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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:928208..928760- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006940-T1 ID=KJC3_006940-T1|Name=KJC3_006940-T1|organism=Aspergillus niger KJC3|type=mRNA|length=553bp|location=Sequence derived from alignment at ch5:928208..928760- (Aspergillus niger KJC3)
ATGGCGGATGTGGAAATGAAAGAAGCCGGCTCCGCCGCCGTCAAAGCGAA
GGGCTCATCGAAAGCTTCCGAAGGTGCCAGTGACGGCAAGAAGAAGTTTG
AGGTTAAGAAGGTATAGCGCCAGAGACGTGGGCTTTCTCTCCGAGTACCG
TTGAAGCTAATTGGGTTGCTCCTCCAGTGGAACGCGGTCGCCCTGTGGGC
GTGGGATATCGTCGTCGACAACTGCGCAATTTGCCGTAACCACATCATGG
ATCTCTGTACGTCTCGGATCCTTCATGCCTTCCTGCAATACAGCGTCTAA
TGTCTAATCGTTGCTAGGTATCGAGTGCCAAGCCAACCAAGGTTCGTCTA
CGACTGAGGAGTGTACAGTCGCTTGGGGTATCTGCAACGTAAGTTCACTC
TTCCAGACACTCATTCTGCACCCCACACTAACGCCGACCTTTCTCGACCC
CTAGCACGCGTTCCACTTCCACTGCATCTCGCGATGGCTGAAAACCCGTC
AAGTTTGTCCCCTCGACAATAGGGACTGGGAGTTCCAGAAGTACGGCCGG
TAA back to topCoding sequence (CDS) from alignment at ch5:928208..928760- >KJC3_006940-T1 ID=KJC3_006940-T1|Name=KJC3_006940-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch5:928208..928760- (Aspergillus niger KJC3)
CACGCGTTCCACTTCCACTGCATCTCGCGATGGCTGAAAACCCGTCAAGT
TTGTCCCCTCGACAATAGGGACTGGGAGTTCCAGAAGTACGGCCGGTAAG
TATCGAGTGCCAAGCCAACCAAGGTTCGTCTACGACTGAGGAGTGTACAG
TCGCTTGGGGTATCTGCAACTGGAACGCGGTCGCCCTGTGGGCGTGGGAT
ATCGTCGTCGACAACTGCGCAATTTGCCGTAACCACATCATGGATCTCTA
TGGCGGATGTGGAAATGAAAGAAGCCGGCTCCGCCGCCGTCAAAGCGAAG
GGCTCATCGAAAGCTTCCGAAGGTGCCAGTGACGGCAAGAAGAAGTTTGA
GGTTAAGAAGCACGCGTTCCACTTCCACTGCATCTCGCGATGGCTGAAAA
CCCGTCAAGTTTGTCCCCTCGACAATAGGGACTGGGAGTTCCAGAAGTAC
GGCCGGTAAGTATCGAGTGCCAAGCCAACCAAGGTTCGTCTACGACTGAG
GAGTGTACAGTCGCTTGGGGTATCTGCAACTGGAACGCGGTCGCCCTGTG
GGCGTGGGATATCGTCGTCGACAACTGCGCAATTTGCCGTAACCACATCA
TGGATCTCTATGGCGGATGTGGAAATGAAAGAAGCCGGCTCCGCCGCCGT
CAAAGCGAAGGGCTCATCGAAAGCTTCCGAAGGTGCCAGTGACGGCAAGA
AGAAGTTTGAGGTTAAGAAGCACGCGTTCCACTTCCACTGCATCTCGCGA
TGGCTGAAAACCCGTCAAGTTTGTCCCCTCGACAATAGGGACTGGGAGTT
CCAGAAGTACGGCCGGTAAGTATCGAGTGCCAAGCCAACCAAGGTTCGTC
TACGACTGAGGAGTGTACAGTCGCTTGGGGTATCTGCAACTGGAACGCGG
TCGCCCTGTGGGCGTGGGATATCGTCGTCGACAACTGCGCAATTTGCCGT
AACCACATCATGGATCTCTATGGCGGATGTGGAAATGAAAGAAGCCGGCT
CCGCCGCCGTCAAAGCGAAGGGCTCATCGAAAGCTTCCGAAGGTGCCAGT
GACGGCAAGAAGAAGTTTGAGGTTAAGAAGCACGCGTTCCACTTCCACTG
CATCTCGCGATGGCTGAAAACCCGTCAAGTTTGTCCCCTCGACAATAGGG
ACTGGGAGTTCCAGAAGTACGGCCGGTAAGTATCGAGTGCCAAGCCAACC
AAGGTTCGTCTACGACTGAGGAGTGTACAGTCGCTTGGGGTATCTGCAAC
TGGAACGCGGTCGCCCTGTGGGCGTGGGATATCGTCGTCGACAACTGCGC
AATTTGCCGTAACCACATCATGGATCTCTATGGCGGATGTGGAAATGAAA
GAAGCCGGCTCCGCCGCCGTCAAAGCGAAGGGCTCATCGAAAGCTTCCGA
AGGTGCCAGTGACGGCAAGAAGAAGTTTGAGGTTAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265AT5 |
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR024766 |
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF12678 |
| DBxref | PFAM:PF12861 |
| Product | RING-box protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:928208..928760 - |
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