCAGGATGGAGGCCCGGTG
GAGGGACTGTACTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MTS2KJC3_006788Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006788-T1KJC3_006788-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006788-T1.utr5p1KJC3_006788-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006788-T1.exon1KJC3_006788-T1.exon1Aspergillus niger KJC3exon
KJC3_006788-T1.exon2KJC3_006788-T1.exon2Aspergillus niger KJC3exon
KJC3_006788-T1.exon3KJC3_006788-T1.exon3Aspergillus niger KJC3exon
KJC3_006788-T1.exon4KJC3_006788-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006788-T1.cdsKJC3_006788-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006788-T1.utr3p1KJC3_006788-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S protease regulatory subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:448659..450515 +
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