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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:539090..540529+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006816-T1 ID=KJC3_006816-T1|Name=KJC3_006816-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1440bp|location=Sequence derived from alignment at ch5:539090..540529+ (Aspergillus niger KJC3)
ATGTCATTATGGGCTACCGTCGGAACATGCACGGCCACTAGAACTTTCCG
GCAAATACTCGCCCCCACTCACGTAAGGGCAGACTGGCGAACCTGTATGC
TGTATGGCGAACGACTTCTAGGACGCAAAACCAGTGCCACCGAAGATGCC
TAAGGAGGCAGAAATGAGGGACGAGTCCACCCAGGTAGGATGGACGACCG
ACTTGCGCCCCAAGGTGTCGACCACTACAGGCACAATAGTAATTCAAGCC
TTCGAGCCAGTTTATCTTAAGCCAGAAATGGGGAATAGTTTCTGGAAGTT
TGCCACCGCAGACGGCCAGACTATTGCAGAGTCGACGATCCAGTAAATGA
CCAAGTATTCAAGCCGGGACGCCAAACTACGCCTCGCAAAGCGCAGCTTC
GTTACTTTACTTACTCGTTTACCTGACATACAGACTCGCGCAGAAGGGTA
TTACCACTTGGTCGCCCGGATTAATTCCCTCGGTGACTAGATCACAATTA
TGTCATGCATCGCGTCAAGTCTAATATATGCTTATAATCTGTTACGGAGA
CTTAATGTCTATCGCAATACGCAATATCCCACTTCGAAACTATTTCGAAT
CATGCCTCGTAATATGGATACAGCAACCATGCGTTCTAAATGGTTCTCAC
AGGGTGAGATTGGCCCAAGATCAATCATAAAGCTCAACAATGACTGGGTC
GTCCAGCAGGCTATAAGTGAGCACACATTCCAGAAAGATCACGATGACCA
TCTCGCTAGGAGAGGTCCTTCCTGGACGGCAATTCGCCTCCTCGTCGAAG
ATAGGAGCGCGCGTACCAAGGCCTATATGCGCACTTACAAGCAACTTATG
CACGGTGACACGGAGGCCGAGCCAGCCAGGGTTCGAACCCGGCAGGCTAA
TTCTTCGTGGTGTCCTGTTGAGCTGAAGGCTTACCGATCACTTCCTAACA
AGCGACCTCTCATTGTACCGCGTCTTTTAGGAGAAAGGGTGACCAAGCAA
GATGCAAGCGGTTGGGTGCCAGACGGCTTCCTCATATATATTGTGTGGGA
AATAGTACCCGGGATTCAGCTCGGAGATCCTTGTGGTTCCAAGGTCTTTT
GGACACTGGAGCGAGCAGAGAGAGATCTCATCCGGGAGAAATTTAAGGAG
GGCTATATGAAGCTGTACGAATGGGGATTCGACCCTCGTCCTGGGTGCGG
CCAGAATCTCGTTTGGAACGCGAAAACGTCGACACTGTAAGCAGCTGGAG
GGCAACATGCGTCTACATGCTAACAGATATTACCTTAACGTATTATAGGT
ACTTCGTTGGGTGGTTTTTGGCATACGAGGACATTGAGAAGAAAGAGTGG
ACTCCCAGATTCTGGTATTTCTGGGACCTAGTCCGTGCTCCTGAGAAGCG
TCAACGTCATGAAAATCCGGATGATAGTTGGATGTGGTAA back to topCoding sequence (CDS) from alignment at ch5:539090..540529+ >KJC3_006816-T1 ID=KJC3_006816-T1|Name=KJC3_006816-T1|organism=Aspergillus niger KJC3|type=CDS|length=4488bp|location=Sequence derived from alignment at ch5:539090..540529+ (Aspergillus niger KJC3)
ATGTCATTATGGGCTACCGTCGGAACATGCACGGCCACTAGAACTTTCCG
GCAAATACTCGCCCCCACTCACGACGCAAAACCAGTGCCACCGAAGATGC
CTAAGGAGGCAGAAATGAGGGACGAGTCCACCCAGGTAGGATGGACGACC
