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KJC3_006825-T2, KJC3_006825-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006825-T2
Unique NameKJC3_006825-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:564642..567214-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006825-T2 ID=KJC3_006825-T2|Name=KJC3_006825-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2573bp|location=Sequence derived from alignment at ch5:564642..567214- (Aspergillus niger KJC3)
GCGTACTGTGGATTTTATGCGAAATAAGGAAATCCAGGGCGGGAGAGGAG
AAGGTGGACGCTGACTGCACAATGGTCCGCGCGATGAGGCCAGGCGCATC
AATTTCCAGGAGATCATGAAAAAAGTTAATCAAAGTCATATGCATGAGCA
CATCATCCTTGTCGACCATATGGCAAGCAGCGAAATGGAGAAGGCCATTG
CTCTGGTATTTCCTCTCAACTTCTGGCACTTGTGGCTTCGAAATAATATC
CCAATGCAGTCGACCCGCCTTCACAAGCAGTCCCATCAACCGTCCCTGGG
CTACAGTCTTGTCGCGCTTGGACAGACTTCCGGATCCATTCTCCTTGAGA
CTGCAGAGGGAAAATAGCAGTCCATAAACATCCTTGTCCGTGAAAATTCG
TCTCCAAACGAGCCCTTGTCCACCGGTGGCCTCCTCTCCCTCATGCCCAC
TATTCTCGAGCGGACTGGCCGAGTCAACCTCCAACAGCTCCCAAATTGTG
TCAAATGCCGCCTGTGCTACCGCTGTGGAAGAGGTCGAAAGCCACAGCTC
CACCAGAGACGAGACCAATTCCGGATCGCCGGCAACGATGGCAGCATCAC
TAGCGACATGACCTGCTTTGCGCAGCAATGACAGAGCCAATAGGTTGATG
GGTTCCGATGGGGCCTTGAAACCGGCGATGAAATTGATCGGAGGATCGAC
GGAGTGAAGGTCAGCGAAGCTGAGATACGTAGTAGCCTTGACTCCAAGAG
CGGTAAGAGGAGTCGGGTCCTCCTGCAGGACGGGGAGAAGCTGCGATATC
TGGATCAAAAGGGTGGCGGGGACTCTGCGATCGACGTTCTCGGTAAGCTC
GAGCTTCAACTTGTCTAGGAGAGTCGTATCCAGAGGAGTGGAGGGCTCGC
GCTGCACCTGTTCCAGGTGCTGTCGGACCTCATCGTAAGTAGATGGGACG
GCCATGTTGATTCCAGACAGATCCACGATGATGCGATCCGTGGGGAAGCG
AGAGACGACGAAGGCAAGTCAGGAACGGCTTTCTTATCCTCGGCGGCGGG
GAAAGCTGGTTGCAAACGGGACAAACACCGATGACATCTCCGCCAGTCTC
CCCGACGATAAGTTCCAGACTATCACTGCTTCCTCCTATCATTTCACCTC
GGTATACCATCTCCTCCTTCAAGGACATATTGTTCATCATGTCTGATCAG
CCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCATATCCA
GCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCGCCATG
CCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAG
AACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTGAACGA
GGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAG
TCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAACCATCTACATGCATC
TGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACAAAGCTCCTGCCCTT
GACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGT
CCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCCG
TGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGGC
GGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATGC
GACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTAA
CGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGAG
ATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGA
CACACAAGGCACGGCCTCTCTCACAAAACAATCAGCCGGCAAAGAACCCA
GCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACGTAAGCAT
CCCTCCACCCCCATACCTAAAACCAAACGTCCATCACTAACCAAAACTAC
CCCACACAGTAATCGCCAGCCTCACCACCCGCCTCAACGCCATCAAGACC
CTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCATCTCCAC
CTCCGACCCAGAAACCCCCAACTCAACAACAACCCTCTCCCACCCCATCC
TCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGAT
GAACAAAGCGCCTTCACAGCCGAAGCCATCGCCCAGAGCAACGACGTCCA
CCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCG
AGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATG
TCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTT
TTCGACTGGGGATGGGGTGAGTCATGGATAGGAGTGAGGTATCTGGTGTG
AGATGGAGTTAATCAACATTAGTAGCTGATAGGAGTCTTAACGAACCATG
AATGCATGATCATACCCTGACTG
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Coding sequence (CDS) from alignment at ch5:564642..567214-

>KJC3_006825-T2 ID=KJC3_006825-T2|Name=KJC3_006825-T2|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch5:564642..567214- (Aspergillus niger KJC3)
TCAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCA
ACTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCA
GATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCAT
CCCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATC
TACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAAT
GCAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAACTGC
CCTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTA
GCAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCT
CACAAAACAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGC
TCTCCCCCGAGGAAGAAGAACGTAAGCATCCCTCCACCCCCATACCTAAA
ACCAAACGTCCATCACTAACCAAAACTACCCCACACAGTAATCGCCAGCC
TCACCACCCGCCTCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTC
ATCAAATCCTACGTCGCGAGCATCTCCACCTCCGACCCAGAAACCCCCAA
CTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCC
TCTCGCACCTCTCCCTTCTCACCCCTGAATGACATCTCCGCCAGTCTCCC
CGACGATAAGTTCCAGACTATCACTGCTTCCTCCTATCATTTCACCTCGG
TATACCATCTCCTCCTTCAAGGACATATTGTTCATCATGTCTGATCAGCC
GGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCATATCCAGC
TCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCGCCATGCC
GCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAA
CGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTGAACGAGG
GCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTC
AAGCAATTCAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTG
GTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCC
ATCGCCAGATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTC
CACCCATCCCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGT
GACAATCTACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCA
AGACAATGCAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGA
GAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGA
CACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGG
CCTCTCTCACAAAACAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCA
GAAGTGCTCTCCCCCGAGGAAGAAGAACGTAAGCATCCCTCCACCCCCAT
ACCTAAAACCAAACGTCCATCACTAACCAAAACTACCCCACACAGTAATC
GCCAGCCTCACCACCCGCCTCAACGCCATCAAGACCCTCGAATCCCGTAT
CTCCCTCATCAAATCCTACGTCGCGAGCATCTCCACCTCCGACCCAGAAA
CCCCCAACTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACATCAAC
GCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGAATGACATCTCCGCCA
GTCTCCCCGACGATAAGTTCCAGACTATCACTGCTTCCTCCTATCATTTC
ACCTCGGTATACCATCTCCTCCTTCAAGGACATATTGTTCATCATGTCTG
ATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCAT
ATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCG
CCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCC
AGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTG
AACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGA
GAGAGTCAAGCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006825KJC3_006825Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T2KJC3_006825-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T2.cdsKJC3_006825-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T2.utr3p1KJC3_006825-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T2.exon3KJC3_006825-T2.exon3Aspergillus niger KJC3exon
KJC3_006825-T2.exon2KJC3_006825-T2.exon2Aspergillus niger KJC3exon
KJC3_006825-T2.exon1KJC3_006825-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T2.utr5p2KJC3_006825-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006825-T2.utr5p1KJC3_006825-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0030137
DBxrefInterPro:IPR033859
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:564642..567214 -
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