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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:450790..454776+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006789-T1 ID=KJC3_006789-T1|Name=KJC3_006789-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3987bp|location=Sequence derived from alignment at ch5:450790..454776+ (Aspergillus niger KJC3)
CGAAGGACCAGCTGCCATAATGGACGGATTTGACGAGGAAGCATTCAAGA
AGTTTTTCCCGACTAGCTTTGGCAAGCAAGAGAAGAAAGCCGATGTGAGC
TCGCAGATTGATCGCACCAAGCGCGCAGAAGTCTCTGAGAACCCTGATGG
CGACGGCAAAAAAGCGGGTTCAATAGGAGAGACGACGACTGAGGCGATTC
CCGCGGCCGAGGAGGATAACCAGAAGAACGATTCAGAAAGCGATGATGGG
AGCGACGACTCTGATGACGACTCTGACGATGAGGATGAGTTCCCGGTCTC
TCACGAACTCACTCTCAAAACACACGACCGCGCAGTGACAACCTTGACCG
TGGATCCCGCAGGTTCGCGACTGATCACCGGCTCGACCGATTGTACTATA
AAGCTACATGACTTTGCGTCCATGACCCCGTCGACAATACGCGCATTCAA
ATCCGTCGATCCTTCTGCCAAAAAGCAGTCTGCTGCGCAGGAGGCGCATG
CCGTGCATTATGCAGCTTTCAATCCCTTGTCCCCCAGCTACGTCATGGTT
GTTTCGGCCACACCTCAGCCAAGGATTTTGAGTCGCGATGGTGATACGGT
TACCGAGTTTGTCAAGGGTGATATGTATTTGAGGGATCTTCACAACACCA
AAGGTCACATCTCTGAGGTAACTGGCGGCGTGTGGTGTCCAACCGACGAG
AACCTGTGTGCCACCGCAGGCACAGATAGTACTGTGCGCATCTGGGACGC
CAATATCGGTCGGTCACAGAAGGAGGTCATCGTGCATAAATCAAAGATGG
CGGGATCCGCTGGCCGGAGTAAAATGACCGCTGTTGCATGGGGTTCTCCC
AAGCAGGGTGGCCCTAATGTTCTCGTTGCTGCTGCGCTTGATGGCAGCTT
GCTGATGTGGAGCGGAAACGGGCCGTACACTCGGCCAAGCGCAGAGATTA
GAGATGCACATACTAAGGATACCTGGACGAGTGGAATCGACATTAGCTCC
GATGGGCGGCTTGTTATTACCAAGGGCGGAGATGACACTATCAAGCTGTG
GGATACCAGGAAGTTCAAGCAACCCATCACCACGGTCGCCCATCCTTCCA
GCACTCGGTACCCGTCGTCGAATATCATCTTCTCGCCTACATCGGCCAAT
GTTCTCACGGGCTCGGAGACTGGACACCTGCATATCTTGAATCCAGCTAC
GTTGAAACCGGAACTGGTTACGCCTGTTACGCCGGGATCGCCTCTTATTA
GCGTTTTGTGGCATGAGAAGATGAACCAGATTATTACCGGCTCGGCCAAC
GCCGAAACTCATGTTCTTTACAACCCTAATATGTCTACCAAGGGTGCCGC
ATTGATTATGTCCAAGGCCCCGAAGCGTCGACACATTGATGATGACCCGA
GCCTTACCATGGATCTCACCCAGGGGATTTCTGGCGATTCTGTGGTTGTC
GGATCCAACGGGGTGCCTCATTACAGTTCGTCCACCTGGTCCGCCCGGCA
CCCGACCATCGGACTCACGGCGTCAGGCCGCCCAAGAGATCCACGGAGAC
CTCATCTACCAGCACAAACACCTTTCGCGAAATCGCAGCCGGATGAGAAG
CATATCCGTGAGAACATTCCTCTTAGTTCCATGCGGGATGAAGATCCCCG
GGAAGCTCTGCTCAAGTATGCAGACAAGGCTGAGAAGGACCCGGTATTCA
CCAGGGCGTATAAGGAGACGCAGCCCACGCCAATCTACCGGGATATTAGT
GATGATGAGAACGAGCAGGGGCCGGATAAGAAGCGGGCAAAGCGATGAAG
TGTTGCGACCGATCGGAAATAATAGCGATCGTTTCCATTCGCTCTATGCC