GACTTGCGCCCCAAGGTGTCGACCACTACAGGCACAATAGTAATTCAAGC
CTTCGAGCCAGTTTATCTTAAGCCAGAAATGGGGAATAGTTTCTGGAAGT
TTGCCACCGCAGACGGCCAGACTATTGCAGAGTCGACGATCCAACTTAAT
GTCTATCGCAATACGCAATATCCCACTTCGAAACTATTTCGAATCATGCC
TCGTAATATGGATACAGCAACCATGCGTTCTAAATGGTTCTCACAGGGTG
AGATTGGCCCAAGATCAATCATAAAGCTCAACAATGACTGGGTCGTCCAG
CAGGCTATAAGTGAGCACACATTCCAGAAAGATCACGATGACCATCTCGC
TAGGAGAGGTCCTTCCTGGACGGCAATTCGCCTCCTCGTCGAAGATAGGA
GCGCGCGTACCAAGGCCTATATGCGCACTTACAAGCAACTTATGCACGGT
GACACGGAGGCCGAGCCAGCCAGGGTTCGAACCCGGCAGGCTAATTCTTC
GTGGTGTCCTGTTGAGCTGAAGGCTTACCGATCACTTCCTAACAAGCGAC
CTCTCATTGTACCGCGTCTTTTAGGAGAAAGGGTGACCAAGCAAGATGCA
AGCGGTTGGGTGCCAGACGGCTTCCTCATATATATTGTGTGGGAAATAGT
ACCCGGGATTCAGCTCGGAGATCCTTGTGGTTCCAAGGTCTTTTGGACAC
TGGAGCGAGCAGAGAGAGATCTCATCCGGGAGAAATTTAAGGAGGGCTAT
ATGAAGCTGTACGAATGGGGATTCGACCCTCGTCCTGGGTGCGGCCAGAA
TCTCGTTTGGAACGCGAAAACGTCGACACTGTACTTCGTTGGGTGGTTTT
TGGCATACGAGGACATTGAGAAGAAAGAGTGGACTCCCAGATTCTGGTAT
TTCTGGGACCTAGTCCGTGCTCCTGAGAAGCGTCAACGTCATGAAAATCC
GGATGATAGTTGGATGTGGTAAATGTCATTATGGGCTACCGTCGGAACAT
GCACGGCCACTAGAACTTTCCGGCAAATACTCGCCCCCACTCACGACGCA
AAACCAGTGCCACCGAAGATGCCTAAGGAGGCAGAAATGAGGGACGAGTC
CACCCAGGTAGGATGGACGACCGACTTGCGCCCCAAGGTGTCGACCACTA
CAGGCACAATAGTAATTCAAGCCTTCGAGCCAGTTTATCTTAAGCCAGAA
ATGGGGAATAGTTTCTGGAAGTTTGCCACCGCAGACGGCCAGACTATTGC
AGAGTCGACGATCCAACTTAATGTCTATCGCAATACGCAATATCCCACTT
CGAAACTATTTCGAATCATGCCTCGTAATATGGATACAGCAACCATGCGT
TCTAAATGGTTCTCACAGGGTGAGATTGGCCCAAGATCAATCATAAAGCT
CAACAATGACTGGGTCGTCCAGCAGGCTATAAGTGAGCACACATTCCAGA
AAGATCACGATGACCATCTCGCTAGGAGAGGTCCTTCCTGGACGGCAATT
CGCCTCCTCGTCGAAGATAGGAGCGCGCGTACCAAGGCCTATATGCGCAC
TTACAAGCAACTTATGCACGGTGACACGGAGGCCGAGCCAGCCAGGGTTC
GAACCCGGCAGGCTAATTCTTCGTGGTGTCCTGTTGAGCTGAAGGCTTAC
CGATCACTTCCTAACAAGCGACCTCTCATTGTACCGCGTCTTTTAGGAGA
AAGGGTGACCAAGCAAGATGCAAGCGGTTGGGTGCCAGACGGCTTCCTCA
TATATATTGTGTGGGAAATAGTACCCGGGATTCAGCTCGGAGATCCTTGT
GGTTCCAAGGTCTTTTGGACACTGGAGCGAGCAGAGAGAGATCTCATCCG
GGAGAAATTTAAGGAGGGCTATATGAAGCTGTACGAATGGGGATTCGACC
CTCGTCCTGGGTGCGGCCAGAATCTCGTTTGGAACGCGAAAACGTCGACA
CTGTACTTCGTTGGGTGGTTTTTGGCATACGAGGACATTGAGAAGAAAGA
GTGGACTCCCAGATTCTGGTATTTCTGGGACCTAGTCCGTGCTCCTGAGA
AGCGTCAACGTCATGAAAATCCGGATGATAGTTGGATGTGGTAAATGTCA
TTATGGGCTACCGTCGGAACATGCACGGCCACTAGAACTTTCCGGCAAAT
ACTCGCCCCCACTCACGACGCAAAACCAGTGCCACCGAAGATGCCTAAGG
AGGCAGAAATGAGGGACGAGTCCACCCAGGTAGGATGGACGACCGACTTG
