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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:666421..668300+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006861-T1 ID=KJC3_006861-T1|Name=KJC3_006861-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1880bp|location=Sequence derived from alignment at ch5:666421..668300+ (Aspergillus niger KJC3)
CAATCGCACTTTATTCCCTGAGGGTCTGTCGCTTCTTCGAGGTTATCTAG
GGAGGGATCATGTTCGGACGAATTGGGGGTAACACCCTGCGATGTGCTGC
ACGCAGACCAGCTGCCCGAAGAGTCCTACTATACGAGCGCAAATTCTCGG
CCAACACCTGCCATGCCAGTTCCAGCTCGCCTGCGACCTCAGCTGTGTCG
CCGTTAGGGAGCATCACGACCGAGTTGGATCGCATTTCGCCGTGCTTCGA
GGTGCCGGCGTCGCGGATTACAATCTTGGACTCCCCGGCTAGCTTCTACA
ACACGCTCAAGGTACGGGGATATCTCGGACTTTAACCGTCGTGGATTGCG
GCTAATTCGAGCATGTGCCATTCTACAGGACAAAATCAAGAAGGCTCGCA
AACGTATCTACCTCTCAACGTTGTACATCGGCAAGACGGAGCATGACCTG
ATCGAGACGTTGGACCAAGCTCTCGCGGCCAACCCCGAGCTCAAGGTCTC
CATCCTCACGGACGCTCTACGAGGAACGCGCGAAACGCCCAACCCTTCAT
GTGCGTCGCTATTGGCTTCTCTGGTTGAGAAATACGGTGCGGATAGAGTG
GAAATCCGCATGTTCCACACCCCGAATTTGACTGGGTTGAAGAAGAAATG
GGTGCCTCGTCGGATCAACGAGGGCTGGGGTCTCCAGCACATGAAGCTAT
ACGGCTTTGACGAGGAAATCATTCTGTCAGGGTATGTACGATGCTCCAGC
GATACTACATGGACGCTAACAGAACCCCAGAGCAAATCTCTCCAGCGACT
ACTTCACGAACCGCCTGGACCGATACCACGTCTTCCACTCCAAGGAGCTG
ACCGACTACTACGCCGGCATCCACAATGCAGTATGCAGTCTCAGCTTCCA
AGTCCTCCCCGACTCTCAAAACGCCGCAGGCTACCTCCTCAACTGGCCCG
CATCTAACGGTGCGCCTTCACCTCTCGACGACCCGGAGGACTTCATCACC
TATTCATCCACCGTCCTGAGCCCTCTCATCCAGCCCTCACTGAAGCAATC
CACTCTGTCCCCCAAATCCCCCGACCAAACCTACATCTACCCCGTCGCTC
AATTTACCTCCCTCTTCAAATCCAACGACACCTCGACCGAATTCCCCGCC
GTCACCACCATCCTCCGTCTCTTGTCCACCTCGCCCGCCTTCTCCGGCGC
CCGCTGGCTCTTCACAGCCGGCTACTTCAACATCCACCCTGTCCTCTCCT
CTCTCCTTATCGCCAGCACCTCCACCTCCCACACCGACTCCACCACCCGA
GGCACCGTCCTAACCGCCTCCCCCTGGGCCAACGGCTTCTACGGCTCCCC
CGGTATCTCTGGCATGCTGCCGGCAGCATACACGCACCTGTCCGCGCGGT
TTCTTGATCGCGTCGCCGACGCCCAGCGCACCAACTCCATCCAGCTGAAA
GAATGGCGCCGCGGCACTGTCGGCGAGCCCGGTGGCTGGACTTACCATGC
TAAGGGCCTCTGGATTACCCTCCCCAAGGAGGAACATCCCAGTCTGACCT
TCGTGGGTAGCAGTAACTACACGAAGCGCAGCTATAGTCTGGATCTGGAG
