You are here

Home

KJC3_006889-T1, KJC3_006889-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006889-T1
Unique NameKJC3_006889-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:748605..750515+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006889-T1 ID=KJC3_006889-T1|Name=KJC3_006889-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1911bp|location=Sequence derived from alignment at ch5:748605..750515+ (Aspergillus niger KJC3)
TGAAAGGCTGCCCGCCTGGACGCTTCTCCGCCTTCCGCTCACAGCCCGCC
TGACCGCCTTCAACTTTTTTTCGTGGAATTTTCCCTCCACCTGCCCGATA
ATCTCCCTGCCAGTCTATTCTCTCTCCGCGGCGTCGCATTTCCCTTCAAT
TCCTTATCCAGACATAATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGC
GCGCTTCCGATCGCCATGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTG
CAAGATCTGCCTCCGCTGGCCTCCAGCGTCGTCGAGGATGATAGCGAACT
AGCTCCGGTGATCAGTATGCTGCACCTTTTCACACATTAACTTTCTTACC
TTCACGGCATATTCATATGAAATGGGAAAGGTCTAATATAATCCACTGCA
GTCACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATA
CCTCAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCA
TCGTCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGAC
TTCGTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTA
CGTCGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGC
GGAAGATGACTCTGCGTGGCGCCGTTCGCAAGATGAGAGCCATTGAAGAA
GAGGAAGAGGAGGAGAGTGACGAGGAAGAAATGGTACGCTCAATCCTCTC
CTCTACGCTCTTCACTCGGACTATAAGCTGACCCTTCACCCTTCAAATAG
AAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACACCTTCGGTACCAA
ACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCA
ACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCA
ATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGACCGCCGCCCTGCA
AGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCG
CGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTCCCCAACGGCCTG
GCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCAAGACAGCGTTAA
CTCCGGCGCCGCCGTCAACACCACCTCGCGGTACGTCTCCCGCCGCGTCG
AAGCCGTCGCCCTCTCCGGAAACACCACCCACCTCCAAATCCTCCGCTTC
ATCCTCCTCCTCCTGGAACTCGCCCGCGGTCTCCGTCCCGGCCGCGACAA
GTCCGCCGGCCCAGGCAGCAAGCGTCTTCCTCCCCGCGAAGACCTCCGCC
GCATCCTCTCCGGTGGAACAACCAGCGAGAACTCCGCCAGCGGCGAACAG
CTCGCGGACCCCGTCATCGACGCCGTGCGCCGCAAGTTCGCGCCCCAGGG
TGCTTCCCTCTCCAAGAACGACATCACCTTCCTCCACACTACCATCTGCG
CCCTGTCGCTGCACATCCCACCCCAACCTTCCAAGGATGGCGGCAATAGC
TCCGCCGGCGGAAACGCCCCCAACGAGCTGGCCACCGATCCCTCGGATCT
CCGTGATGATCTGCGCCTGGATAACGTCGCTATCACGCAGTACTTCCGCG
AGTTGGGCTGCCGCGTCGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGG
GGTATCAAGGGTGGTAAGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTT
GAAGATTCCAGTTGAGTTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGT
AGATGGATTCAATTGGGAATGGAATTCGTTGTGATTGATTGATTGTGTAA
GTTAGCATTATTTCTCTGTATGTATGGATGGATACAAAAGAACGTCGTTT
TCTCTCTTCCA
back to top

