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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:939016..941554+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006944-T1 ID=KJC3_006944-T1|Name=KJC3_006944-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2539bp|location=Sequence derived from alignment at ch5:939016..941554+ (Aspergillus niger KJC3)
ATTGGAATGACAGCCAAGATTAAAAATAACCGATTTGTACGCCGCATCCG
GAGGAAGCGGCAGTTCCAGCCCAGGCGGGAAAGGGAACCTTTTTTTCATT
TCCCAAGTAATTTGCTTTTCCCCCTTCGCCTTCGTTCGCGATATTATTAT
TATTCTTCTTCCCTGTGGTCTTTCTTCCTGCCCCCGGCTTATCCTCAGCC
TCTTTCTCGACTTTCTCCTCGTGTCTCCCCCCTCTTTTTCCCCCCTCGTC
CTCCTCACATCCTCACTTCCCCCCGTTCTTTCAAAAGTGCCTGGCTGAGT
AGAACGTATCTCCGGGCTGGTGTTTCGTGTTCTTTTTTTATACTTGCGGG
TTTTCTTTCCTCTTGACGCTCGCTCCGGCGCCGCCACTATCACTTCATCC
CCGACTCGCCTTCGCCTTGCCACGACTCTTCCTCGTTCCCACAGGCCTAT
CGTTATCAATTATCCCCTTCGCATAGACACTCATTGAATCCAGTCACCAT
GGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAG
ACCAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGT
CCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTA
TTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCG
GCACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGGTATGTTGG
CTAAAATCGGAGCACATGATGGGCGTGTGTTGGATGTTCAAAGGCTGACC
GCTGTTCGATTTTGCCTGCAGTCTCTCGTTTGTATCATCGCTATCCAGAC
CTGTAAATCATGTGGTTTGATCACTTATCGCGACTTCAGCGCGGACGAGG
CCAGAAAGTGTAAGTGCTCTGCCTGCTCGTTAGATCCCCTCGCGCCCTCG
AACTGACGTGCCTTTGATTATCACTAGGGTTCCCCATCACTCTGCTCTTG
ATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCC
CGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAG
AGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTC
GGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCA
CGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATG
CAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTT
TTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACAG
TACGTTACTCAGACTAAAAACATTGTGGCTCAAAAGCATCCTTTACTGAC
CTGCTGTTCTCTAGCCATGTTCTACAACAACCTTCTGTCGATTCCCGTCC
TGATCGTTCTGTCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCAAC
CGCAACTTCCCTCCCATGGACCGCAACAGCATCGTTTTCGCCATGATCCT
CTCCGGCTTGTCGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTC
GCGTCACTTCTTCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGCTT
CCCATTGCTATCTCTGGACTTATTTTCTTCGATGCCCCTGTTACCTTCCC
CAGCGTTTCGGCTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCG
TTGCTAAGATCAAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACC
GCCAACCCCCCGGTCAGCGCCAGCAGCCAGAGTATGCGGGACTCGCTGCG
TTCCTAAATCGATTTGCCTAGAGATCAACGGGATGGTCGGGTCGTTGTGG
GCGACTGCTCCGGCTTGATCATTGTCGAGGTTTCTCCGTACCGAGTTCGA
GAATGTGCTCGTTACTCGCATGTGATATGTGATTCTTCGTTTCGTTGTAG
TTGGCGGGGGCTGTTCAAACCCTGAGTCACAGTCTTCATTCCTTTCTCGG
CAGGTGTTGGTGGTTCTGTATTCAATATCCACGTGCCGAGCTACCTGAAA
GGCCTCTATTTTGCTGTTGTTGGTCTTTCAGCTTTGCTTTCAAATATCTG
CCCCGATCATGACCCTTTTCGCATATTCTTTTTGTTTCCTTTATCGGGCT
GCGCAGATGGCTTCCATTTGAATATCGTCTAGTAATGCCGTGGATTGATA
TGACATGTCTCATTTGTTGCTGATCATGGCGTGTTCCGTGTTCTTGCCTG
TGGCGAGGCCTCGCAAAGTAAGGTTTCGTGCGGTTGAGGATTCATCAAAA
AGGAAGGCCTTTTCTGGTGTATAAGCCTGTATATAAGAAGTTTTTTCTTT
TTCTAGTGCCTTTTTAATAAACTTTATAGAATTGAAGCGTCTTTTTTTTG
GGATGACTGAAGATTACTCCGCGGCAGGAGCACTAGTCGTCGAGGTTGCG
CTCAAGAGTTCTTTCTAGATGATAAGAAGTCCCATGGAG back to topCoding sequence (CDS) from alignment at ch5:939016..941554+ >KJC3_006944-T1 ID=KJC3_006944-T1|Name=KJC3_006944-T1|organism=Aspergillus niger KJC3|type=CDS|length=4584bp|location=Sequence derived from alignment at ch5:939016..941554+ (Aspergillus niger KJC3)
ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGAT
AGACCAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGA
GTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC
TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTC
CGGCACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCG
TTTGTATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTAT
CGCGACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCT
CTTGATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGA
TTCCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTAC
GGAGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTC
TTTCGGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCA
AGCACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTG
AATGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTA
TGTTTTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTG
ACACCATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTG
TCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCC
TCCCATGGACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGT
CGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCT
TCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTAT
CTCTGGACTTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGG
CTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATC
AAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCC
GGTCAGCGCCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGG
CTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGAC
CAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCC
GCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATT
GTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGC
ACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTG
TATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCG
ACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTG
ATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCC
CGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAG
AGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTC
GGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCA
CGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATG
CAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTT
TTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACAC
CATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCG
CTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCC
ATGGACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTC
TGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGA
CCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCT
GGACTTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTAT
CGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGC
AAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTC
AGCGCCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGGCTGA
AGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGG
GCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCG
TCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATTGTGG
ATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTG
ACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTGTATC
ATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCGACTT
CAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCG
GCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTC
TACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAGAGGT
GCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGAT
TGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCACGCT
GTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATGCAGG
CTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGG
GCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACACCATG
TTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCGCTTT
CTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGG
ACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTCTGTG
TTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGACCAC
TTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGAC
TTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTATCGTC
GTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGCAAAA
CGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCG
CCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGGCTGAAGGC
AAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGGGCAA
CAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCGTCGG
GCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATTGTGGATCC
TCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTGACTT
CAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTGTATCATCG
CTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCGACTTCAGC
GCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCGGCAT
GATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTCTACA
CCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAGAGGTGCTG
TGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGATTGAT
GGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCACGCTGTCG
AGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATGCAGGCTAT
ATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGGGCAT
GCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACACCATGTTCT
ACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCGCTTTCTTG
GAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGGACCG
CAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTCTGTGTTTA
TTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGACCACTTAC
TCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGACTTAT
TTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTATCGTCGTTG
GCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGCAAAACGCT
AAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCGCCAG
CAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006944-T1.utr5p1 | KJC3_006944-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006944-T1.utr3p1 | KJC3_006944-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000620 |
| DBxref | PFAM:PF00892 |
| Product | GDP-mannose transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:939016..941554 + |
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