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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:572733..574102+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006829-T1 ID=KJC3_006829-T1|Name=KJC3_006829-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1370bp|location=Sequence derived from alignment at ch5:572733..574102+ (Aspergillus niger KJC3)
CTTAAGAGTCGACGCCCCCTCACTGTCCCTTCCCCTCCATTGCCCCTTCT
CTTTTGAAGTCCCTTTACCACATAATATTGTCATAATGAGCGGCTTGCGA
ATTCTTGTCCCCGTGAAGCGGGTTATCGACTATGCGGTGAGTTTTGGTTT
TTGTCGCCTCGTGCTCCTCCTGCTCCGTTCTCGGTGAAGAGTCACATCTC
CGAGAGCAAAGTTGCCCGCACGCGCAGTTTGCAATTGTGCTCCGTCGGCA
CCAACACCTACATTCACCACACCATTATGATGTTATAGCGTACTATAGCA
ATATTGAGCATCACTGATAATGATAGGTCAAACCCCGCGTCAACAAGGCC
AACACCGGCGTCGAAACCGCCGGTGTCAAGCACTCCCTGAACCCGTTCGA
TGAACTCTCCGTCGAAGAAGCCATCCGCCTGCGCGAACGCGGCGCCAAGA
ACCAGAGCCCCATGAAGGTCGAAAACATCCTCGCCCTCTCCGCTGGCGGA
GCCAAGTGCGCCGATACCCTCCGCACCGCTATGGCCATGGGTGCCGACCG
CGCATTCCACGTCGACGTTGGCGAGAGCCCTGATGGAGGTCCCGAGCCCC
TGACGATCGCCAAGATGCTGCAGGGTGTGGTCAAGTCTGAGAACATTAAC
CTGGTGCTGCTGGGTAAGCAGGCGATTGATGGCGACCAGGGCCAGACCGG
TCAGATGCTGGCAGGTCTGTTGGGATGGCCGCAGGCGACGCAGGCGAGCA
AGGTCGATATCAAGGATGCGGATGGTACGGTGGAGGTGACGCATGAGGTG
GATGGTGGTGTTGAGACGCTGCGGGCTAAGTTGCCTATGGTCATTACTAC
GGATTTGCGGTTGAATGAGCCCCGCTATGCTACGCTGCCGAACATCATGA
AGGCTAAGAAGAAGCCTTTGGAGAAGAAGACGTTGGCGGATTTCGGTGTT
GAGGATAAGAAGCGCTTGAAGACTCTGAAGGTTACTGGTAAGTTCACTTC
CCTGCGTTGCACCCCCTCGGTGTTGTTTACAGACTAACCTGTTCCAGAAC
CCCCCGCTCGCCAGGGCGGTGGCAAGGTCGAGGATGTCGACGGCTTGATC
GGCAAGCTGAAGGAGCTGGGTGCCCTGTAAATGTGGAGTAGGGCAGATGA
TTCGATACAATAGGTATACCTTTGTGTGTATGTTTACGACTAGACTCGCG
TCCAGTGTCAGCTGAACCGGCTGGACCTTATTTCTCTCAATTTATCTATC
TCCCGCGGACCACCGACATGTTGTCTGGCTCCTATGTATTTGCTTATGCT
TAACTCTATCTGTGGCTGGCTATACCTGCTGCAGTGGGTCGACCGCACGA
ATCACTCATCGGGACAGGAG back to topCoding sequence (CDS) from alignment at ch5:572733..574102+ >KJC3_006829-T1 ID=KJC3_006829-T1|Name=KJC3_006829-T1|organism=Aspergillus niger KJC3|type=CDS|length=2385bp|location=Sequence derived from alignment at ch5:572733..574102+ (Aspergillus niger KJC3)
ATGAGCGGCTTGCGAATTCTTGTCCCCGTGAAGCGGGTTATCGACTATGC
GGTCAAACCCCGCGTCAACAAGGCCAACACCGGCGTCGAAACCGCCGGTG
TCAAGCACTCCCTGAACCCGTTCGATGAACTCTCCGTCGAAGAAGCCATC
CGCCTGCGCGAACGCGGCGCCAAGAACCAGAGCCCCATGAAGGTCGAAAA
CATCCTCGCCCTCTCCGCTGGCGGAGCCAAGTGCGCCGATACCCTCCGCA
CCGCTATGGCCATGGGTGCCGACCGCGCATTCCACGTCGACGTTGGCGAG
AGCCCTGATGGAGGTCCCGAGCCCCTGACGATCGCCAAGATGCTGCAGGG
TGTGGTCAAGTCTGAGAACATTAACCTGGTGCTGCTGGGTAAGCAGGCGA
TTGATGGCGACCAGGGCCAGACCGGTCAGATGCTGGCAGGTCTGTTGGGA
TGGCCGCAGGCGACGCAGGCGAGCAAGGTCGATATCAAGGATGCGGATGG
