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KJC3_006885-T1, KJC3_006885-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006885-T1
Unique NameKJC3_006885-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:739675..741162-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006885-T1 ID=KJC3_006885-T1|Name=KJC3_006885-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1488bp|location=Sequence derived from alignment at ch5:739675..741162- (Aspergillus niger KJC3)
CCTTTCTTTCTCCTCCATATATAACTCTGCCCTTCAGAATCCTTGAATAC
ACATGGATTATATCCCCAGCAAACCATGCCTCCCCCATAAACCTTTCTCC
ATGCCAACATCTCCACACCGGTCCTAGTCAATCAATCCCGCTCTGTCCCC
CTCCCTCCCCCCCGAACGCCAGCGTCATCGCCATCACTGGTTCCTCCCCC
TTCAACCCCAGACTCGATCTGATCCATCCTTCGACTAAACACGTCGGAAC
CCCTTCCCCGCTGGACAGCTCAGCTTGGAACTTAACTGGACCGTCACTTG
TGCTTGCCGATTGCTGAGCTCAGTTAATTTCTCCATTTTAAACAAGAGGG
TGGCACCGGTCGCTGCCCCCATCAAGATGGAGCCCCGCAAAACGCCCCCG
GAGTACTTTTTGGAGATCTTCGCAGATACCACCAACGTCCGCGACGTGTT
AAAAGGTGAGTCAGTTCTTCTCTTCACTGAATCGTCCTCTCTATAACTAC
AAAACCTAAATACTAACATCTCCTCTCCACAAACAGGTATTCTCAACACC
ATCTTCTTCCACCGATACTTCCCCTCCATCCGCCCAATCACCTTCGACGT
CCTCGACTTCACCCTCCCCGCCATCAACGACGTAGACCTCGAAACCCTCA
TCGACTCCCGTGTGAGTTCCCTCGTCCGCCAGCACTCCTCCGCCGCCAGC
GCCCCCGATGGCGGCGGCGGGGGTGTCCGGGCACGGATGGCTGTGGAATT
CTACGAAAAGCGACGTCGACGACCGGGAATCTGGTTTGGCGGACTATCAG
GGAAGGGCGAGGAAGAAGTATGCTGGGAAGTGTGGAATTTGGACGTGACG
ATAGCCACTCCTCGAACAGAGTCTGGTATGGACGCAACCCAACCCACCCC
CCCATCCGCCAAGCTATTGCCTCTCTCTCCCCTGTGCTGACATGTGATTG
CCGGGTCTAGAACGCGCCAAAGTGCGCAAAGCAATGGAGAATATGCTTCA
GAAAGCCGTCCTGAAGATCCTAGCCGTGGTTAACCGCGATAAGGAGCACA
TTCCCCCGATCACTACGAGCGATTCGAATCCGTTTCCTTATCGCGTGGTT
TTGAACCCGAGATCGGATGGTTGGCAGAATCGCTTTGGGTTATACTGATG
CAGGCTACCTACCTCCCTACCTACTACTCCTCTACTGCTTTTTTCCTTCC
AATCACACACAAAAAAATGTGCCCAGGCTACGGTCACCTGGACGCGATAT
TGATATGATATACATGATGACAATCCGAAGGGCAGGCTGGCGCGGCAGGG
CACGTCTGGGGATGCATATGGAATGCTACCTATGTCATAGTATGTGTTTG
CCCAGGAGTAGCAGCCTGCCGCCACCCCTGGTCCGTTTCCATTCCGGCGT
CGGTGGCATTCACAACAACAACAACCAGCTTTGATTCTCTTGCAAGTGTA
TTTTATCCCGCTTCTTTTTGTCCCCTTTATCATATGCG
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Coding sequence (CDS) from alignment at ch5:739675..741162-

>KJC3_006885-T1 ID=KJC3_006885-T1|Name=KJC3_006885-T1|organism=Aspergillus niger KJC3|type=CDS|length=1818bp|location=Sequence derived from alignment at ch5:739675..741162- (Aspergillus niger KJC3)
AACGCGCCAAAGTGCGCAAAGCAATGGAGAATATGCTTCAGAAAGCCGTC
CTGAAGATCCTAGCCGTGGTTAACCGCGATAAGGAGCACATTCCCCCGAT
CACTACGAGCGATTCGAATCCGTTTCCTTATCGCGTGGTTTTGAACCCGA
