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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:970867..973061+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006959-T3 ID=KJC3_006959-T3|Name=KJC3_006959-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2195bp|location=Sequence derived from alignment at ch5:970867..973061+ (Aspergillus niger KJC3)
CGTGGTTGATTTAGGTGGGCCTACGATGGGTGCCTATTTAGCCAACTGTC
ACCTTTACCTACTTCTGGCCCTAGTCGGCTCCCAATCACCTCTTCTTTGT
TTGTGAGACGAAAATATCAGTCATAACTTACAAGAGCGTGAAGCTGTCTT
CATCTCATCTCGAGGTAATTCTTGGGGCGGATACAATACTGGTTGCCATG
GACCATAAAAATGATAGTGATCCAACATGTCCCTTTTGTCCATTTTCTGA
TCCGGGCATCAGCCGTGTTGTAGAACATGTGGATGTTTACCACCCTGAAG
TGGATACCCAGGCTGGGCATAGCAGACGGCCGGCAAATGCACCCTCAACT
GGAACGGGAGAATGTTCTGGGGATTATACCGAGTGTCCACACGGCTGTGG
GGAAATAGTACTCAACACCGAACTCTCCGCCCACCTCGACTTGCATTTTG
CGGAAACAGTTGCCCTTGATGAAATATCTTCATGCCAGCCGGAATTGCCT
GTTGACATGGAGAGTGCGGTGTCAAGCCATGATGCAGAGAGACAGGAATG
GTTGGAAGGGGGCACTCCCGGGCTGCTACCCAGCGAAGATAGAACGCTCT
CATCATGGTCATTGATTGGTGGCACGAAAACACCGCACAATGGGAGAGCT
AAGCGGCTTGGTGTACGAAAATCTTCATTTATCCTTTATCCATCATAGAG
CGCGTTGTGCTGACATACTACTTAGCGTACGGAGTTAGGGCCTCATGCTC
ACGAAAAGCAGATGCCATCGTGGCTGCGAAGAATGTTAGAGAGGGGTTCT
ATGTCAATTTTCACAAATACAATCGCCGTAGACGGCACGCTTCGGAGGCG
CGAAGCTGTCGAGAACGAGACGCGCGATGTCATTCCGGTGCTCGCTCGGT
TATGTGAGCAGGACAAATCCGTTCAACGTGCTTTTTTTTGCAGCCCAAAG
GTCCATCAGATCTCGAAGATCCCCAAAGAAGGAGGATTTTGCGGGTATAG
GAATATCCAAATGCTAATCACGTACATGAAAGAAACTCAACTTCCGGGGC
ATGAGCGTTTCCCACAAGAGCTACCCACGATCTTCCAACTACAAGATATG
ATCGAAGATGCGTGGGACAATGGTTTTAATAGTGTAGGGAGGGTCGAAAC
AGGAGGTATCCGAGGAACTAGGAAGTACATTGGCACGCCAGAGGTATGAT
GACCGTGAATGTAATCTTGTGGATTGAATTGATTCATTAATTTATAGGCA
CAAGCGCTGTTCTCGAGTCTCGGCATACAGTAAGACTCCATCTCCAAGCC
GGGAAGCGCTGCTTTAACAACCCACAGGTGCGAAGCAAATAGCATTGGTG
CCTCGAAGGAAGTGCGTGCACATGACGCACTATACATGAATGTTGCGGCT
TATTTTCGAGAATCATGTGCTTTAGAGGAAGGACACAAAGTCATGCAGAC
AAACTTGCCCCCTATTTACTTCCAGCATCAGGGTTTGAAGACCTCTTTCT
TCGTGACATGTAACATGTCTAATGAGTGGATGGGCATAAACAGGACACTC