ATGATTCAGGACATGTACACACTATACTTTTGGAGCAAGGGCGGCGTTGA
GCGTGATGAACTTTCGTGGCAGATCAAGTGTGTTAATAATCAGCCGCCCT
CTCAACGGGAGTTAAACAAACAACAGAGATACCCCTATGGCAGTAAATAC
TGTGAAACTCTAGTCATAGTCGTGCATAACGAGTAAGTGTACTCCGTAGG
TACTTGCGGCATGGGCTGCCTGCTCGATGACGTTGAAGGGGCTGGTGGGT
GGGCCAGGATGTGCAAGTCGCCCATTCTCCGGATCGGCCACTCGACGTTG
ATCTGGAGGAGGCGAGCAAGCCAATGATTCCACGACTGCGGCTGGCTCCT
CGATAATCTCCTGCAGCCTGTCCAGCTATGATTGCACAGCAAACCTCACG
CGATGCTGTGCTTTTACGTGGTATTTTCCACCCTCCCAACTTGAGCAGGC
TCGCACGTGCGAACTGGTCGTATCCAAGGATTTTAGGCCCGAGTTTAGGG
ACTGCGACTAGTTAGTTCCTCTCGCCGGTTCTCTCGGCATCTCTCTCTCT
CTCACTCACTCAGAGAATCCGCCCGTCCCTCCTCCCCCATCTTATTCTCT
ACATCCGTGCACTTTACCACTGTCGGACCTCGCTCACGGTTGACGGGCGT
CCATTCTCCATATTACTGCTTTGTGGTGCCTTTCGGAATCTCTTTCCATC
TGTTGGTGAACGAAGACTTCCGCGCTCGGATTTTATCACTTAGGGGATAC
AGAATGTCGTGGCTCACAGCAGCATGAACCCCTGCCCCCCAAGAAGCTGA
TGCCAATAACCTGAAGGAATATATGCTGTGACGATTACCGGAAGTCTCCT
CTTCGTTTCAGTCAGTCGGCTGCCATTTTCTTGCCGACTTGTCGACATCG
GAGGCTTTCCGCATCCTACGACCTTTATAGCGGCGGATCAGTCGGGACCT
CCTTTTCACTCCCGCGCTCGCCTTATAGTCAGGCCTACCTGCGCCCGGCA
TACCCTCGAGTCAACCTCCTATTGCGGATGGCTTACTTGCAAGAGGTGCC
CCTGGCAGCAGGCCTGCTCACCGCGCTCGCCTCCTCCGCTGTTCCTACGC
CGACACCCACGCCGTATCACTACTTCCCCTCCTCGTCCCAGCCTTCTCCG
ACGTTCACATCAAGTCCCGGGTCTGACAATGGCGATGGTGGAAGTGGTGG
AGGGATGCACGAATGGTCTTCCCTGATTGGCATCGTGACTGCGCTGGCAG
GCAATGTGTTGATCTCCTTGGCGCTCAACATCCAGCGGTATGCTCACATC
CGTATCGATAAGGAGTGGGAACAGGACAAGTTAAGACATGAGTTGGACTG
GAAACGTGCCAACCATGGACACGGCAGCTCCGGCGCATATGGATCTATCG
ATGACGACGAATTCGACGGAGACGCAAGCCGAGGAAGACATCGTGCGTCT
CGACCGGCTCGTTACCGAGATGAATCTCCTACTTCTGAACCCAATCATTA
TGAGGAACGCCGCGGCCATTCCGGACGAACCCGCCGTTACAGGGACGACG
AGACAGACTCACAGGATCATATGCAGGACTCCATGATATCCGACCGGACT
GCGCGGTCGGGGAGTGAGCGTTTGCGCCGCAAATCGTATCTTCGGTCGCC
GTACTGGTGGGTCGGAATCGTCCTCATGTCACTTGGCGAGGTCGGGAATT
TTATGGCCTATGGATTTGCTCCGGCATCTATCGTGTCACCGCTCGGCGTT
GTTGCCCTCATCTCGAACTGCGTTATCGCGCCATTTATGCTGAAGGAGAA
ATTTAGACAGCGTGACTTGTGGGGCGTTCTTATTGCAATCGCAGGAGCGG
TGGTGGTTGTCCTCAGCGCGAAGTCGTCAGAAGAGAAGATCGGCCCTCAT
GATATCTGGGAGATGATTACACGCTGGGAGTTCGAGCTGTACTTGGGCGT
TTCCGCTGTGCTTATTGTCGGGCTCATGTGGGCAAGCGGCAAGTACGGAT
CGCGATCGATCCTGATCGATGTCGGCTTGGTGGCGTTATTTGGTACGTAC
ACATTGTCCCTCTAGTTATATACCATCTATCCCTGCTGGTGGATCGTTGC