GATCGGATGGTTGGCAGAATCGCTTTGGGTTATACTGAGTATTCTCAACA
CCATCTTCTTCCACCGATACTTCCCCTCCATCCGCCCAATCACCTTCGAC
GTCCTCGACTTCACCCTCCCCGCCATCAACGACGTAGACCTCGAAACCCT
CATCGACTCCCGTGTGAGTTCCCTCGTCCGCCAGCACTCCTCCGCCGCCA
GCGCCCCCGATGGCGGCGGCGGGGGTGTCCGGGCACGGATGGCTGTGGAA
TTCTACGAAAAGCGACGTCGACGACCGGGAATCTGGTTTGGCGGACTATC
AGGGAAGGGCGAGGAAGAAGTATGCTGGGAAGTGTGGAATTTGGACGTGA
CGATAGCCACTCCTCGAACAGAGTCTGATGGAGCCCCGCAAAACGCCCCC
GGAGTACTTTTTGGAGATCTTCGCAGATACCACCAACGTCCGCGACGTGT
TAAAAGAACGCGCCAAAGTGCGCAAAGCAATGGAGAATATGCTTCAGAAA
GCCGTCCTGAAGATCCTAGCCGTGGTTAACCGCGATAAGGAGCACATTCC
CCCGATCACTACGAGCGATTCGAATCCGTTTCCTTATCGCGTGGTTTTGA
ACCCGAGATCGGATGGTTGGCAGAATCGCTTTGGGTTATACTGAGTATTC
TCAACACCATCTTCTTCCACCGATACTTCCCCTCCATCCGCCCAATCACC
TTCGACGTCCTCGACTTCACCCTCCCCGCCATCAACGACGTAGACCTCGA
AACCCTCATCGACTCCCGTGTGAGTTCCCTCGTCCGCCAGCACTCCTCCG
CCGCCAGCGCCCCCGATGGCGGCGGCGGGGGTGTCCGGGCACGGATGGCT
GTGGAATTCTACGAAAAGCGACGTCGACGACCGGGAATCTGGTTTGGCGG
ACTATCAGGGAAGGGCGAGGAAGAAGTATGCTGGGAAGTGTGGAATTTGG
ACGTGACGATAGCCACTCCTCGAACAGAGTCTGATGGAGCCCCGCAAAAC
GCCCCCGGAGTACTTTTTGGAGATCTTCGCAGATACCACCAACGTCCGCG
ACGTGTTAAAAGAACGCGCCAAAGTGCGCAAAGCAATGGAGAATATGCTT
CAGAAAGCCGTCCTGAAGATCCTAGCCGTGGTTAACCGCGATAAGGAGCA
CATTCCCCCGATCACTACGAGCGATTCGAATCCGTTTCCTTATCGCGTGG
TTTTGAACCCGAGATCGGATGGTTGGCAGAATCGCTTTGGGTTATACTGA
GTATTCTCAACACCATCTTCTTCCACCGATACTTCCCCTCCATCCGCCCA
ATCACCTTCGACGTCCTCGACTTCACCCTCCCCGCCATCAACGACGTAGA
CCTCGAAACCCTCATCGACTCCCGTGTGAGTTCCCTCGTCCGCCAGCACT
CCTCCGCCGCCAGCGCCCCCGATGGCGGCGGCGGGGGTGTCCGGGCACGG
ATGGCTGTGGAATTCTACGAAAAGCGACGTCGACGACCGGGAATCTGGTT
TGGCGGACTATCAGGGAAGGGCGAGGAAGAAGTATGCTGGGAAGTGTGGA
ATTTGGACGTGACGATAGCCACTCCTCGAACAGAGTCTGATGGAGCCCCG
CAAAACGCCCCCGGAGTACTTTTTGGAGATCTTCGCAGATACCACCAACG
TCCGCGACGTGTTAAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006885KJC3_006885Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006885-T1KJC3_006885-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006885-T1.cdsKJC3_006885-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006885-T1.utr3p1KJC3_006885-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006885-T1.exon3KJC3_006885-T1.exon3Aspergillus niger KJC3exon
KJC3_006885-T1.exon2KJC3_006885-T1.exon2Aspergillus niger KJC3exon
KJC3_006885-T1.exon1KJC3_006885-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006885-T1.utr5p1KJC3_006885-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012445
DBxrefPFAM:PF07855
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:739675..741162 -
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