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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:608156..611096+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006842-T1 ID=KJC3_006842-T1|Name=KJC3_006842-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2941bp|location=Sequence derived from alignment at ch5:608156..611096+ (Aspergillus niger KJC3)
GCACAGCGTTCCACGTCAATCCTCTGGCCCCCCAATGGTCTTGCTGGTGC
CATGCGTGTCTCGTCCAGTCCCATAATTTGATTGCTGGTGAATCGCCGGA
TACCTTGTCCCCTGCAGACGCGATGCTGGGGTGGATCACTGGGCAGGAAG
ACCAGGTCGCAGGTGCGTGTATTTCCCTCTGTACTTTCTGCTGGTCGCTA
CGAGTAGTATGGCTTGCTGCCCGCCCTACTGCTGCTGCTGCTGCGTGCGC
GCGCCCTTCCCTCCACCTCCCTCCAGATACGGCCCAATAATGGCCTTCCA
ATTTTTCTGGCCTTGTTTCCCACCCGCGCTCATCGCGCGCTGACTTGTTT
TTCTAACTCGTTTATCCCCATAGACAACTCAAGGGCTGGAGAGCCACCCG
AGACGCCCGCTCCCGTGTTTGCGATCCGCGCTTTCAAGAGCGCCTTGTTT
GGTACCCCAGGCGCCGATGACGACGAGTCCACCCACCGTACTACTACTGC
TACTACTGCTGTGAAGACGAAGAATCCCTCGACCAATCAGCTCCTGAATG
ATCACATCACGTTGAAACCATCCAGTGGAAACACAGGGGATGCTTTCAAG
GCTTCCAAAGCCGACTTGGATCTGGCAATGAACGCGATGGCATCGCCTAC
AAAAAGTATCCTCGTAACACCCGGAACCGCATCCAACCGTCGCAAAACCG
TGTCGTTCGGCGACGGTGTCGTCGATAACGAGCGCAAGCGGGAAGACCCG
TTCACGAAACCTAACAAAACCCCCACCTCCTCTTCCAACAACTTCTCCAG
CCAGTGGTCGGCCACCTCGTCGGACGGAAAGTTCAAACCTCGCAGTAAAC
TGACGCAAGCCTTGATGGATTCGCGAGAGAAGTCCAAGGGCACGGGGCTC
TTTTCGTCACAGGACCTCGAGCCCAACCCCTCATCGGAGGGGTCCAGACC
ATCGCCAACGGAAGATGACAACGACGATACCATCAACTTGGATGAGCCAC
GGTCGCAGTCGGGGAAATACTGGAAAGCCGAATTTGATAATTACCGGACA
AAAACCACGTGGGAAATCAAGAAGCTCATCCAGTACCGCTCGGCCGCGAA
AACATACGCCAAGAAGAAGGATGAAGAAGCGTCGCGACTCGCCGATAAGT
TGAGGGAGGAGGAGATCAAGGTGTCTGAGATGGAGCGCCATGTTACCCAT
CTAGCATCGACCATGGTTGGGGAAAGCGCTAATGCCGATAAAGAGAAATT
GGTGCAGGACCTCACCAAGCAGACCGCGTTGGCTCTGCAGTACAAACACC
GGGTCAACTCACTACGCAAACTGCTGGAACGACACGGCGTCGTGGGGAAT
GAAGTCGACGATATCGCTGAGCAATCTGAATCCGAAAGTTCTTCAGAGAA
GACTACAGAAGAGCTCCGCAAAACCCAGCAGGCTCTGGACGAAGCGAAAG
CCAAGATCGACGATATGAAGCTTCAGCAGTCCGACTTCACCAAACTGCAA
GATCTCGCGCGCAGCTCTGAACAGAAAGCCTGCGAGTTGCAGAAGGAGAA
CGCGTCTCTCAAGCAGACCCTAGCCCGTGTGAAGCAGGAGATGAGCAAAT
ACGAAGGACGCCGCAAAGAGAAGGAAGCCAAACTGAAGCAGCGCGAGGCT
AAACTGGAAACGCGCATCCAAGAGTACCGCGAACGGTTGAAGAACGCCTC
TCAGCAGCATCGCGATCACGAGGAGAGTTTAAAAGAATCCTTCAATGAGG