CATGACAATTATCGGTTTCGAAATTCGTGACGGTGGTAGCGCAAACATAC
TAGTCTTCGATCCTATGTTCCGAACACCTCCAGCAGTGAAGCGGCTCAGA
GGGCCCCAGGCACTGACGTCGGACCCCGCACGCGTATTGAAGGTATACAG
ACGAGGCACAGCATATCTGCAAAAGTACAAGGTATTTGAGCTTCTAAAGT
AAGTTACATGGAAGAGGCGACCGATATGGTGACGATGCAGGGTTAGCTTA
CCAGACTACTCCTAGGCTTAAATATTCCGCCAATTCGTCTAGCAAATAGC
ACTGCGGACAAGCGCGGCATGGCATCAGGCTGCAAAACAGCAACAGTTCT
TTGGCCTACGATGTGAAGCGTGCATCACAACATGCCTAGTTTGCTATTTC
CCATCATCATCATCAGCATGGACATGAATCTTCAAGTAGCCGTTATCTGT
CAGCTCAACAAGTGGCAGCATGCTTGAGGAAGGTTATTAGGTTGGGTTTT
CAAGTGCATTGTACCACATCATAAGAACTCAAGCTTCCCGGCGAGCTCTC
TGCATATGCTTATCAGGGTTACATGTGAGCTAGCCTTGTCTAAGTACTCT
AATACTCGTTTGTGCATATATAATTCTGAGCACGGCAGCTTCAAT back to topCoding sequence (CDS) from alignment at ch5:970867..973061+ >KJC3_006959-T3 ID=KJC3_006959-T3|Name=KJC3_006959-T3|organism=Aspergillus niger KJC3|type=CDS|length=6408bp|location=Sequence derived from alignment at ch5:970867..973061+ (Aspergillus niger KJC3)
ATGGACCATAAAAATGATAGTGATCCAACATGTCCCTTTTGTCCATTTTC
TGATCCGGGCATCAGCCGTGTTGTAGAACATGTGGATGTTTACCACCCTG
AAGTGGATACCCAGGCTGGGCATAGCAGACGGCCGGCAAATGCACCCTCA
ACTGGAACGGGAGAATGTTCTGGGGATTATACCGAGTGTCCACACGGCTG
TGGGGAAATAGTACTCAACACCGAACTCTCCGCCCACCTCGACTTGCATT
TTGCGGAAACAGTTGCCCTTGATGAAATATCTTCATGCCAGCCGGAATTG
CCTGTTGACATGGAGAGTGCGGTGTCAAGCCATGATGCAGAGAGACAGGA
ATGGTTGGAAGGGGGCACTCCCGGGCTGCTACCCAGCGAAGATAGAACGC
TCTCATCATGGTCATTGATTGGTGGCACGAAAACACCGCACAATGGGAGA
GCTAAGCGGCTTGGTCGTACGGAGTTAGGGCCTCATGCTCACGAAAAGCA
GATGCCATCGTGGCTGCGAAGAATGTTAGAGAGGGGTTCTATGTCAATTT
TCACAAATACAATCGCCGTAGACGGCACGCTTCGGAGGCGCGAAGCTGTC
GAGAACGAGACGCGCGATGTCATTCCGGTGCTCGCTCGGTTATGTGAGCA
GGACAAATCCGTTCAACGTGCTTTTTTTTGCAGCCCAAAGGTCCATCAGA
TCTCGAAGATCCCCAAAGAAGGAGGATTTTGCGGGTATAGGAATATCCAA
ATGCTAATCACGTACATGAAAGAAACTCAACTTCCGGGGCATGAGCGTTT
CCCACAAGAGCTACCCACGATCTTCCAACTACAAGATATGATCGAAGATG
CGTGGGACAATGGTTTTAATAGTGTAGGGAGGGTCGAAACAGGAGGTATC
CGAGGAACTAGGAAGTACATTGGCACGCCAGAGGCACAAGCGCTGTTCTC
GAGTCTCGGCATACAGTGCGAAGCAAATAGCATTGGTGCCTCGAAGGAAA