TTATCTCTTGACTAGGTGGATATACTGCTTTGTCGAC back to topCoding sequence (CDS) from alignment at ch5:450790..454776+ >KJC3_006789-T1 ID=KJC3_006789-T1|Name=KJC3_006789-T1|organism=Aspergillus niger KJC3|type=CDS|length=1779bp|location=Sequence derived from alignment at ch5:450790..454776+ (Aspergillus niger KJC3)
ATGGACGGATTTGACGAGGAAGCATTCAAGAAGTTTTTCCCGACTAGCTT
TGGCAAGCAAGAGAAGAAAGCCGATGTGAGCTCGCAGATTGATCGCACCA
AGCGCGCAGAAGTCTCTGAGAACCCTGATGGCGACGGCAAAAAAGCGGGT
TCAATAGGAGAGACGACGACTGAGGCGATTCCCGCGGCCGAGGAGGATAA
CCAGAAGAACGATTCAGAAAGCGATGATGGGAGCGACGACTCTGATGACG
ACTCTGACGATGAGGATGAGTTCCCGGTCTCTCACGAACTCACTCTCAAA
ACACACGACCGCGCAGTGACAACCTTGACCGTGGATCCCGCAGGTTCGCG
ACTGATCACCGGCTCGACCGATTGTACTATAAAGCTACATGACTTTGCGT
CCATGACCCCGTCGACAATACGCGCATTCAAATCCGTCGATCCTTCTGCC
AAAAAGCAGTCTGCTGCGCAGGAGGCGCATGCCGTGCATTATGCAGCTTT
CAATCCCTTGTCCCCCAGCTACGTCATGGTTGTTTCGGCCACACCTCAGC
CAAGGATTTTGAGTCGCGATGGTGATACGGTTACCGAGTTTGTCAAGGGT
GATATGTATTTGAGGGATCTTCACAACACCAAAGGTCACATCTCTGAGGT
AACTGGCGGCGTGTGGTGTCCAACCGACGAGAACCTGTGTGCCACCGCAG
GCACAGATAGTACTGTGCGCATCTGGGACGCCAATATCGGTCGGTCACAG
AAGGAGGTCATCGTGCATAAATCAAAGATGGCGGGATCCGCTGGCCGGAG
TAAAATGACCGCTGTTGCATGGGGTTCTCCCAAGCAGGGTGGCCCTAATG
TTCTCGTTGCTGCTGCGCTTGATGGCAGCTTGCTGATGTGGAGCGGAAAC
GGGCCGTACACTCGGCCAAGCGCAGAGATTAGAGATGCACATACTAAGGA
TACCTGGACGAGTGGAATCGACATTAGCTCCGATGGGCGGCTTGTTATTA
CCAAGGGCGGAGATGACACTATCAAGCTGTGGGATACCAGGAAGTTCAAG
CAACCCATCACCACGGTCGCCCATCCTTCCAGCACTCGGTACCCGTCGTC
GAATATCATCTTCTCGCCTACATCGGCCAATGTTCTCACGGGCTCGGAGA
CTGGACACCTGCATATCTTGAATCCAGCTACGTTGAAACCGGAACTGGTT
ACGCCTGTTACGCCGGGATCGCCTCTTATTAGCGTTTTGTGGCATGAGAA
GATGAACCAGATTATTACCGGCTCGGCCAACGCCGAAACTCATGTTCTTT
ACAACCCTAATATGTCTACCAAGGGTGCCGCATTGATTATGTCCAAGGCC
CCGAAGCGTCGACACATTGATGATGACCCGAGCCTTACCATGGATCTCAC
CCAGGGGATTTCTGGCGATTCTGTGGTTGTCGGATCCAACGGGGTGCCTC
ATTACAGTTCGTCCACCTGGTCCGCCCGGCACCCGACCATCGGACTCACG
GCGTCAGGCCGCCCAAGAGATCCACGGAGACCTCATCTACCAGCACAAAC
ACCTTTCGCGAAATCGCAGCCGGATGAGAAGCATATCCGTGAGAACATTC
CTCTTAGTTCCATGCGGGATGAAGATCCCCGGGAAGCTCTGCTCAAGTAT
GCAGACAAGGCTGAGAAGGACCCGGTATTCACCAGGGCGTATAAGGAGAC
GCAGCCCACGCCAATCTACCGGGATATTAGTGATGATGAGAACGAGCAGG
GGCCGGATAAGAAGCGGGCAAAGCGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006789-T1.utr5p1 | KJC3_006789-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006789-T1.utr3p1 | KJC3_006789-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:450790..454776 + |
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