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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:815330..816223+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006907-T1 ID=KJC3_006907-T1|Name=KJC3_006907-T1|organism=Aspergillus niger KJC3|type=mRNA|length=894bp|location=Sequence derived from alignment at ch5:815330..816223+ (Aspergillus niger KJC3)
CATCGCTTGACAGTGGATTCGTTTATCTGTGAAACCGCAGATCGGACGGC
ATAGAAGGAGACGGGCCCCATCCAGGCCTACGTACTCTTTACTTAGTATC
TACACTATTCTCTCTCCACACCAGGCAGTCCAGGCATCTGTTTGAATCAT
TGCTAAGGCTATCCTGTGACATCTGGCAATTCCCTCTAACAGCCCGGGTT
CCACACATGGAGAAGATCAGATAGGAAGAACCCCCCCTGCATGCGCATAC
CATCATGCCACCACCCCAGCAAGCCACATCCTCCACCACAACGCCAGCTT
GTGACGAGCAGACGCAAAAAGAAAAGAAGCTGGTAACTACATACCCTCTA
CCATAAGCAGCAACACTTAACCAAAGTAAACAGTCCACCCTCCGCGCATC
CATCGCCAGTCTGCAATCCCAAATCACAGAAATAGAGTCGCAAATAGCAC
AGACCAAGGCCAAATTGAAGTATGAAACCAAGCAGCTCCGTAATCCTCTT
ACCATTCTCATTCGGGCACATAATTAGTATCCTCACATACTGACACTAAA
TCCAGAAATGACCCATCTACGACGGTCAAACGGCACATTCGTCTTCTCCA
TGAGTACAACGAAATCAAAGACATCGCCCAGGGATTGATGGGGTTGATTG
CGGATGCCCGTGGTGTACGGCAGGTGGACGTGCAGAGGGAGTATGAAGTG
GATGATGGGGATTGATTCATGCTCAAATGTTGAATGATGGGGTTATTCAT
TGATGCAGGCGTCCAAAATAGTTGTCACTTCTTTTGGTGTTCATTGACGG
GTAAATAGGTTTGATCATGGGTTTGTGGTTTGGCGTTTATGGATGGCGAG
AAATAATCTTCCTAGGCATACAGATGCAACAGTAGAGTCAGAGC back to topCoding sequence (CDS) from alignment at ch5:815330..816223+ >KJC3_006907-T1 ID=KJC3_006907-T1|Name=KJC3_006907-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch5:815330..816223+ (Aspergillus niger KJC3)
ATGCCACCACCCCAGCAAGCCACATCCTCCACCACAACGCCAGCTTGTGA
CGAGCAGACGCAAAAAGAAAAGAAGCTGTCCACCCTCCGCGCATCCATCG
CCAGTCTGCAATCCCAAATCACAGAAATAGAGTCGCAAATAGCACAGACC
AAGGCCAAATTGAAAAATGACCCATCTACGACGGTCAAACGGCACATTCG
TCTTCTCCATGAGTACAACGAAATCAAAGACATCGCCCAGGGATTGATGG
GGTTGATTGCGGATGCCCGTGGTGTACGGCAGGTGGACGTGCAGAGGGAG
TATGAAGTGGATGATGGGGATTGAATGCCACCACCCCAGCAAGCCACATC
CTCCACCACAACGCCAGCTTGTGACGAGCAGACGCAAAAAGAAAAGAAGC
TGTCCACCCTCCGCGCATCCATCGCCAGTCTGCAATCCCAAATCACAGAA
ATAGAGTCGCAAATAGCACAGACCAAGGCCAAATTGAAAAATGACCCATC
TACGACGGTCAAACGGCACATTCGTCTTCTCCATGAGTACAACGAAATCA
AAGACATCGCCCAGGGATTGATGGGGTTGATTGCGGATGCCCGTGGTGTA
CGGCAGGTGGACGTGCAGAGGGAGTATGAAGTGGATGATGGGGATTGAAT
GCCACCACCCCAGCAAGCCACATCCTCCACCACAACGCCAGCTTGTGACG
AGCAGACGCAAAAAGAAAAGAAGCTGTCCACCCTCCGCGCATCCATCGCC
AGTCTGCAATCCCAAATCACAGAAATAGAGTCGCAAATAGCACAGACCAA
GGCCAAATTGAAAAATGACCCATCTACGACGGTCAAACGGCACATTCGTC
TTCTCCATGAGTACAACGAAATCAAAGACATCGCCCAGGGATTGATGGGG
TTGATTGCGGATGCCCGTGGTGTACGGCAGGTGGACGTGCAGAGGGAGTA
TGAAGTGGATGATGGGGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006907-T1.utr5p1 | KJC3_006907-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006907-T1.utr3p1 | KJC3_006907-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010760 |
| DBxref | PFAM:PF07061 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:815330..816223 + |
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