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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1004306..1005198- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006972-T1 ID=KJC3_006972-T1|Name=KJC3_006972-T1|organism=Aspergillus niger KJC3|type=mRNA|length=893bp|location=Sequence derived from alignment at ch5:1004306..1005198- (Aspergillus niger KJC3)
ATTTCCATCACTTTATGCCACCAAATAGTGTTCTTGGAGTCTCCGGGAGT
GCATGTAGTGGACTATTAGGCTATACCTGTCTAACTCCCCCGGAGATCTC
TAGTCTTCCACTGAAGCATTCAGAAGCACATTCAGATAAAATCGGTCCGG
TCACTTGCTCGCACTGCCTTGTTCCACTAGACTTGTGTCTTCACAACATA
AATACGCGGTCGAGTTTGCAGCAGTTTCGTGCATTGCTCTGCTGATCTCA
CACCGGCTATTGGGCTGTCAATCCAAGGGCTTCAGATTTCCTGCAGTATC
AAAAGTCAGCTATAATTGCCGGTCGCGTCACCCAGAAACTTTGAAGCATG
GTATGCCACTCTACACAGCGCCAATGTACCTTTCTCTAAGCTTTCCTTGA
ATTTAGGGTAAGCGGAAGAAGTCCAGCAGGCAACCACAGCAACCCAGAAA
GGTGACCACCTTCTGATTCTTCAGGGTTACCGTCGCTAATACTCAACTAG
AGAGAACCGTTGCCTACGACATTTGCCTGCCTTTTCTGCAATCACGAGAA
CTCCATCGTCGTAAAACTAGACAAGAAACTTGGCCTAGGAAATTTGTCCT
GCAAAGTCTGTGGCCAGCGATTTCAGACGGGCATAAACTGTGCGTTCATG
TTTATGATTTCTCCTAAGTGAGTGGCATTTGCTCATGATATATACATAGA
TCTCTCCGCTGCTGTTGATGTATACTCGGATTGGGTGGATGCCTGTGACG
CGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGTGTC
CGACGTTCGAATGATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGTT
TGAGGAAGCGGATCGGAACGATACATATGCCGATGAATACTGA back to topCoding sequence (CDS) from alignment at ch5:1004306..1005198- >KJC3_006972-T1 ID=KJC3_006972-T1|Name=KJC3_006972-T1|organism=Aspergillus niger KJC3|type=CDS|length=1524bp|location=Sequence derived from alignment at ch5:1004306..1005198- (Aspergillus niger KJC3)
ATCTCTCCGCTGCTGTTGATGTATACTCGGATTGGGTGGATGCCTGTGAC
GCGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGTGT
CCGACGTTCGAATGATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGT
TTGAGGAAGCGGATCGGAACGATACATATGCCGATGAATACTGAAGAGAA
CCGTTGCCTACGACATTTGCCTGCCTTTTCTGCAATCACGAGAACTCCAT
CGTCGTAAAACTAGACAAGAAACTTGGCCTAGGAAATTTGTCCTGCAAAG
TCTGTGGCCAGCGATTTCAGACGGGCATAAACTGGTAAGCGGAAGAAGTC
CAGCAGGCAACCACAGCAACCCAGAAAGATGATCTCTCCGCTGCTGTTGA
TGTATACTCGGATTGGGTGGATGCCTGTGACGCGGTTGCCAAGGATACTG
CTACCAAGTACGAGGATAGTGATCCTCGTGTCCGACGTTCGAATGATTTT
GCTACCTCTCCCAGCGCTCGAGATGTTGGGTTTGAGGAAGCGGATCGGAA
CGATACATATGCCGATGAATACTGAAGAGAACCGTTGCCTACGACATTTG
CCTGCCTTTTCTGCAATCACGAGAACTCCATCGTCGTAAAACTAGACAAG
AAACTTGGCCTAGGAAATTTGTCCTGCAAAGTCTGTGGCCAGCGATTTCA
GACGGGCATAAACTGGTAAGCGGAAGAAGTCCAGCAGGCAACCACAGCAA
CCCAGAAAGATGATCTCTCCGCTGCTGTTGATGTATACTCGGATTGGGTG
GATGCCTGTGACGCGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAG
TGATCCTCGTGTCCGACGTTCGAATGATTTTGCTACCTCTCCCAGCGCTC
GAGATGTTGGGTTTGAGGAAGCGGATCGGAACGATACATATGCCGATGAA
TACTGAAGAGAACCGTTGCCTACGACATTTGCCTGCCTTTTCTGCAATCA
CGAGAACTCCATCGTCGTAAAACTAGACAAGAAACTTGGCCTAGGAAATT
TGTCCTGCAAAGTCTGTGGCCAGCGATTTCAGACGGGCATAAACTGGTAA
GCGGAAGAAGTCCAGCAGGCAACCACAGCAACCCAGAAAGATGATCTCTC
CGCTGCTGTTGATGTATACTCGGATTGGGTGGATGCCTGTGACGCGGTTG
CCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGTGTCCGACGT
TCGAATGATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGTTTGAGGA
AGCGGATCGGAACGATACATATGCCGATGAATACTGAAGAGAACCGTTGC
CTACGACATTTGCCTGCCTTTTCTGCAATCACGAGAACTCCATCGTCGTA
AAACTAGACAAGAAACTTGGCCTAGGAAATTTGTCCTGCAAAGTCTGTGG
CCAGCGATTTCAGACGGGCATAAACTGGTAAGCGGAAGAAGTCCAGCAGG
CAACCACAGCAACCCAGAAAGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006972-T1.utr5p1 | KJC3_006972-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265KPR |
| DBxref | InterPro:IPR038567 |
| DBxref | InterPro:IPR007808 |
| DBxref | PFAM:PF05129 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1004306..1005198 - |
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