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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:927342..927967+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006939-T1 ID=KJC3_006939-T1|Name=KJC3_006939-T1|organism=Aspergillus niger KJC3|type=mRNA|length=626bp|location=Sequence derived from alignment at ch5:927342..927967+ (Aspergillus niger KJC3)
ATGCGACCACCTCAAGCTAACCACGCCGGCAACGAAGTAAAGGGTGCCCC
TTCGACCAGCGACCGTCTATATCGATCTGAGAAAGAGCCACATCGCGCTT
CAATAAAAACATTCACAATGGAAAGCCTACTTGCACCGATTCAAGATGCT
TTGGAAGGTCAAATCGTGAGTTCTTGGGTTTCCTCTGCGCCCGCTGTTTG
GGTGATCGTTATTGCAGCCACCTATGCGTTTACTTCTATCTACCTATGCC
GAGTGAATGATTAACGTTTCCATCAATAGGACTTCCAAGGCCAGCGCATT
GCAGAGCTTCTTAGCACAGTGCTTCTTGTTCTGTCGGGTGTAAGTTCCTC
TCATATTATTCTACGGTGATGTTGGTGTTGTTGTCTTCTGGTCCGGTTGC
TTACTATTGTCGCTTTGTTAAGGCCGTTGCTTTCATTGTTGGATACATCT
TCCAGGATATTCATCTCACACTTTGGGTCGGATTGGCCGGCACGTTAATA
ACTGGGTTGGCCGTCATTCCGCCTTGGCCTATGTACAATAAGAATCCCGA
GAAATGGCTTGTTCCCTTGACGGCGGGCGTGGGAGGTGGTGCAGGCATCA
TGGTAGATGGAGTTAAGGTTGCGTGA back to topCoding sequence (CDS) from alignment at ch5:927342..927967+ >KJC3_006939-T1 ID=KJC3_006939-T1|Name=KJC3_006939-T1|organism=Aspergillus niger KJC3|type=CDS|length=1287bp|location=Sequence derived from alignment at ch5:927342..927967+ (Aspergillus niger KJC3)
ATGCGACCACCTCAAGCTAACCACGCCGGCAACGAAGTAAAGGGTGCCCC
TTCGACCAGCGACCGTCTATATCGATCTGAGAAAGAGCCACATCGCGCTT
CAATAAAAACATTCACAATGGAAAGCCTACTTGCACCGATTCAAGATGCT
TTGGAAGGTCAAATCGACTTCCAAGGCCAGCGCATTGCAGAGCTTCTTAG
CACAGTGCTTCTTGTTCTGTCGGGTGCCGTTGCTTTCATTGTTGGATACA
TCTTCCAGGATATTCATCTCACACTTTGGGTCGGATTGGCCGGCACGTTA
ATAACTGGGTTGGCCGTCATTCCGCCTTGGCCTATGTACAATAAGAATCC
CGAGAAATGGCTTGTTCCCTTGACGGCGGGCGTGGGAGGTGGTGCAGGCA
TCATGGTAGATGGAGTTAAGGTTGCGTGAATGCGACCACCTCAAGCTAAC
CACGCCGGCAACGAAGTAAAGGGTGCCCCTTCGACCAGCGACCGTCTATA
TCGATCTGAGAAAGAGCCACATCGCGCTTCAATAAAAACATTCACAATGG
AAAGCCTACTTGCACCGATTCAAGATGCTTTGGAAGGTCAAATCGACTTC
CAAGGCCAGCGCATTGCAGAGCTTCTTAGCACAGTGCTTCTTGTTCTGTC
GGGTGCCGTTGCTTTCATTGTTGGATACATCTTCCAGGATATTCATCTCA
CACTTTGGGTCGGATTGGCCGGCACGTTAATAACTGGGTTGGCCGTCATT
CCGCCTTGGCCTATGTACAATAAGAATCCCGAGAAATGGCTTGTTCCCTT
GACGGCGGGCGTGGGAGGTGGTGCAGGCATCATGGTAGATGGAGTTAAGG
TTGCGTGAATGCGACCACCTCAAGCTAACCACGCCGGCAACGAAGTAAAG
GGTGCCCCTTCGACCAGCGACCGTCTATATCGATCTGAGAAAGAGCCACA
TCGCGCTTCAATAAAAACATTCACAATGGAAAGCCTACTTGCACCGATTC
AAGATGCTTTGGAAGGTCAAATCGACTTCCAAGGCCAGCGCATTGCAGAG
CTTCTTAGCACAGTGCTTCTTGTTCTGTCGGGTGCCGTTGCTTTCATTGT
TGGATACATCTTCCAGGATATTCATCTCACACTTTGGGTCGGATTGGCCG
GCACGTTAATAACTGGGTTGGCCGTCATTCCGCCTTGGCCTATGTACAAT
AAGAATCCCGAGAAATGGCTTGTTCCCTTGACGGCGGGCGTGGGAGGTGG
TGCAGGCATCATGGTAGATGGAGTTAAGGTTGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005787 | signal peptidase complex |
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008233 | peptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006465 | signal peptide processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009542 |
| DBxref | PFAM:PF06645 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:927342..927967 + |
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