GGAAGGACACAAAGTCATGCAGACAAACTTGCCCCCTATTTACTTCCAGC
ATCAGGGACACTCCATGAATGGACCATAAAAATGATAGTGATCCAACATG
TCCCTTTTGTCCATTTTCTGATCCGGGCATCAGCCGTGTTGTAGAACATG
TGGATGTTTACCACCCTGAAGTGGATACCCAGGCTGGGCATAGCAGACGG
CCGGCAAATGCACCCTCAACTGGAACGGGAGAATGTTCTGGGGATTATAC
CGAGTGTCCACACGGCTGTGGGGAAATAGTACTCAACACCGAACTCTCCG
CCCACCTCGACTTGCATTTTGCGGAAACAGTTGCCCTTGATGAAATATCT
TCATGCCAGCCGGAATTGCCTGTTGACATGGAGAGTGCGGTGTCAAGCCA
TGATGCAGAGAGACAGGAATGGTTGGAAGGGGGCACTCCCGGGCTGCTAC
CCAGCGAAGATAGAACGCTCTCATCATGGTCATTGATTGGTGGCACGAAA
ACACCGCACAATGGGAGAGCTAAGCGGCTTGGTCGTACGGAGTTAGGGCC
TCATGCTCACGAAAAGCAGATGCCATCGTGGCTGCGAAGAATGTTAGAGA
GGGGTTCTATGTCAATTTTCACAAATACAATCGCCGTAGACGGCACGCTT
CGGAGGCGCGAAGCTGTCGAGAACGAGACGCGCGATGTCATTCCGGTGCT
CGCTCGGTTATGTGAGCAGGACAAATCCGTTCAACGTGCTTTTTTTTGCA
GCCCAAAGGTCCATCAGATCTCGAAGATCCCCAAAGAAGGAGGATTTTGC
GGGTATAGGAATATCCAAATGCTAATCACGTACATGAAAGAAACTCAACT
TCCGGGGCATGAGCGTTTCCCACAAGAGCTACCCACGATCTTCCAACTAC
AAGATATGATCGAAGATGCGTGGGACAATGGTTTTAATAGTGTAGGGAGG
GTCGAAACAGGAGGTATCCGAGGAACTAGGAAGTACATTGGCACGCCAGA
GGCACAAGCGCTGTTCTCGAGTCTCGGCATACAGTGCGAAGCAAATAGCA
TTGGTGCCTCGAAGGAAAGGAAGGACACAAAGTCATGCAGACAAACTTGC
CCCCTATTTACTTCCAGCATCAGGGACACTCCATGAATGGACCATAAAAA
TGATAGTGATCCAACATGTCCCTTTTGTCCATTTTCTGATCCGGGCATCA
GCCGTGTTGTAGAACATGTGGATGTTTACCACCCTGAAGTGGATACCCAG
GCTGGGCATAGCAGACGGCCGGCAAATGCACCCTCAACTGGAACGGGAGA
ATGTTCTGGGGATTATACCGAGTGTCCACACGGCTGTGGGGAAATAGTAC
TCAACACCGAACTCTCCGCCCACCTCGACTTGCATTTTGCGGAAACAGTT
GCCCTTGATGAAATATCTTCATGCCAGCCGGAATTGCCTGTTGACATGGA
GAGTGCGGTGTCAAGCCATGATGCAGAGAGACAGGAATGGTTGGAAGGGG
GCACTCCCGGGCTGCTACCCAGCGAAGATAGAACGCTCTCATCATGGTCA
TTGATTGGTGGCACGAAAACACCGCACAATGGGAGAGCTAAGCGGCTTGG
TCGTACGGAGTTAGGGCCTCATGCTCACGAAAAGCAGATGCCATCGTGGC
TGCGAAGAATGTTAGAGAGGGGTTCTATGTCAATTTTCACAAATACAATC
GCCGTAGACGGCACGCTTCGGAGGCGCGAAGCTGTCGAGAACGAGACGCG
CGATGTCATTCCGGTGCTCGCTCGGTTATGTGAGCAGGACAAATCCGTTC
AACGTGCTTTTTTTTGCAGCCCAAAGGTCCATCAGATCTCGAAGATCCCC
AAAGAAGGAGGATTTTGCGGGTATAGGAATATCCAAATGCTAATCACGTA
