You are here

Home

KJC3_006960-T1, KJC3_006960-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006960-T1
Unique NameKJC3_006960-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:973193..974563+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006960-T1 ID=KJC3_006960-T1|Name=KJC3_006960-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1371bp|location=Sequence derived from alignment at ch5:973193..974563+ (Aspergillus niger KJC3)
CGGGCATATTGAAAGATATAATTCACTTCACGCATTTCAATGAGGCATAA
TGCGGACATCTCCGAATGTGATAATAACAGGCACGCCCGGCGTAGGCAAA
ACCGTCCATTGCGAACAATTGGCCGAGGAGACAGGTCTGCGGCATCTTTC
AATCAACCATGTCGCAAAAGAGCGAGACTGCTACGAGACATATGACCACG
AATTACAAACCTGGGTCGTGGATGAGGACAAAGTACGTTCATGTAACTCT
TATTTAGTCTGGTTTTCAGTCGCCTGATAAGTTGGTTTCAATCATGCACT
CCTTACGTTTACCTAACATACATATATTGCAGCTCCTGGACGCTATTGAG
GATCAGGTGCTTCAGGGTGGCTATCTAATCGACTGGCATGCATGCGACCT
GTTCCCCAAGTCATGGATCGATTTGGTCGTTGTATTACGCTGCCCATCTA
CGGCTGTTCATTATGATCGTCTCGCATCAAGGTACACCACAGGACCATAA
GCCACAACCCCCTTTACTATCAGCTGAAATCCTAATTGGAGCTTATTGTT
GCAGGGGCTACAATGAAACGAAGCTGCAGGAAAATTTAGATGCCGAGATA
TTTGGTGTTTTGCTTGACGAAGCTCGAGAAGCCTTCGACGAGGAATTAGT
GGTTGAATTGAATAGTGAGAGGGATGAGGATGTAGAGTCCAATTGCGCAA
GGATTTCTAGCTGGGTACAATCTTGGAAACATGATCGAGCTTGAGGTCTC
GATTATCCCAAGGGATACGGGGAGGGGGCGGCCGAAACCGACACCAATTC
GTATCGTGAAATTTGCAGGTCATATCAAGGACGTCTGTCGGCCAACCAAT
CTTGCAATTTGACCAGAGCTTTATATCTGTGTGAGATACGGTTCTGCTCC
AATATTAGTGGCTGATCAAGAAACTGATGGGACAATTTCCTGACCTTCTC
TTCTTTGTCCATTTCAGCGTAAGTCTTGCCTTGATGCTCAAAAATCGGGT
CCCAGCCTGGAAGGAGCTAGTGAGCCTCAATTTGTGTAACTAATAGTCGC
CTGTACATACCAAAATTCGCAGGGCCCCTTGGTCTCACGATAGCTCCCTT
GTGTGAATGCGTCAGCCTCTGACAGGGTAGGTGGAGTTGACACTCAATCC
TACCTCAGTTCTACCCTGGAATAAGATTGGATCCGAACCGGGTCCGCTGG
AAAAGGCAAAGGTGCAGACAGCCTCCGCAGCCCTGGTCTCAAATGAGTCA
AGCAATTTATTCAGACCTTCATGGCCTAGGGCATCGAGAAATGATTTGCT
AGATAGGATTAGTAGGAGAGTCAGTATGCTTGGACGAGAAATACATACAT
ATATGGACCAGGCAGTCCTTT
back to top