AACGCCACCGCATGCAGGAGCAGATCGACCAACTCAAGATCAAGCTTACC
GCGATAGAGAGCCTCCCACACACCCAGGTTCGCGCGCGCCATAGCGAGAG
CCCTCGCAAGAACTACACCGGTGTGCATGTCTTCGATTTCGGGCAGAACA
GTCCCCAGAAAGACCCCGAAGACGACAACACCGCGGACATCGACGAGCCA
CCAAGTCCCAGCCCGCGTGCAAAAGAACGCCGCTCCTACCCATCCCGATA
CACCACCACCGCCGGCGACCTCGACCTCAAACGAGCCATGAAAGCCATGG
GCATCACCGACGAAGACCAGCTCGCCTACCTCGGCGAATCCCTCAAACCT
CCCAAATCCCGCTACCAAAACGAGAACCACGATGACGAAGAACCAGCCAC
CATCCCGCCCTCCTCCCCACCCGACTACCCCCATCACCATCACCACCCTC
CACCCTCCACCCGCCCGCGCCCCAAACAGAAATCCAACAACACAAACACC
TACCGCAGTCTCTACGCCCCAACCAACACAACCATGACCTCCCTCGCCCA
CCACCTCGCCAACAACCTCGACGACAGCCACCACGGCCGTCTGCGCGCGC
GCCGCTCTCCCTCCAAATATAGCCTGGACGCAGTCACGGCCCTCCCGGAC
TCACACGTCCTCGACCGCGCCAAGCGCCGTCAAAGCCTCGCGGCCGTCGT
GCCCCGGGATTCCATCCCTATGGACCGCAAACTGCAGGCCCAAGCACGTC
TCAAGCAACGAAAAGAGGAAACCCGAAAGGGGAAAGAGAATATGCGCACC
TATACGAACCAACCATTATCGGTTCTTGAACCTATTTCTTAATGTTTCTC
TTTCTTTATCTTCTTGTCTCCTATATGTCAGATGGGAACGGTACGGAGTG
AAATGGACGGATGGTGGATGGATGGATGAAACTCCCTCTCTAGTCACGGT
TTGCTTTGATACTTCAACCACCTTTCCCCTTTGTGTTGTGATCATGGAAA
TACCTCTCCTTGTTGTCTGATCTGATCTGATCTGATCTGTCTTTTGTTGT
TGGTGGTCTGGTGATATGGTCTGGTCTGCTTTGCTCTGATCCGGGTGTTC
CTTTTCCTCTGTTGATGTTGATGTCACTGTCACTCACTCACTACTTAGCT
CTAGTCCGTTGATCGTACGTAATTTTTAGTTCTTATTTCCC back to topCoding sequence (CDS) from alignment at ch5:608156..611096+ >KJC3_006842-T1 ID=KJC3_006842-T1|Name=KJC3_006842-T1|organism=Aspergillus niger KJC3|type=CDS|length=4518bp|location=Sequence derived from alignment at ch5:608156..611096+ (Aspergillus niger KJC3)
ATGCTGGGGTGGATCACTGGGCAGGAAGACCAGGTCGCAGACAACTCAAG
GGCTGGAGAGCCACCCGAGACGCCCGCTCCCGTGTTTGCGATCCGCGCTT
TCAAGAGCGCCTTGTTTGGTACCCCAGGCGCCGATGACGACGAGTCCACC
CACCGTACTACTACTGCTACTACTGCTGTGAAGACGAAGAATCCCTCGAC
CAATCAGCTCCTGAATGATCACATCACGTTGAAACCATCCAGTGGAAACA
CAGGGGATGCTTTCAAGGCTTCCAAAGCCGACTTGGATCTGGCAATGAAC
GCGATGGCATCGCCTACAAAAAGTATCCTCGTAACACCCGGAACCGCATC
CAACCGTCGCAAAACCGTGTCGTTCGGCGACGGTGTCGTCGATAACGAGC
GCAAGCGGGAAGACCCGTTCACGAAACCTAACAAAACCCCCACCTCCTCT
TCCAACAACTTCTCCAGCCAGTGGTCGGCCACCTCGTCGGACGGAAAGTT
CAAACCTCGCAGTAAACTGACGCAAGCCTTGATGGATTCGCGAGAGAAGT
CCAAGGGCACGGGGCTCTTTTCGTCACAGGACCTCGAGCCCAACCCCTCA
TCGGAGGGGTCCAGACCATCGCCAACGGAAGATGACAACGACGATACCAT