CATGAAAGAAACTCAACTTCCGGGGCATGAGCGTTTCCCACAAGAGCTAC
CCACGATCTTCCAACTACAAGATATGATCGAAGATGCGTGGGACAATGGT
TTTAATAGTGTAGGGAGGGTCGAAACAGGAGGTATCCGAGGAACTAGGAA
GTACATTGGCACGCCAGAGGCACAAGCGCTGTTCTCGAGTCTCGGCATAC
AGTGCGAAGCAAATAGCATTGGTGCCTCGAAGGAAAGGAAGGACACAAAG
TCATGCAGACAAACTTGCCCCCTATTTACTTCCAGCATCAGGGACACTCC
ATGAATGGACCATAAAAATGATAGTGATCCAACATGTCCCTTTTGTCCAT
TTTCTGATCCGGGCATCAGCCGTGTTGTAGAACATGTGGATGTTTACCAC
CCTGAAGTGGATACCCAGGCTGGGCATAGCAGACGGCCGGCAAATGCACC
CTCAACTGGAACGGGAGAATGTTCTGGGGATTATACCGAGTGTCCACACG
GCTGTGGGGAAATAGTACTCAACACCGAACTCTCCGCCCACCTCGACTTG
CATTTTGCGGAAACAGTTGCCCTTGATGAAATATCTTCATGCCAGCCGGA
ATTGCCTGTTGACATGGAGAGTGCGGTGTCAAGCCATGATGCAGAGAGAC
AGGAATGGTTGGAAGGGGGCACTCCCGGGCTGCTACCCAGCGAAGATAGA
ACGCTCTCATCATGGTCATTGATTGGTGGCACGAAAACACCGCACAATGG
GAGAGCTAAGCGGCTTGGTCGTACGGAGTTAGGGCCTCATGCTCACGAAA
AGCAGATGCCATCGTGGCTGCGAAGAATGTTAGAGAGGGGTTCTATGTCA
ATTTTCACAAATACAATCGCCGTAGACGGCACGCTTCGGAGGCGCGAAGC
TGTCGAGAACGAGACGCGCGATGTCATTCCGGTGCTCGCTCGGTTATGTG
AGCAGGACAAATCCGTTCAACGTGCTTTTTTTTGCAGCCCAAAGGTCCAT
CAGATCTCGAAGATCCCCAAAGAAGGAGGATTTTGCGGGTATAGGAATAT
CCAAATGCTAATCACGTACATGAAAGAAACTCAACTTCCGGGGCATGAGC
GTTTCCCACAAGAGCTACCCACGATCTTCCAACTACAAGATATGATCGAA
GATGCGTGGGACAATGGTTTTAATAGTGTAGGGAGGGTCGAAACAGGAGG
TATCCGAGGAACTAGGAAGTACATTGGCACGCCAGAGGCACAAGCGCTGT
TCTCGAGTCTCGGCATACAGTGCGAAGCAAATAGCATTGGTGCCTCGAAG
GAAAGGAAGGACACAAAGTCATGCAGACAAACTTGCCCCCTATTTACTTC
CAGCATCAGGGACACTCCATGAATGGACCATAAAAATGATAGTGATCCAA
CATGTCCCTTTTGTCCATTTTCTGATCCGGGCATCAGCCGTGTTGTAGAA
CATGTGGATGTTTACCACCCTGAAGTGGATACCCAGGCTGGGCATAGCAG
ACGGCCGGCAAATGCACCCTCAACTGGAACGGGAGAATGTTCTGGGGATT
ATACCGAGTGTCCACACGGCTGTGGGGAAATAGTACTCAACACCGAACTC
TCCGCCCACCTCGACTTGCATTTTGCGGAAACAGTTGCCCTTGATGAAAT
ATCTTCATGCCAGCCGGAATTGCCTGTTGACATGGAGAGTGCGGTGTCAA
GCCATGATGCAGAGAGACAGGAATGGTTGGAAGGGGGCACTCCCGGGCTG
CTACCCAGCGAAGATAGAACGCTCTCATCATGGTCATTGATTGGTGGCAC
GAAAACACCGCACAATGGGAGAGCTAAGCGGCTTGGTCGTACGGAGTTAG
GGCCTCATGCTCACGAAAAGCAGATGCCATCGTGGCTGCGAAGAATGTTA