Coding sequence (CDS) from alignment at ch5:748605..750515+

>KJC3_006889-T1 ID=KJC3_006889-T1|Name=KJC3_006889-T1|organism=Aspergillus niger KJC3|type=CDS|length=4446bp|location=Sequence derived from alignment at ch5:748605..750515+ (Aspergillus niger KJC3)
ATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCA
TGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGC
TGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCATC
ACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCT
CAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCG
TCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTC
GTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGT
CGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGA
AGATGACTCTGCGTGGCGCCGTTCGCAAGATGAGAGCCATTGAAGAAGAG
GAAGAGGAGGAGAGTGACGAGGAAGAAATGAAAACTATGCGCGCTCAAAG
AACAGAGCTCACCAACACCTTCGGTACCAAACAATCCCGCAAGGCCGCTC
AATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGCCCTCAGGCGCCGCC
TCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCCGCCGACGCAGCCAC
AGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGA
AGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACCCGTCAGAAGTCTAC
CCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACTCTGCGCCAACTTCC
CAACATCAAAGAATGGCAAGACAGCGTTAACTCCGGCGCCGCCGTCAACA
CCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCGTCGCCCTCTCCGGA
AACACCACCCACCTCCAAATCCTCCGCTTCATCCTCCTCCTCCTGGAACT
CGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGCCGGCCCAGGCAGCA
AGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAACA
ACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATCGA
CGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAACG
ACATCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACATCCCA
CCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCCCC
CAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGATGATCTGCGCCTGG
ATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGGGCTGCCGCGTCGAC
AAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAAGGC
TGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGTTCC
CGAAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCCGTCCGATAAGGTT
GAAAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGAGGCCCAGCAAGAA
GCCCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCCTCCAGCGTCGTCG
AGGATGATAGCGAACTAGCTCCGGTGATCATCACTACTCCCGGTCTCAAC
GCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGCAAAAC
CTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATTGCTGC
TACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGGCCGAG
GAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGACCCGGA
GAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCGTGGCG
CCGTTCGCAAGATGAGAGCCATTGAAGAAGAGGAAGAGGAGGAGAGTGAC
GAGGAAGAAATGAAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACAC
CTTCGGTACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACG
CCCAGCTCTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCC
ATTCTGGGCGCAATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGAC
CGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTA
ACCTGGACGCCGCGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTC
CCCAACGGCCTGGCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCA
AGACAGCGTTAACTCCGGCGCCGCCGTCAACACCACCTCGCGGTACGTCT
CCCGCCGCGTCGAAGCCGTCGCCCTCTCCGGAAACACCACCCACCTCCAA
ATCCTCCGCTTCATCCTCCTCCTCCTGGAACTCGCCCGCGGTCTCCGTCC
CGGCCGCGACAAGTCCGCCGGCCCAGGCAGCAAGCGTCTTCCTCCCCGCG
AAGACCTCCGCCGCATCCTCTCCGGTGGAACAACCAGCGAGAACTCCGCC
AGCGGCGAACAGCTCGCGGACCCCGTCATCGACGCCGTGCGCCGCAAGTT
CGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACATCACCTTCCTCCACA
CTACCATCTGCGCCCTGTCGCTGCACATCCCACCCCAACCTTCCAAGGAT
GGCGGCAATAGCTCCGCCGGCGGAAACGCCCCCAACGAGCTGGCCACCGA
TCCCTCGGATCTCCGTGATGATCTGCGCCTGGATAACGTCGCTATCACGC
AGTACTTCCGCGAGTTGGGCTGCCGCGTCGACAAGCCCCGCGAGTCGGAG
TTTGCTAAATGGGGTATCAAGGGTGGTAAGGCTGAGGCTGCGGCTAGACG
GGTTGCTAGGTTGAAGATTCCAGTTGAGTTCCCGAAGGTTAGTCGTGGTG
GTGGACGGAGGTAGATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGC
GCTTCCGATCGCCATGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCA
AGATCTGCCTCCGCTGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAG
CTCCGGTGATCATCACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGC
CTCAACCCATACCTCAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACG
GAACAAGGGCATCGTCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACC
CCAAGCTGGACTTCGTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAA
CTGAAGCACTACGTCGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTT
CATCGAAGTGCGGAAGATGACTCTGCGTGGCGCCGTTCGCAAGATGAGAG
CCATTGAAGAAGAGGAAGAGGAGGAGAGTGACGAGGAAGAAATGAAAACT
ATGCGCGCTCAAAGAACAGAGCTCACCAACACCTTCGGTACCAAACAATC
CCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGC
CCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCC
GCCGACGCAGCCACAGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCA
GGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACC
CGTCAGAAGTCTACCCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACT
CTGCGCCAACTTCCCAACATCAAAGAATGGCAAGACAGCGTTAACTCCGG
CGCCGCCGTCAACACCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCG
TCGCCCTCTCCGGAAACACCACCCACCTCCAAATCCTCCGCTTCATCCTC
CTCCTCCTGGAACTCGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGC
CGGCCCAGGCAGCAAGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCC
TCTCCGGTGGAACAACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCG
GACCCCGTCATCGACGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTC
CCTCTCCAAGAACGACATCACCTTCCTCCACACTACCATCTGCGCCCTGT
CGCTGCACATCCCACCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCC
GGCGGAAACGCCCCCAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGA
TGATCTGCGCCTGGATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGG
GCTGCCGCGTCGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATC
AAGGGTGGTAAGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGAT
TCCAGTTGAGTTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006889KJC3_006889Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006889-T1KJC3_006889-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006889-T1.utr5p1KJC3_006889-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006889-T1.exon1KJC3_006889-T1.exon1Aspergillus niger KJC3exon
KJC3_006889-T1.exon2KJC3_006889-T1.exon2Aspergillus niger KJC3exon
KJC3_006889-T1.exon3KJC3_006889-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006889-T1.cdsKJC3_006889-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006889-T1.utr3p1KJC3_006889-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262BVA
DBxrefInterPro:IPR009668
DBxrefPFAM:PF06870
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:748605..750515 +
Powered by Drupal