GTGGGAGCGCTCGTTGTCACGGGCGATGCAGAGCTGAAGCGTCAGTTGGG
CGCCGAGACGGAGCGGCTGCAGGAGGATGCGAAGGCCATTTCACGAGAGG
ATTTGAGGAGGACGGAGAGGAGGGTTAGTTGGAGGGTAAGGTTGGCGATG
TGGATTGTTGAGAAGGTGGGAGGGGCGTTATAGTATAGGTACCTATATGG
GTTATGTGTGATGCGATGTATTTGATAGATAGATAGTATACCCCGTGTAT
TATATCGAATGTACAGTATGGGATAGAGTC back to topCoding sequence (CDS) from alignment at ch5:666421..668300+ >KJC3_006861-T1 ID=KJC3_006861-T1|Name=KJC3_006861-T1|organism=Aspergillus niger KJC3|type=CDS|length=4824bp|location=Sequence derived from alignment at ch5:666421..668300+ (Aspergillus niger KJC3)
ATGTTCGGACGAATTGGGGGTAACACCCTGCGATGTGCTGCACGCAGACC
AGCTGCCCGAAGAGTCCTACTATACGAGCGCAAATTCTCGGCCAACACCT
GCCATGCCAGTTCCAGCTCGCCTGCGACCTCAGCTGTGTCGCCGTTAGGG
AGCATCACGACCGAGTTGGATCGCATTTCGCCGTGCTTCGAGGTGCCGGC
GTCGCGGATTACAATCTTGGACTCCCCGGCTAGCTTCTACAACACGCTCA
AGGACAAAATCAAGAAGGCTCGCAAACGTATCTACCTCTCAACGTTGTAC
ATCGGCAAGACGGAGCATGACCTGATCGAGACGTTGGACCAAGCTCTCGC
GGCCAACCCCGAGCTCAAGGTCTCCATCCTCACGGACGCTCTACGAGGAA
CGCGCGAAACGCCCAACCCTTCATGTGCGTCGCTATTGGCTTCTCTGGTT
GAGAAATACGGTGCGGATAGAGTGGAAATCCGCATGTTCCACACCCCGAA
TTTGACTGGGTTGAAGAAGAAATGGGTGCCTCGTCGGATCAACGAGGGCT
GGGGTCTCCAGCACATGAAGCTATACGGCTTTGACGAGGAAATCATTCTG
TCAGGAGCAAATCTCTCCAGCGACTACTTCACGAACCGCCTGGACCGATA
CCACGTCTTCCACTCCAAGGAGCTGACCGACTACTACGCCGGCATCCACA
ATGCAGTATGCAGTCTCAGCTTCCAAGTCCTCCCCGACTCTCAAAACGCC
GCAGGCTACCTCCTCAACTGGCCCGCATCTAACGGTGCGCCTTCACCTCT
CGACGACCCGGAGGACTTCATCACCTATTCATCCACCGTCCTGAGCCCTC
TCATCCAGCCCTCACTGAAGCAATCCACTCTGTCCCCCAAATCCCCCGAC
CAAACCTACATCTACCCCGTCGCTCAATTTACCTCCCTCTTCAAATCCAA
CGACACCTCGACCGAATTCCCCGCCGTCACCACCATCCTCCGTCTCTTGT
CCACCTCGCCCGCCTTCTCCGGCGCCCGCTGGCTCTTCACAGCCGGCTAC
TTCAACATCCACCCTGTCCTCTCCTCTCTCCTTATCGCCAGCACCTCCAC
CTCCCACACCGACTCCACCACCCGAGGCACCGTCCTAACCGCCTCCCCCT
GGGCCAACGGCTTCTACGGCTCCCCCGGTATCTCTGGCATGCTGCCGGCA
GCATACACGCACCTGTCCGCGCGGTTTCTTGATCGCGTCGCCGACGCCCA
GCGCACCAACTCCATCCAGCTGAAAGAATGGCGCCGCGGCACTGTCGGCG
AGCCCGGTGGCTGGACTTACCATGCTAAGGGCCTCTGGATTACCCTCCCC