CAACTTGGATGAGCCACGGTCGCAGTCGGGGAAATACTGGAAAGCCGAAT
TTGATAATTACCGGACAAAAACCACGTGGGAAATCAAGAAGCTCATCCAG
TACCGCTCGGCCGCGAAAACATACGCCAAGAAGAAGGATGAAGAAGCGTC
GCGACTCGCCGATAAGTTGAGGGAGGAGGAGATCAAGGTGTCTGAGATGG
AGCGCCATGTTACCCATCTAGCATCGACCATGGTTGGGGAAAGCGCTAAT
GCCGATAAAGAGAAATTGGTGCAGGACCTCACCAAGCAGACCGCGTTGGC
TCTGCAGTACAAACACCGGGTCAACTCACTACGCAAACTGCTGGAACGAC
ACGGCGTCGTGGGGAATGAAGTCGACGATATCGCTGAGCAATCTGAATCC
GAAAGTTCTTCAGAGAAGACTACAGAAGAGCTCCGCAAAACCCAGCAGGC
TCTGGACGAAGCGAAAGCCAAGATCGACGATATGAAGCTTCAGCAGTCCG
ACTTCACCAAACTGCAAGATCTCGCGCGCAGCTCTGAACAGAAAGCCTGC
GAGTTGCAGAAGGAGAACGCGTCTCTCAAGCAGACCCTAGCCCGTGTGAA
GCAGGAGATGAGCAAATACGAAGGACGCCGCAAAGAGAAGGAAGCCAAAC
TGAAGCAGCGCGAGGCTAAACTGGAAACGCGCATCCAAGAGTACCGCGAA
CGGTTGAAGAACGCCTCTCAGCAGCATCGCGATCACGAGGAGAGTTTAAA
AGAATCCTTCAATGAGGAACGCCACCGCATGCAGGAGCAGATCGACCAAC
TCAAGATCAAGCTTACCGCGATAGAGAGCCTCCCACACACCCAGGTTCGC
GCGCGCCATAGCGAGAGCCCTCGCAAGAACTACACCGGTGTGCATGTCTT
CGATTTCGGGCAGAACAGTCCCCAGAAAGACCCCGAAGACGACAACACCG
CGGACATCGACGAGCCACCAAGTCCCAGCCCGCGTGCAAAAGAACGCCGC
TCCTACCCATCCCGATACACCACCACCGCCGGCGACCTCGACCTCAAACG
AGCCATGAAAGCCATGGGCATCACCGACGAAGACCAGCTCGCCTACCTCG
GCGAATCCCTCAAACCTCCCAAATCCCGCTACCAAAACGAGAACCACGAT
GACGAAGAACCAGCCACCATCCCGCCCTCCTCCCCACCCGACTACCCCCA
TCACCATCACCACCCTCCACCCTCCACCCGCCCGCGCCCCAAACAGAAAT
CCAACAACACAAACACCTACCGCAGTCTCTACGCCCCAACCAACACAACC
ATGACCTCCCTCGCCCACCACCTCGCCAACAACCTCGACGACAGCCACCA
CGGCCGTCTGCGCGCGCGCCGCTCTCCCTCCAAATATAGCCTGGACGCAG
TCACGGCCCTCCCGGACTCACACGTCCTCGACCGCGCCAAGCGCCGTCAA
AGCCTCGCGGCCGTCGTGCCCCGGGATTCCATCCCTATGGACCGCAAACT
GCAGGCCCAAGCACGTCTCAAGCAACGAAAAGAGGAAACCCGAAAGGGGA
AAGAGAATATGCGCACCTATACGAACCAACCATTATCGGTTCTTGAACCT
ATTTCTTAAATGCTGGGGTGGATCACTGGGCAGGAAGACCAGGTCGCAGA
CAACTCAAGGGCTGGAGAGCCACCCGAGACGCCCGCTCCCGTGTTTGCGA
TCCGCGCTTTCAAGAGCGCCTTGTTTGGTACCCCAGGCGCCGATGACGAC
GAGTCCACCCACCGTACTACTACTGCTACTACTGCTGTGAAGACGAAGAA
TCCCTCGACCAATCAGCTCCTGAATGATCACATCACGTTGAAACCATCCA
GTGGAAACACAGGGGATGCTTTCAAGGCTTCCAAAGCCGACTTGGATCTG
GCAATGAACGCGATGGCATCGCCTACAAAAAGTATCCTCGTAACACCCGG
AACCGCATCCAACCGTCGCAAAACCGTGTCGTTCGGCGACGGTGTCGTCG
ATAACGAGCGCAAGCGGGAAGACCCGTTCACGAAACCTAACAAAACCCCC
ACCTCCTCTTCCAACAACTTCTCCAGCCAGTGGTCGGCCACCTCGTCGGA