CGCCCCAAGGTGTCGACCACTACAGGCACAATAGTAATTCAAGCCTTCGA
GCCAGTTTATCTTAAGCCAGAAATGGGGAATAGTTTCTGGAAGTTTGCCA
CCGCAGACGGCCAGACTATTGCAGAGTCGACGATCCAACTTAATGTCTAT
CGCAATACGCAATATCCCACTTCGAAACTATTTCGAATCATGCCTCGTAA
TATGGATACAGCAACCATGCGTTCTAAATGGTTCTCACAGGGTGAGATTG
GCCCAAGATCAATCATAAAGCTCAACAATGACTGGGTCGTCCAGCAGGCT
ATAAGTGAGCACACATTCCAGAAAGATCACGATGACCATCTCGCTAGGAG
AGGTCCTTCCTGGACGGCAATTCGCCTCCTCGTCGAAGATAGGAGCGCGC
GTACCAAGGCCTATATGCGCACTTACAAGCAACTTATGCACGGTGACACG
GAGGCCGAGCCAGCCAGGGTTCGAACCCGGCAGGCTAATTCTTCGTGGTG
TCCTGTTGAGCTGAAGGCTTACCGATCACTTCCTAACAAGCGACCTCTCA
TTGTACCGCGTCTTTTAGGAGAAAGGGTGACCAAGCAAGATGCAAGCGGT
TGGGTGCCAGACGGCTTCCTCATATATATTGTGTGGGAAATAGTACCCGG
GATTCAGCTCGGAGATCCTTGTGGTTCCAAGGTCTTTTGGACACTGGAGC
GAGCAGAGAGAGATCTCATCCGGGAGAAATTTAAGGAGGGCTATATGAAG
CTGTACGAATGGGGATTCGACCCTCGTCCTGGGTGCGGCCAGAATCTCGT
TTGGAACGCGAAAACGTCGACACTGTACTTCGTTGGGTGGTTTTTGGCAT
ACGAGGACATTGAGAAGAAAGAGTGGACTCCCAGATTCTGGTATTTCTGG
GACCTAGTCCGTGCTCCTGAGAAGCGTCAACGTCATGAAAATCCGGATGA
TAGTTGGATGTGGTAAATGTCATTATGGGCTACCGTCGGAACATGCACGG
CCACTAGAACTTTCCGGCAAATACTCGCCCCCACTCACGACGCAAAACCA
GTGCCACCGAAGATGCCTAAGGAGGCAGAAATGAGGGACGAGTCCACCCA
GGTAGGATGGACGACCGACTTGCGCCCCAAGGTGTCGACCACTACAGGCA
CAATAGTAATTCAAGCCTTCGAGCCAGTTTATCTTAAGCCAGAAATGGGG
AATAGTTTCTGGAAGTTTGCCACCGCAGACGGCCAGACTATTGCAGAGTC
GACGATCCAACTTAATGTCTATCGCAATACGCAATATCCCACTTCGAAAC
TATTTCGAATCATGCCTCGTAATATGGATACAGCAACCATGCGTTCTAAA
TGGTTCTCACAGGGTGAGATTGGCCCAAGATCAATCATAAAGCTCAACAA
TGACTGGGTCGTCCAGCAGGCTATAAGTGAGCACACATTCCAGAAAGATC
ACGATGACCATCTCGCTAGGAGAGGTCCTTCCTGGACGGCAATTCGCCTC
CTCGTCGAAGATAGGAGCGCGCGTACCAAGGCCTATATGCGCACTTACAA
GCAACTTATGCACGGTGACACGGAGGCCGAGCCAGCCAGGGTTCGAACCC
GGCAGGCTAATTCTTCGTGGTGTCCTGTTGAGCTGAAGGCTTACCGATCA
CTTCCTAACAAGCGACCTCTCATTGTACCGCGTCTTTTAGGAGAAAGGGT
GACCAAGCAAGATGCAAGCGGTTGGGTGCCAGACGGCTTCCTCATATATA
TTGTGTGGGAAATAGTACCCGGGATTCAGCTCGGAGATCCTTGTGGTTCC
AAGGTCTTTTGGACACTGGAGCGAGCAGAGAGAGATCTCATCCGGGAGAA
ATTTAAGGAGGGCTATATGAAGCTGTACGAATGGGGATTCGACCCTCGTC
CTGGGTGCGGCCAGAATCTCGTTTGGAACGCGAAAACGTCGACACTGTAC
TTCGTTGGGTGGTTTTTGGCATACGAGGACATTGAGAAGAAAGAGTGGAC
TCCCAGATTCTGGTATTTCTGGGACCTAGTCCGTGCTCCTGAGAAGCGTC
AACGTCATGAAAATCCGGATGATAGTTGGATGTGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:539090..540529 + |
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