AAGGAGGAACATCCCAGTCTGACCTTCGTGGGTAGCAGTAACTACACGAA
GCGCAGCTATAGTCTGGATCTGGAGGTGGGAGCGCTCGTTGTCACGGGCG
ATGCAGAGCTGAAGCGTCAGTTGGGCGCCGAGACGGAGCGGCTGCAGGAG
GATGCGAAGGCCATTTCACGAGAGGATTTGAGGAGGACGGAGAGGAGGGT
TAGTTGGAGGGTAAGGTTGGCGATGTGGATTGTTGAGAAGGTGGGAGGGG
CGTTATAGATGTTCGGACGAATTGGGGGTAACACCCTGCGATGTGCTGCA
CGCAGACCAGCTGCCCGAAGAGTCCTACTATACGAGCGCAAATTCTCGGC
CAACACCTGCCATGCCAGTTCCAGCTCGCCTGCGACCTCAGCTGTGTCGC
CGTTAGGGAGCATCACGACCGAGTTGGATCGCATTTCGCCGTGCTTCGAG
GTGCCGGCGTCGCGGATTACAATCTTGGACTCCCCGGCTAGCTTCTACAA
CACGCTCAAGGACAAAATCAAGAAGGCTCGCAAACGTATCTACCTCTCAA
CGTTGTACATCGGCAAGACGGAGCATGACCTGATCGAGACGTTGGACCAA
GCTCTCGCGGCCAACCCCGAGCTCAAGGTCTCCATCCTCACGGACGCTCT
ACGAGGAACGCGCGAAACGCCCAACCCTTCATGTGCGTCGCTATTGGCTT
CTCTGGTTGAGAAATACGGTGCGGATAGAGTGGAAATCCGCATGTTCCAC
ACCCCGAATTTGACTGGGTTGAAGAAGAAATGGGTGCCTCGTCGGATCAA
CGAGGGCTGGGGTCTCCAGCACATGAAGCTATACGGCTTTGACGAGGAAA
TCATTCTGTCAGGAGCAAATCTCTCCAGCGACTACTTCACGAACCGCCTG
GACCGATACCACGTCTTCCACTCCAAGGAGCTGACCGACTACTACGCCGG
CATCCACAATGCAGTATGCAGTCTCAGCTTCCAAGTCCTCCCCGACTCTC
AAAACGCCGCAGGCTACCTCCTCAACTGGCCCGCATCTAACGGTGCGCCT
TCACCTCTCGACGACCCGGAGGACTTCATCACCTATTCATCCACCGTCCT
GAGCCCTCTCATCCAGCCCTCACTGAAGCAATCCACTCTGTCCCCCAAAT
CCCCCGACCAAACCTACATCTACCCCGTCGCTCAATTTACCTCCCTCTTC
AAATCCAACGACACCTCGACCGAATTCCCCGCCGTCACCACCATCCTCCG
TCTCTTGTCCACCTCGCCCGCCTTCTCCGGCGCCCGCTGGCTCTTCACAG
CCGGCTACTTCAACATCCACCCTGTCCTCTCCTCTCTCCTTATCGCCAGC
ACCTCCACCTCCCACACCGACTCCACCACCCGAGGCACCGTCCTAACCGC
CTCCCCCTGGGCCAACGGCTTCTACGGCTCCCCCGGTATCTCTGGCATGC
TGCCGGCAGCATACACGCACCTGTCCGCGCGGTTTCTTGATCGCGTCGCC
GACGCCCAGCGCACCAACTCCATCCAGCTGAAAGAATGGCGCCGCGGCAC
TGTCGGCGAGCCCGGTGGCTGGACTTACCATGCTAAGGGCCTCTGGATTA
CCCTCCCCAAGGAGGAACATCCCAGTCTGACCTTCGTGGGTAGCAGTAAC
TACACGAAGCGCAGCTATAGTCTGGATCTGGAGGTGGGAGCGCTCGTTGT
CACGGGCGATGCAGAGCTGAAGCGTCAGTTGGGCGCCGAGACGGAGCGGC
TGCAGGAGGATGCGAAGGCCATTTCACGAGAGGATTTGAGGAGGACGGAG
AGGAGGGTTAGTTGGAGGGTAAGGTTGGCGATGTGGATTGTTGAGAAGGT
GGGAGGGGCGTTATAGATGTTCGGACGAATTGGGGGTAACACCCTGCGAT
GTGCTGCACGCAGACCAGCTGCCCGAAGAGTCCTACTATACGAGCGCAAA