CGGAAAGTTCAAACCTCGCAGTAAACTGACGCAAGCCTTGATGGATTCGC
GAGAGAAGTCCAAGGGCACGGGGCTCTTTTCGTCACAGGACCTCGAGCCC
AACCCCTCATCGGAGGGGTCCAGACCATCGCCAACGGAAGATGACAACGA
CGATACCATCAACTTGGATGAGCCACGGTCGCAGTCGGGGAAATACTGGA
AAGCCGAATTTGATAATTACCGGACAAAAACCACGTGGGAAATCAAGAAG
CTCATCCAGTACCGCTCGGCCGCGAAAACATACGCCAAGAAGAAGGATGA
AGAAGCGTCGCGACTCGCCGATAAGTTGAGGGAGGAGGAGATCAAGGTGT
CTGAGATGGAGCGCCATGTTACCCATCTAGCATCGACCATGGTTGGGGAA
AGCGCTAATGCCGATAAAGAGAAATTGGTGCAGGACCTCACCAAGCAGAC
CGCGTTGGCTCTGCAGTACAAACACCGGGTCAACTCACTACGCAAACTGC
TGGAACGACACGGCGTCGTGGGGAATGAAGTCGACGATATCGCTGAGCAA
TCTGAATCCGAAAGTTCTTCAGAGAAGACTACAGAAGAGCTCCGCAAAAC
CCAGCAGGCTCTGGACGAAGCGAAAGCCAAGATCGACGATATGAAGCTTC
AGCAGTCCGACTTCACCAAACTGCAAGATCTCGCGCGCAGCTCTGAACAG
AAAGCCTGCGAGTTGCAGAAGGAGAACGCGTCTCTCAAGCAGACCCTAGC
CCGTGTGAAGCAGGAGATGAGCAAATACGAAGGACGCCGCAAAGAGAAGG
AAGCCAAACTGAAGCAGCGCGAGGCTAAACTGGAAACGCGCATCCAAGAG
TACCGCGAACGGTTGAAGAACGCCTCTCAGCAGCATCGCGATCACGAGGA
GAGTTTAAAAGAATCCTTCAATGAGGAACGCCACCGCATGCAGGAGCAGA
TCGACCAACTCAAGATCAAGCTTACCGCGATAGAGAGCCTCCCACACACC
CAGGTTCGCGCGCGCCATAGCGAGAGCCCTCGCAAGAACTACACCGGTGT
GCATGTCTTCGATTTCGGGCAGAACAGTCCCCAGAAAGACCCCGAAGACG
ACAACACCGCGGACATCGACGAGCCACCAAGTCCCAGCCCGCGTGCAAAA
GAACGCCGCTCCTACCCATCCCGATACACCACCACCGCCGGCGACCTCGA
CCTCAAACGAGCCATGAAAGCCATGGGCATCACCGACGAAGACCAGCTCG
CCTACCTCGGCGAATCCCTCAAACCTCCCAAATCCCGCTACCAAAACGAG
AACCACGATGACGAAGAACCAGCCACCATCCCGCCCTCCTCCCCACCCGA
CTACCCCCATCACCATCACCACCCTCCACCCTCCACCCGCCCGCGCCCCA
AACAGAAATCCAACAACACAAACACCTACCGCAGTCTCTACGCCCCAACC
AACACAACCATGACCTCCCTCGCCCACCACCTCGCCAACAACCTCGACGA
CAGCCACCACGGCCGTCTGCGCGCGCGCCGCTCTCCCTCCAAATATAGCC
TGGACGCAGTCACGGCCCTCCCGGACTCACACGTCCTCGACCGCGCCAAG
CGCCGTCAAAGCCTCGCGGCCGTCGTGCCCCGGGATTCCATCCCTATGGA
CCGCAAACTGCAGGCCCAAGCACGTCTCAAGCAACGAAAAGAGGAAACCC
GAAAGGGGAAAGAGAATATGCGCACCTATACGAACCAACCATTATCGGTT
CTTGAACCTATTTCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006842-T1.utr5p1 | KJC3_006842-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006842-T1.utr3p1 | KJC3_006842-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021589 |
| DBxref | PFAM:PF11500 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:608156..611096 + |
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