Coding sequence (CDS) from alignment at ch5:973193..974563+

>KJC3_006960-T1 ID=KJC3_006960-T1|Name=KJC3_006960-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch5:973193..974563+ (Aspergillus niger KJC3)
ATGCGGACATCTCCGAATGTGATAATAACAGGCACGCCCGGCGTAGGCAA
AACCGTCCATTGCGAACAATTGGCCGAGGAGACAGGTCTGCGGCATCTTT
CAATCAACCATGTCGCAAAAGAGCGAGACTGCTACGAGACATATGACCAC
GAATTACAAACCTGGGTCGTGGATGAGGACAAACTCCTGGACGCTATTGA
GGATCAGGTGCTTCAGGGTGGCTATCTAATCGACTGGCATGCATGCGACC
TGTTCCCCAAGTCATGGATCGATTTGGTCGTTGTATTACGCTGCCCATCT
ACGGCTGTTCATTATGATCGTCTCGCATCAAGGGGCTACAATGAAACGAA
GCTGCAGGAAAATTTAGATGCCGAGATATTTGGTGTTTTGCTTGACGAAG
CTCGAGAAGCCTTCGACGAGGAATTAGTGGTTGAATTGAATAGTGAGAGG
GATGAGGATGTAGAGTCCAATTGCGCAAGGATTTCTAGCTGGGTACAATC
TTGGAAACATGATCGAGCTTGAATGCGGACATCTCCGAATGTGATAATAA
CAGGCACGCCCGGCGTAGGCAAAACCGTCCATTGCGAACAATTGGCCGAG
GAGACAGGTCTGCGGCATCTTTCAATCAACCATGTCGCAAAAGAGCGAGA
CTGCTACGAGACATATGACCACGAATTACAAACCTGGGTCGTGGATGAGG
ACAAACTCCTGGACGCTATTGAGGATCAGGTGCTTCAGGGTGGCTATCTA
ATCGACTGGCATGCATGCGACCTGTTCCCCAAGTCATGGATCGATTTGGT
CGTTGTATTACGCTGCCCATCTACGGCTGTTCATTATGATCGTCTCGCAT
CAAGGGGCTACAATGAAACGAAGCTGCAGGAAAATTTAGATGCCGAGATA
TTTGGTGTTTTGCTTGACGAAGCTCGAGAAGCCTTCGACGAGGAATTAGT
GGTTGAATTGAATAGTGAGAGGGATGAGGATGTAGAGTCCAATTGCGCAA
GGATTTCTAGCTGGGTACAATCTTGGAAACATGATCGAGCTTGAATGCGG
ACATCTCCGAATGTGATAATAACAGGCACGCCCGGCGTAGGCAAAACCGT
CCATTGCGAACAATTGGCCGAGGAGACAGGTCTGCGGCATCTTTCAATCA
ACCATGTCGCAAAAGAGCGAGACTGCTACGAGACATATGACCACGAATTA
CAAACCTGGGTCGTGGATGAGGACAAACTCCTGGACGCTATTGAGGATCA
GGTGCTTCAGGGTGGCTATCTAATCGACTGGCATGCATGCGACCTGTTCC
CCAAGTCATGGATCGATTTGGTCGTTGTATTACGCTGCCCATCTACGGCT
GTTCATTATGATCGTCTCGCATCAAGGGGCTACAATGAAACGAAGCTGCA
GGAAAATTTAGATGCCGAGATATTTGGTGTTTTGCTTGACGAAGCTCGAG
AAGCCTTCGACGAGGAATTAGTGGTTGAATTGAATAGTGAGAGGGATGAG
GATGTAGAGTCCAATTGCGCAAGGATTTCTAGCTGGGTACAATCTTGGAA
ACATGATCGAGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004017adenylate kinase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006960KJC3_006960Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006960-T1KJC3_006960-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006960-T1.utr5p1KJC3_006960-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006960-T1.exon1KJC3_006960-T1.exon1Aspergillus niger KJC3exon
KJC3_006960-T1.exon2KJC3_006960-T1.exon2Aspergillus niger KJC3exon
KJC3_006960-T1.exon3KJC3_006960-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006960-T1.cdsKJC3_006960-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006960-T1.utr3p1KJC3_006960-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264XPY
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020618
DBxrefPFAM:PF13238
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:973193..974563 +
Powered by Drupal