GAGAGGGGTTCTATGTCAATTTTCACAAATACAATCGCCGTAGACGGCAC
GCTTCGGAGGCGCGAAGCTGTCGAGAACGAGACGCGCGATGTCATTCCGG
TGCTCGCTCGGTTATGTGAGCAGGACAAATCCGTTCAACGTGCTTTTTTT
TGCAGCCCAAAGGTCCATCAGATCTCGAAGATCCCCAAAGAAGGAGGATT
TTGCGGGTATAGGAATATCCAAATGCTAATCACGTACATGAAAGAAACTC
AACTTCCGGGGCATGAGCGTTTCCCACAAGAGCTACCCACGATCTTCCAA
CTACAAGATATGATCGAAGATGCGTGGGACAATGGTTTTAATAGTGTAGG
GAGGGTCGAAACAGGAGGTATCCGAGGAACTAGGAAGTACATTGGCACGC
CAGAGGCACAAGCGCTGTTCTCGAGTCTCGGCATACAGTGCGAAGCAAAT
AGCATTGGTGCCTCGAAGGAAAGGAAGGACACAAAGTCATGCAGACAAAC
TTGCCCCCTATTTACTTCCAGCATCAGGGACACTCCATGAATGGACCATA
AAAATGATAGTGATCCAACATGTCCCTTTTGTCCATTTTCTGATCCGGGC
ATCAGCCGTGTTGTAGAACATGTGGATGTTTACCACCCTGAAGTGGATAC
CCAGGCTGGGCATAGCAGACGGCCGGCAAATGCACCCTCAACTGGAACGG
GAGAATGTTCTGGGGATTATACCGAGTGTCCACACGGCTGTGGGGAAATA
GTACTCAACACCGAACTCTCCGCCCACCTCGACTTGCATTTTGCGGAAAC
AGTTGCCCTTGATGAAATATCTTCATGCCAGCCGGAATTGCCTGTTGACA
TGGAGAGTGCGGTGTCAAGCCATGATGCAGAGAGACAGGAATGGTTGGAA
GGGGGCACTCCCGGGCTGCTACCCAGCGAAGATAGAACGCTCTCATCATG
GTCATTGATTGGTGGCACGAAAACACCGCACAATGGGAGAGCTAAGCGGC
TTGGTCGTACGGAGTTAGGGCCTCATGCTCACGAAAAGCAGATGCCATCG
TGGCTGCGAAGAATGTTAGAGAGGGGTTCTATGTCAATTTTCACAAATAC
AATCGCCGTAGACGGCACGCTTCGGAGGCGCGAAGCTGTCGAGAACGAGA
CGCGCGATGTCATTCCGGTGCTCGCTCGGTTATGTGAGCAGGACAAATCC
GTTCAACGTGCTTTTTTTTGCAGCCCAAAGGTCCATCAGATCTCGAAGAT
CCCCAAAGAAGGAGGATTTTGCGGGTATAGGAATATCCAAATGCTAATCA
CGTACATGAAAGAAACTCAACTTCCGGGGCATGAGCGTTTCCCACAAGAG
CTACCCACGATCTTCCAACTACAAGATATGATCGAAGATGCGTGGGACAA
TGGTTTTAATAGTGTAGGGAGGGTCGAAACAGGAGGTATCCGAGGAACTA
GGAAGTACATTGGCACGCCAGAGGCACAAGCGCTGTTCTCGAGTCTCGGC
ATACAGTGCGAAGCAAATAGCATTGGTGCCTCGAAGGAAAGGAAGGACAC
AAAGTCATGCAGACAAACTTGCCCCCTATTTACTTCCAGCATCAGGGACA
CTCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006959-T3.utr5p1 | KJC3_006959-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER1108685 |
| DBxref | InterPro:IPR012462 |
| DBxref | PFAM:PF07910 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:970867..973061 + |
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