TACGGTGGAGGTGACGCATGAGGTGGATGGTGGTGTTGAGACGCTGCGGG
CTAAGTTGCCTATGGTCATTACTACGGATTTGCGGTTGAATGAGCCCCGC
TATGCTACGCTGCCGAACATCATGAAGGCTAAGAAGAAGCCTTTGGAGAA
GAAGACGTTGGCGGATTTCGGTGTTGAGGATAAGAAGCGCTTGAAGACTC
TGAAGGTTACTGAACCCCCCGCTCGCCAGGGCGGTGGCAAGGTCGAGGAT
GTCGACGGCTTGATCGGCAAGCTGAAGGAGCTGGGTGCCCTGTAAATGAG
CGGCTTGCGAATTCTTGTCCCCGTGAAGCGGGTTATCGACTATGCGGTCA
AACCCCGCGTCAACAAGGCCAACACCGGCGTCGAAACCGCCGGTGTCAAG
CACTCCCTGAACCCGTTCGATGAACTCTCCGTCGAAGAAGCCATCCGCCT
GCGCGAACGCGGCGCCAAGAACCAGAGCCCCATGAAGGTCGAAAACATCC
TCGCCCTCTCCGCTGGCGGAGCCAAGTGCGCCGATACCCTCCGCACCGCT
ATGGCCATGGGTGCCGACCGCGCATTCCACGTCGACGTTGGCGAGAGCCC
TGATGGAGGTCCCGAGCCCCTGACGATCGCCAAGATGCTGCAGGGTGTGG
TCAAGTCTGAGAACATTAACCTGGTGCTGCTGGGTAAGCAGGCGATTGAT
GGCGACCAGGGCCAGACCGGTCAGATGCTGGCAGGTCTGTTGGGATGGCC
GCAGGCGACGCAGGCGAGCAAGGTCGATATCAAGGATGCGGATGGTACGG
TGGAGGTGACGCATGAGGTGGATGGTGGTGTTGAGACGCTGCGGGCTAAG
TTGCCTATGGTCATTACTACGGATTTGCGGTTGAATGAGCCCCGCTATGC
TACGCTGCCGAACATCATGAAGGCTAAGAAGAAGCCTTTGGAGAAGAAGA
CGTTGGCGGATTTCGGTGTTGAGGATAAGAAGCGCTTGAAGACTCTGAAG
GTTACTGAACCCCCCGCTCGCCAGGGCGGTGGCAAGGTCGAGGATGTCGA
CGGCTTGATCGGCAAGCTGAAGGAGCTGGGTGCCCTGTAAATGAGCGGCT
TGCGAATTCTTGTCCCCGTGAAGCGGGTTATCGACTATGCGGTCAAACCC
CGCGTCAACAAGGCCAACACCGGCGTCGAAACCGCCGGTGTCAAGCACTC
CCTGAACCCGTTCGATGAACTCTCCGTCGAAGAAGCCATCCGCCTGCGCG
AACGCGGCGCCAAGAACCAGAGCCCCATGAAGGTCGAAAACATCCTCGCC
CTCTCCGCTGGCGGAGCCAAGTGCGCCGATACCCTCCGCACCGCTATGGC
CATGGGTGCCGACCGCGCATTCCACGTCGACGTTGGCGAGAGCCCTGATG
GAGGTCCCGAGCCCCTGACGATCGCCAAGATGCTGCAGGGTGTGGTCAAG
TCTGAGAACATTAACCTGGTGCTGCTGGGTAAGCAGGCGATTGATGGCGA
CCAGGGCCAGACCGGTCAGATGCTGGCAGGTCTGTTGGGATGGCCGCAGG
CGACGCAGGCGAGCAAGGTCGATATCAAGGATGCGGATGGTACGGTGGAG
GTGACGCATGAGGTGGATGGTGGTGTTGAGACGCTGCGGGCTAAGTTGCC
TATGGTCATTACTACGGATTTGCGGTTGAATGAGCCCCGCTATGCTACGC
TGCCGAACATCATGAAGGCTAAGAAGAAGCCTTTGGAGAAGAAGACGTTG
GCGGATTTCGGTGTTGAGGATAAGAAGCGCTTGAAGACTCTGAAGGTTAC
TGAACCCCCCGCTCGCCAGGGCGGTGGCAAGGTCGAGGATGTCGACGGCT
TGATCGGCAAGCTGAAGGAGCTGGGTGCCCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009055 | electron transfer activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006829-T1.utr5p1 | KJC3_006829-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006829-T1.utr3p1 | KJC3_006829-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263WWI |
| DBxref | InterPro:IPR033948 |
| DBxref | InterPro:IPR012255 |
| DBxref | InterPro:IPR014729 |
| DBxref | InterPro:IPR014730 |
| DBxref | PFAM:PF01012 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:572733..574102 + |
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