TTCTCGGCCAACACCTGCCATGCCAGTTCCAGCTCGCCTGCGACCTCAGC
TGTGTCGCCGTTAGGGAGCATCACGACCGAGTTGGATCGCATTTCGCCGT
GCTTCGAGGTGCCGGCGTCGCGGATTACAATCTTGGACTCCCCGGCTAGC
TTCTACAACACGCTCAAGGACAAAATCAAGAAGGCTCGCAAACGTATCTA
CCTCTCAACGTTGTACATCGGCAAGACGGAGCATGACCTGATCGAGACGT
TGGACCAAGCTCTCGCGGCCAACCCCGAGCTCAAGGTCTCCATCCTCACG
GACGCTCTACGAGGAACGCGCGAAACGCCCAACCCTTCATGTGCGTCGCT
ATTGGCTTCTCTGGTTGAGAAATACGGTGCGGATAGAGTGGAAATCCGCA
TGTTCCACACCCCGAATTTGACTGGGTTGAAGAAGAAATGGGTGCCTCGT
CGGATCAACGAGGGCTGGGGTCTCCAGCACATGAAGCTATACGGCTTTGA
CGAGGAAATCATTCTGTCAGGAGCAAATCTCTCCAGCGACTACTTCACGA
ACCGCCTGGACCGATACCACGTCTTCCACTCCAAGGAGCTGACCGACTAC
TACGCCGGCATCCACAATGCAGTATGCAGTCTCAGCTTCCAAGTCCTCCC
CGACTCTCAAAACGCCGCAGGCTACCTCCTCAACTGGCCCGCATCTAACG
GTGCGCCTTCACCTCTCGACGACCCGGAGGACTTCATCACCTATTCATCC
ACCGTCCTGAGCCCTCTCATCCAGCCCTCACTGAAGCAATCCACTCTGTC
CCCCAAATCCCCCGACCAAACCTACATCTACCCCGTCGCTCAATTTACCT
CCCTCTTCAAATCCAACGACACCTCGACCGAATTCCCCGCCGTCACCACC
ATCCTCCGTCTCTTGTCCACCTCGCCCGCCTTCTCCGGCGCCCGCTGGCT
CTTCACAGCCGGCTACTTCAACATCCACCCTGTCCTCTCCTCTCTCCTTA
TCGCCAGCACCTCCACCTCCCACACCGACTCCACCACCCGAGGCACCGTC
CTAACCGCCTCCCCCTGGGCCAACGGCTTCTACGGCTCCCCCGGTATCTC
TGGCATGCTGCCGGCAGCATACACGCACCTGTCCGCGCGGTTTCTTGATC
GCGTCGCCGACGCCCAGCGCACCAACTCCATCCAGCTGAAAGAATGGCGC
CGCGGCACTGTCGGCGAGCCCGGTGGCTGGACTTACCATGCTAAGGGCCT
CTGGATTACCCTCCCCAAGGAGGAACATCCCAGTCTGACCTTCGTGGGTA
GCAGTAACTACACGAAGCGCAGCTATAGTCTGGATCTGGAGGTGGGAGCG
CTCGTTGTCACGGGCGATGCAGAGCTGAAGCGTCAGTTGGGCGCCGAGAC
GGAGCGGCTGCAGGAGGATGCGAAGGCCATTTCACGAGAGGATTTGAGGA
GGACGGAGAGGAGGGTTAGTTGGAGGGTAAGGTTGGCGATGTGGATTGTT
GAGAAGGTGGGAGGGGCGTTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006861-T1.utr5p1 | KJC3_006861-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006861-T1.utr3p1 | KJC3_006861-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261ICI |
| DBxref | InterPro:IPR025202 |
| DBxref | InterPro:IPR001736 |
| DBxref | PFAM:PF13091 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:666421..668300 + |
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