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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:772485..775254- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006895-T1 ID=KJC3_006895-T1|Name=KJC3_006895-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2770bp|location=Sequence derived from alignment at ch5:772485..775254- (Aspergillus niger KJC3) GGGAATGTCTCCTCTTCATTTCTCTGCAGTAAGCTGTTGTTCTGATCTGT
CCAGCATGGAGCAAGACTAGGAACCCCAAGGGTTGATCTTCGTGCCATAC
CTCCTATTTACAGTATACTGCTCCCCGAGCGCTTCACTTTTCCTGAACAC
AGACTCGCGTGTCCACGACCGCCTCTTGCCGAATCCCTAAGAATCCAGCC
ACGTTCCAGCAGCTTGATTGGGATCATCTCACACTATATTGCACTACCAC
TTGCTTCAACCTCCGTCAGGAAGAAGCCACAGAACGGTTGCATTCCATAC
TGGACTAGCTTGTGTACCACGGCCTTTCCAAACCCTTGGATCTATCTATC
CACGTCTAATCAGTTTATATACTACTAGACCGTGTGTGCTATCTTCGGGG
CTTTTTCTATCCCATGAATGACTAACGCAGGAAGACCTGATCGTACCACA
CACACGCGCGGTAATTTCTCCTGAATTCCCCGACTGTTAGCAGGGGATCG
TTGTGTCCAGCAACGCTGCTGCTAGCTAGATCAAATGCCAGAAACGCATG
AGCGGTTCGCTGATGAAACATCCCCTTTGGTGGGAGCATCTGACAATAAT
CAAGTGCATTCGATGTCAAGAAATGGAGATAACAACGGGACCAGCGGGGC
TGGAGATGCTCACCATCTGTCCGAGACGAAGAGCAGCTGGTACCTGTTTT
TGTTGACTTTGAGCATTGGCGGGTAGGTAACAAGTCTGTCCCGTTGGCGA
TGTAATCTAGGGCTGTTTCTGTGTGTTGTATAGCTTTTGCCCGAAGCTAA
CGAGGTTTGTTATTCTAGTCTCCAGGTTGTGTGGTCCACTGAGCTGTCGA
ATGGATCGGTAAGCTACCACTGTTTATCGGACCCTACATGGGAATAGGGG
CTAATTCTGTTGTATGAGCATAGCCCTACCTCCTGTCTCTTGGAATGAGC
AAGGCTCTGCTTGCATTCGTTTGGATTGCTGGCCCTATAACAGGTACCCT
TGTGCAGCCGTATATCGGCATTTGCAGCGACAACTGCCGCATTTCATGGG
GCAAGAGAAAGCCGTTCATGGTTGTGGGCGGCATTGCAACGGTCATTTCT
CTCCTTGCCCTCGCTTGGGTCAGGGAGATGACCGGAGGCTTCCTTGGGCT
TTTCGGTGTCGATCCAGCTTCTAGTGCAACGCGGACAGTGGTCATTGTAC
TGGCCACCATTTTGATGTACTGCCTCGACTTTTCTGTAAATACTGGTAGG
TCCCCTCTTGCTGCACTGATATGTGCAAACCTAAAGTGACTGTTCGGCTG
TAGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCAC
CAGCAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAA
CATTCTCGGATATATTTTTGGATACATGGATCTACCGAAATGGTTCCCGT
TCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCA
CTTGGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCC
CCGTCTAGATGGAACGCCTTCATCGGGGAACCCTGGGCTTGTAACATTCT
TCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAG
GTGTGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTT
CTATTCCACGACATATATCGGGCAGCTCTTTGTGAATCCGATCTTCGATG
GACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCT
ACGAGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGT
GACTAATTTGACGTTGCCTGTACTTGTTGTTCCAACCTACAAGTCGGCTG
TTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTC
CTAGGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGC
ACCCGCGCCCATCTTGGGAATCAACAAGGGTGATTCAGGGGAAGATAAGT
GGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTT
ATGTCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTA
TTCTTACCAAGCCGCAACGGTGGTGATCGGGATCGTAGGGATTTCGTGGG
CATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGC
ATTGACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTC
CGCTGAGCAGCCTCGCAATGATACAAGTTTACCAGCTCGCGCCTCTACCG
ACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGG
GAAGTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACT
GCACAATGTGGCCATCTCAGCGCCACAAATCATCTCGAGTCTAATTTCTA
GTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGAT
AGTGTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGC
TGTGCTGACCAGCAGGCTTACCGAGGGAGCACGGGGAGTGCCTGTTTCAT
CGTAGGATTGCTCTTATTGGGGTGGAGTAACAGACAGAAAGATAGTAATA
TCAATATTACACACTGATGGGAGAGTGACCAGAATCTGGAACACCAGGCC
GAAGTGGGAAAGAATAGTAA back to topCoding sequence (CDS) from alignment at ch5:772485..775254- >KJC3_006895-T1 ID=KJC3_006895-T1|Name=KJC3_006895-T1|organism=Aspergillus niger KJC3|type=CDS|length=7608bp|location=Sequence derived from alignment at ch5:772485..775254- (Aspergillus niger KJC3) TGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCACCAG CAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAACAT TCTCGGATATATTTTTGGATACATGGATCTACCGAAATGGTTCCCGTTCT TGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCACTT GGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCCCCG TCTAGATGGAACGCCTTCATCGGGGAACCCTGGGCTTGTAACATTCTTCA AGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAGGTG TGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTTCTA TTCCACGACATATATCGGGCAGCTCTTTGTGAATCCGATCTTCGATGGAC ACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCTACG AGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGTGAC TAATTTGACGTTGCCTGTACTTGTTGTTCCAACCTACAAGTCGGCTGTTC CTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTCCTA GGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGCACC CGCGCCCATCTTGGGAATCAACAAGGGTGATTCAGGGGAAGATAAGTGGC TATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTTATG TCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTATTC TTACCAAGCCGCAACGGTGGTGATCGGGATCGTAGGGATTTCGTGGGCAT TGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGCATT GACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTCCGC TGAGCAGCCTCGCAATGATACAAGTTTACCAGCTCGCGCCTCTACCGACG AGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGGGAA GTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACTGCA CAATGTGGCCATCTCAGCGCCACAAATCATCTCGAGTCTAATTTCTAGTG CGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGATAGT GTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGCTGT GCTGACCAGCAGGCTTACCGAGGGAGCACGGGGAGTGCCTGTTTCATCGT AGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATTCGTT TGGATTGCTGGCCCTATAACAGGTACCCTTGTGCAGCCGTATATCGGCAT TTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGTTCATGG TTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTGGGTC AGGGAGATGACCGGAGGCTTCCTTGGGCTTTTCGGTGTCGATCCAGCTTC TAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGATGTACT GCCTCGACTTTTCTGTAAATACTGTCTCCAGGTTGTGTGGTCCACTGAGC TGTCGAATGGATCGATGCCAGAAACGCATGAGCGGTTCGCTGATGAAACA TCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCATTCGATGTCAAG AAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCATCTGT CCGAGACGAAGAGCAGCTGGTACCTGTTTTTGTTGACTTTGAGCATTGGC GGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCACC AGCAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAAC ATTCTCGGATATATTTTTGGATACATGGATCTACCGAAATGGTTCCCGTT CTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCAC TTGGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCCC CGTCTAGATGGAACGCCTTCATCGGGGAACCCTGGGCTTGTAACATTCTT CAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAGG TGTGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTTC TATTCCACGACATATATCGGGCAGCTCTTTGTGAATCCGATCTTCGATGG ACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCTA CGAGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGTG ACTAATTTGACGTTGCCTGTACTTGTTGTTCCAACCTACAAGTCGGCTGT TCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTCC TAGGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGCA CCCGCGCCCATCTTGGGAATCAACAAGGGTGATTCAGGGGAAGATAAGTG GCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTTA TGTCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTAT TCTTACCAAGCCGCAACGGTGGTGATCGGGATCGTAGGGATTTCGTGGGC ATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGCA TTGACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTCC GCTGAGCAGCCTCGCAATGATACAAGTTTACCAGCTCGCGCCTCTACCGA CGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGGG AAGTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACTG CACAATGTGGCCATCTCAGCGCCACAAATCATCTCGAGTCTAATTTCTAG TGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGATA GTGTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGCT GTGCTGACCAGCAGGCTTACCGAGGGAGCACGGGGAGTGCCTGTTTCATC GTAGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATTCG TTTGGATTGCTGGCCCTATAACAGGTACCCTTGTGCAGCCGTATATCGGC ATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGTTCAT GGTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTGGG TCAGGGAGATGACCGGAGGCTTCCTTGGGCTTTTCGGTGTCGATCCAGCT TCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGATGTA CTGCCTCGACTTTTCTGTAAATACTGTCTCCAGGTTGTGTGGTCCACTGA GCTGTCGAATGGATCGATGCCAGAAACGCATGAGCGGTTCGCTGATGAAA CATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCATTCGATGTCA AGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCATCT GTCCGAGACGAAGAGCAGCTGGTACCTGTTTTTGTTGACTTTGAGCATTG GCGGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCA CCAGCAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTA ACATTCTCGGATATATTTTTGGATACATGGATCTACCGAAATGGTTCCCG TTCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGC ACTTGGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATC CCCGTCTAGATGGAACGCCTTCATCGGGGAACCCTGGGCTTGTAACATTC TTCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAA GGTGTGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCT TCTATTCCACGACATATATCGGGCAGCTCTTTGTGAATCCGATCTTCGAT GGACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGC TACGAGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTG TGACTAATTTGACGTTGCCTGTACTTGTTGTTCCAACCTACAAGTCGGCT GTTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTT CCTAGGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGG CACCCGCGCCCATCTTGGGAATCAACAAGGGTGATTCAGGGGAAGATAAG TGGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCT TATGTCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCT ATTCTTACCAAGCCGCAACGGTGGTGATCGGGATCGTAGGGATTTCGTGG GCATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCG CATTGACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCT CCGCTGAGCAGCCTCGCAATGATACAAGTTTACCAGCTCGCGCCTCTACC GACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGG GGAAGTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGAC TGCACAATGTGGCCATCTCAGCGCCACAAATCATCTCGAGTCTAATTTCT AGTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGA TAGTGTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGG CTGTGCTGACCAGCAGGCTTACCGAGGGAGCACGGGGAGTGCCTGTTTCA TCGTAGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATT CGTTTGGATTGCTGGCCCTATAACAGGTACCCTTGTGCAGCCGTATATCG GCATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGTTC ATGGTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTG GGTCAGGGAGATGACCGGAGGCTTCCTTGGGCTTTTCGGTGTCGATCCAG CTTCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGATG TACTGCCTCGACTTTTCTGTAAATACTGTCTCCAGGTTGTGTGGTCCACT GAGCTGTCGAATGGATCGATGCCAGAAACGCATGAGCGGTTCGCTGATGA AACATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCATTCGATGT CAAGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCAT CTGTCCGAGACGAAGAGCAGCTGGTACCTGTTTTTGTTGACTTTGAGCAT TGGCGGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCG CACCAGCAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGG TAACATTCTCGGATATATTTTTGGATACATGGATCTACCGAAATGGTTCC CGTTCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATC GCACTTGGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGA TCCCCGTCTAGATGGAACGCCTTCATCGGGGAACCCTGGGCTTGTAACAT TCTTCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCC AAGGTGTGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCT CTTCTATTCCACGACATATATCGGGCAGCTCTTTGTGAATCCGATCTTCG ATGGACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAA GCTACGAGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATT TGTGACTAATTTGACGTTGCCTGTACTTGTTGTTCCAACCTACAAGTCGG CTGTTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCC TTCCTAGGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGA GGCACCCGCGCCCATCTTGGGAATCAACAAGGGTGATTCAGGGGAAGATA AGTGGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGG CTTATGTCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCAT CTATTCTTACCAAGCCGCAACGGTGGTGATCGGGATCGTAGGGATTTCGT GGGCATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCC CGCATTGACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGT CTCCGCTGAGCAGCCTCGCAATGATACAAGTTTACCAGCTCGCGCCTCTA CCGACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCA GGGGAAGTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGG ACTGCACAATGTGGCCATCTCAGCGCCACAAATCATCTCGAGTCTAATTT CTAGTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGAT GATAGTGTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGC GGCTGTGCTGACCAGCAGGCTTACCGAGGGAGCACGGGGAGTGCCTGTTT CATCGTAGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCA TTCGTTTGGATTGCTGGCCCTATAACAGGTACCCTTGTGCAGCCGTATAT CGGCATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGT TCATGGTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCT TGGGTCAGGGAGATGACCGGAGGCTTCCTTGGGCTTTTCGGTGTCGATCC AGCTTCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGA TGTACTGCCTCGACTTTTCTGTAAATACTGTCTCCAGGTTGTGTGGTCCA CTGAGCTGTCGAATGGATCGATGCCAGAAACGCATGAGCGGTTCGCTGAT GAAACATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCATTCGAT GTCAAGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACC ATCTGTCCGAGACGAAGAGCAGCTGGTACCTGTTTTTGTTGACTTTGAGC ATTGGCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006895-T1.utr3p1 | KJC3_006895-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006895-T1.utr5p1 | KJC3_006895-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:772485..775254 - |
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