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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:995182..997341- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006968-T2 ID=KJC3_006968-T2|Name=KJC3_006968-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2160bp|location=Sequence derived from alignment at ch5:995182..997341- (Aspergillus niger KJC3)
GTTCTCTAGCCCCTCCTTTCCAACTTATTACAAGCTGTCCTCCCCGCCAA
CTGTCGCCGCTATTTTGTCCCCTCTACTTGGATGTTGAGACACTAAATTT
TTGTACTGTACAAGGATAATTCGTTCAACATGCTTGATCTGGCAGACTTC
ATCAGTGATCGCGGTGGCGATCCGAACAAAATCAAAGAGAGCCAACGGAA
ACGCTACGCCCCAGAAAGTGTCGTTGATGAGGTCCTCTCCCTATACGAAG
AGGCGCGGCGTGGTATGTTATTTGCTTTTTCACAGATATTTCACATTTTA
AACGGCTGATCTGTGATATCCTATAGCACGGTATGAGGTTATGCAGATTA
ACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGTT
CGCATTTATTTTACATATATACCAAATTCTACTGTGATTTAATTTAACTA
TTTTATCCCTTATTGCGGTGGCAAAAAACTGACATATAATTCTGAAAAAG
AATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAA
AAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAG
ACAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTG
AGCAACAATGAAGTACGTATTGTACTCGGTCTGAGACGAGAGACTCATCT
AACCGAAAGGACTACTGTTAGGACGACAACGCCGTAATAAGGAAGTGGGC
GCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGG
TTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTT
GGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGC
GCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTA
ACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAG
CTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAA
GTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCT
TGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAGTTGGTG
GTCCCAGCATGTCCAGTCAACTTCTCTTTTAGGCTAACCAGCACACAGGT
ACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAG
GATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGTGATACGCCC
TGGGCTACCCATGTTGCTTGTCATGCTAACTCAGCCCAGATCGAACAATT
TGTCCTCACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGG
CCACTTCGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTC
GCTATTGTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCT
CGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCT
CCAACTGTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACG
AAGAAGGCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGAC
TTTGTGTGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGA
CTGATGATGTACGTCATGACTCTGACCCACATGCTGCTGGTGATGATACT
GATAATGTTTTAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCC
CGGGCGCTCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGT
ACTTCCAACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGC
AGATGAGACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAAATCTAGCAG
TTAAGTTTTAGTTTAGACGAGATCAATTAGCGGGTCATTGGCTGTTATAT
GAGCATCTCGATTAACCAAGCACAAAAAGATGAAAGCTGTAGAAGCGAGA
TCCTAGTGACCTGGGTCTAAAGACCATTGTTATTGCAGTTATAAGCCATG
GCAATTGATTGATATGGAGTGCAAGGAGCTAATCTATGAATTTATCGTTT
GGCCTATCGC back to topCoding sequence (CDS) from alignment at ch5:995182..997341- >KJC3_006968-T2 ID=KJC3_006968-T2|Name=KJC3_006968-T2|organism=Aspergillus niger KJC3|type=CDS|length=7668bp|location=Sequence derived from alignment at ch5:995182..997341- (Aspergillus niger KJC3)
GGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGA
ATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTACTTCCAACAAAA
ACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCAGATGAGACTGCG
AAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATTTGTCCTCACGAA
ACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGGCCACTTCGGAAG
AATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTCGCTATTGTTTCG
GGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCTCGAGGCGTGGTT
CCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCTCCAACTGTACCG
ATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACGAAGAAGGCTACT
GATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGACTTTGTGTGCAAC
CGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGACTGATGATGTAC
GCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGA
TGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGACGACAACGCCG
TAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGCAACTGT
CTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTTCGATTCAGAGCG
TGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGACAGGTTATGGGC
TTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAATTCCTCTGGGGT
AAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCTCAAGGACATGAT
GGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGCTCTACAAAGTCA
CGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATTGCTACTTCAGAG
CAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCAAGATAAAGATCT
CCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAA
CCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAA
AGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCT
GTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCAGCTCAATGCCCT
TCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTGTGCCGGAGCCTT
TGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCATACTCTAAAGAG
CTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAAGCAGACTACAAA
GGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGGAAGGCCTTCAGG
TTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGACTCGTGGCAAGCT
TTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCGGTCTCTTGGCCT
ACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGAACAATGCCGCAT
CGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAG
GAATTAGTATCCTGCTCCAACTGTACCGATTATCAATCCAGAGCCCTAGA
GATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGAAGTCCTACGTTC
ATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACACTCTGCTGTGTG
CTTGAGAACTACCAGACTGATGATGTACGCTGGATATAGCACTTGCTACC
GGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGCATCTTTCGTGTC
CATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAAGTGGGCGCCCGA
CAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGGTTCTCA
CTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTTGGCCAC
CGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGCGCTCAT
CAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTAACCAAC
CCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAGCTTGAA
CAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAAGTCCAC
CGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCTTGCATG
ACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAAATAAGGAAGACG
CGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAAAGCAAGAAGGAC
GCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGACAGCAAAATTCG
GACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGAGCAACAATGAAA
TGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGA
AAGAAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGC
TCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTACTTCCA
ACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCAGATGAG
ACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATTTGTCCT
CACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGGCCACTT
CGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTCGCTATT
GTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCTCGAGGC
GTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCTCCAACT
GTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACGAAGAAG
GCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGACTTTGTG
TGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGACTGATG
ATGTACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGG
TAAGGATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGACGACA
ACGCCGTAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGC
AACTGTCTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTTCGATTC
AGAGCGTGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGACAGGTT
ATGGGCTTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAATTCCTC
TGGGGTAAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCTCAAGGA
CATGATGGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGCTCTACA
AAGTCACGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATTGCTACT
TCAGAGCAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCAAGATAA
AGATCTCCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGAACAGAA
AGCCAACCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAA
AGGAAAAGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATTGTTCAT
GATTCTGTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCAGCTCAA
TGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTGTGCCGG
AGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCATACTCT
AAAGAGCTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAAGCAGAC
TACAAAGGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGGAAGGCC
TTCAGGTTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGACTCGTGG
CAAGCTTTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCGGTCTCT
TGGCCTACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGAACAATG
CCGCATCGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAAGGAGAG
TATAAGGAATTAGTATCCTGCTCCAACTGTACCGATTATCAATCCAGAGC
CCTAGAGATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGAAGTCCT
ACGTTCATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACACTCTGC
TGTGTGCTTGAGAACTACCAGACTGATGATGTACGCTGGATATAGCACTT
GCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGCATCTTT
CGTGTCCATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAAGTGGGC
GCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGG
TTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTT
GGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGC
GCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTA
ACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAG
CTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAA
GTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCT
TGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAAATAAGG
AAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAAAGCAAG
AAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGACAGCAA
AATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGAGCAACA
ATGAAATGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGC
AAGAGAAAGAAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCC
GGGCGCTCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTA
CTTCCAACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCA
GATGAGACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATT
TGTCCTCACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGG
CCACTTCGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTC
GCTATTGTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCT
CGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCT
CCAACTGTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACG
AAGAAGGCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGAC
TTTGTGTGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGA
CTGATGATGTACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGC
TCATGGTAAGGATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGG
ACGACAACGCCGTAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAG
AAGCGCAACTGTCTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTT
CGATTCAGAGCGTGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGA
CAGGTTATGGGCTTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAA
TTCCTCTGGGGTAAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCT
CAAGGACATGATGGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGC
TCTACAAAGTCACGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATT
GCTACTTCAGAGCAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCA
AGATAAAGATCTCCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGA
ACAGAAAGCCAACCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTA
TCCAAAAGGAAAAGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATT
GTTCATGATTCTGTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCA
GCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTG
TGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCA
TACTCTAAAGAGCTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAA
GCAGACTACAAAGGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGG
AAGGCCTTCAGGTTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGAC
TCGTGGCAAGCTTTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCG
GTCTCTTGGCCTACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGA
ACAATGCCGCATCGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAA
GGAGAGTATAAGGAATTAGTATCCTGCTCCAACTGTACCGATTATCAATC
CAGAGCCCTAGAGATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGA
AGTCCTACGTTCATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACA
CTCTGCTGTGTGCTTGAGAACTACCAGACTGATGATGTACGCTGGATATA
GCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGC
ATCTTTCGTGTCCATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAA
GTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACC
ATGAGGTTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAA
GTGGTTGGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAA
TCTCGCGCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACA
AGCCTAACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACC
GCCCAGCTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGA
AGACAAGTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTT
CAGCCTTGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAA
ATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAA
AGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGA
CAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGA
GCAACAATGAAATGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAG
ATTGGCAAGAGAAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006418 | tRNA aminoacylation for protein translation |
| GO:0006434 | seryl-tRNA aminoacylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004812 | aminoacyl-tRNA ligase activity |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
| GO:0004828 | serine-tRNA ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006968-T2.utr3p1 | KJC3_006968-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006968-T2.utr5p1 | KJC3_006968-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010978 |
| DBxref | InterPro:IPR033729 |
| DBxref | InterPro:IPR006195 |
| DBxref | InterPro:IPR002314 |
| DBxref | InterPro:IPR042103 |
| DBxref | InterPro:IPR002317 |
| DBxref | PFAM:PF00587 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:995182..997341 - |
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