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KJC3_006884-T1, KJC3_006884-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006884-T1
Unique NameKJC3_006884-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:737905..739036+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006884-T1 ID=KJC3_006884-T1|Name=KJC3_006884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1132bp|location=Sequence derived from alignment at ch5:737905..739036+ (Aspergillus niger KJC3)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGGTAAGTCGTGTGTGCGTTTTCTGGTTTTGTGTCCTATTCCTCCTCC
CTGTCTCCCCCCAATCGGTTTGCGAAAGGGGTTTCCTTTCTACCTGCATT
GTATCTGCTCGTTTATTCCTGTCTTACAATGTTTATTCATCACGGATTGG
AATCGTCGGAGAGCTGGAGGATGGGATGAAGTCGTGTTGTTGTTCTCCGA
TTTCTGCCTACTTGCATATTTCTCAGCCGCCAGTTTCGAAGCTAAACTAA
CCATCTCCTCTTCACACTTTAGCTCTCCAAGTACCCTGTCCTCAACAACT
TGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTC
GGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGT
CAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGT
TCACCGCCGGAAAGGCCGACGACACACAGGTATGCTCCATCTCTTTATTC
CCTACTGTTTTCTTAGATGATAATTGTGCTGATGATCGTGACCCTGCGTT
TAGTGGTTGACGGTATGTTTCTCGTGATCCCCGTTATCGCGACATGACTC
GGGCGTTTCATACGCCTAGGTTATCTTTCTGCACGTGACGACGTGCGCTC
GTCAGCTAGCGGTTATACTGATTGGCATGTGATTCTTCTAGTACTGGGTT
GTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTG
GTTCCGTAAGTATTCGCAACGTTTGATGTGATTCCTACAGTGGAAAGTAC
ATAAACTGATCGCGACGCTTCAACACAGCCTTCTACTATATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAAGTAAGCTATCCACT
TCCCGCAGCTCCGAAACCCATTATTATTATCATCACCAGAACTCCGACTG
ACCCTCTTCTCCAGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCC
CGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCG
CCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA
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Coding sequence (CDS) from alignment at ch5:737905..739036+

>KJC3_006884-T1 ID=KJC3_006884-T1|Name=KJC3_006884-T1|organism=Aspergillus niger KJC3|type=CDS|length=2505bp|location=Sequence derived from alignment at ch5:737905..739036+ (Aspergillus niger KJC3)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGC
GCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCGC
CCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTCT
TCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCC
ACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTA
AATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACA
AGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCC
GTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTT
GGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCC
TCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCC
GACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAG
CGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCG
CCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTC
TTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTC
CACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGT
AAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGAC
AAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTC
CGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCT
TGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTC
CTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGC
CGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGA
GCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTC
GCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGT
CTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTT
CCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAG
TAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGA
CAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCT
CCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTC
TTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTT
CCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGG
CCGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAG
AGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTG
TCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGT
TCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCA
GTAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCG
ACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACC
TCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTT
CTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTT
TCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAG
GCCGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGA
GAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGT
TCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTT
GTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGG
TTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACC
AGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YOP1KJC3_006884Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006884-T1KJC3_006884-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006884-T1.exon1KJC3_006884-T1.exon1Aspergillus niger KJC3exon
KJC3_006884-T1.exon2KJC3_006884-T1.exon2Aspergillus niger KJC3exon
KJC3_006884-T1.exon3KJC3_006884-T1.exon3Aspergillus niger KJC3exon
KJC3_006884-T1.exon4KJC3_006884-T1.exon4Aspergillus niger KJC3exon
KJC3_006884-T1.exon5KJC3_006884-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006884-T1.cdsKJC3_006884-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264USX
DBxrefInterPro:IPR004345
DBxrefPFAM:PF03134
ProductER membrane protein DP1/Yop1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:737905..739036 +
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