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KJC3_006995-T1, KJC3_006995-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006995-T1
Unique NameKJC3_006995-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1145903..1147722-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006995-T1 ID=KJC3_006995-T1|Name=KJC3_006995-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1820bp|location=Sequence derived from alignment at ch5:1145903..1147722- (Aspergillus niger KJC3)
ATGGAGGGCTTTGATACCATGGCTATGCCTTACCTGGCCAGCCCGTTATC
GCTGGGCAATATACAGAGCACCGATTACCTCAATTCAATGTCCGGCATGG
ACCTACCTGAACAACGTTCTAATTTCGACTCTGAAACATTCGTGAGGTGA
GTTGTCGCTGACATCTCTCCCTCTATAGATCTCGTCTGACATACAATCCC
GCTAGTGGGGACGACATCGCATTTTCTCAACATGCGTTACCTCCCGCATC
GTTGAAGAGATTTCCCTCTGGTTATGAGGATCCATTCACAGACATGGTCG
CACCGTTCGAACCTGCGCCGCCCGAGCAACCTCCTGATTCTATAGATCAT
AACAATAAACTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCACTCTATT
AGATTACTCTCTACGCCGCACCTCAATATCGCTCTCTGCTCAGCTGCACG
GCATGTTTTTTCTTGCAGAATCGCCTTGGACTACATCTCCTACCGAGAAT
GCCCCGCCTCAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAACCTATT
TCAGATAACAGGGTCTGTTACCCTCCCACGGAGCTTACGCTACATAATGA
CGGAGCAAGGCGATCGGATCCCTATCCTGGCTCAAGAACTCACTGTGTCT
GCTACTGAGTCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGTCCCTTG
GAAGACTCCCGCCACTAATGTGAATCCCTCGGCTGAAGATGGGAACAATA
ATTCTAGCGGGAACGGTGGTAACCCTAATAGCAACAATCCTACTATTAAG
GTTGAAAAGGAGCCACCTCCGATTCCACTAGATATCATGGCTGGACAAGA
CCTTGATACTGACTACGCCACCTTCCCCATTGCCTGGAAACGACTCCAAT
TCCGCGTTGCTACTGCGAATAATGGACGCAGAAAGGAGCTTCAGCAGCAC
TTTGTTATTCGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGCCAAGAT
ACCAGTCTGCGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGCGGAGTC
CACGCAACTTTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGTGCTGCG
GCGTCGCGGAAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAACCGAAC
CACAACCGGCGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGAGCAGTT
CCCCAGAGACGTCTACCTCACAAGGTGGTGTAGTTGGACAACAAGCTTCA
CCGGATTGGGCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCCCTCGAC
GACTTTGCCTCACTCGACAGTATATACTCAGTCTAGCCCGGAGTTCTCGC
GGCCAACAGAAGCCCAACGACATCCAGCTGCCGCCCCCATCAATCTATCT
CTCCTCGAAGATGATGATGGTAATGATTCGGCTAACCCGGCTGATCCGGC
CAGGCCGGCGGCCTCATATACAAACGATATGTCTCACAAGCTTATGAACA
TGGATAATTCTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCTCATGGC
TTGCCCGAAACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACTGAATAC
TGCCAATATGCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAAATGAGA
GTGCCGACTTATTATATGAGTATTTTCCCTTGGGCTTGGATGATTGGCAA
GCACCCGTCGATGCAGTATATCGACCACATGTAGTGCATCACACAAACTT
ACCTGAAGTGAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGTATTTCG
CCGCAGAAGATGTTTTTTGA
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Coding sequence (CDS) from alignment at ch5:1145903..1147722-

>KJC3_006995-T1 ID=KJC3_006995-T1|Name=KJC3_006995-T1|organism=Aspergillus niger KJC3|type=CDS|length=3522bp|location=Sequence derived from alignment at ch5:1145903..1147722- (Aspergillus niger KJC3)
TGGGGACGACATCGCATTTTCTCAACATGCGTTACCTCCCGCATCGTTGA
AGAGATTTCCCTCTGGTTATGAGGATCCATTCACAGACATGGTCGCACCG
TTCGAACCTGCGCCGCCCGAGCAACCTCCTGATTCTATAGATCATAACAA
TAAACTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCACTCTATTAGATT
ACTCTCTACGCCGCACCTCAATATCGCTCTCTGCTCAGCTGCACGGCATG
TTTTTTCTTGCAGAATCGCCTTGGACTACATCTCCTACCGAGAATGCCCC
GCCTCAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAACCTATTTCAGA
TAACAGGGTCTGTTACCCTCCCACGGAGCTTACGCTACATAATGACGGAG
CAAGGCGATCGGATCCCTATCCTGGCTCAAGAACTCACTGTGTCTGCTAC
TGAGTCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGTCCCTTGGAAGA
CTCCCGCCACTAATGTGAATCCCTCGGCTGAAGATGGGAACAATAATTCT
AGCGGGAACGGTGGTAACCCTAATAGCAACAATCCTACTATTAAGGTTGA
AAAGGAGCCACCTCCGATTCCACTAGATATCATGGCTGGACAAGACCTTG
ATACTGACTACGCCACCTTCCCCATTGCCTGGAAACGACTCCAATTCCGC
GTTGCTACTGCGAATAATGGACGCAGAAAGGAGCTTCAGCAGCACTTTGT
TATTCGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGCCAAGATACCAG
TCTGCGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGCGGAGTCCACGC
AACTTTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGTGCTGCGGCGTC
GCGGAAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAACCGAACCACAA
CCGGCGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGAGCAGTTCCCCA
GAGACGTCTACCTCACAAGGTGGTGTAGTTGGACAACAAGCTTCACCGGA
TTGGGCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCCCTCGACGACTT
TGCCTCACTCGACAGTATATACTCAGTCTAGCCCGGAGTTCTCGCGGCCA
ACAGAAGCCCAACGACATCCAGCTGCCGCCCCCATCAATCTATCTCTCCT
CGAAGATGATGATGGTAATGATTCGGCTAACCCGGCTGATCCGGCCAGGC
CGGCGGCCTCATATACAAACGATATGTCTCACAAGCTTATGAACATGGAT
AATTCTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCTCATGGCTTGCC
CGAAACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACTGAATACTGCCA
ATATGCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAAATGAGAGTGCC
GACTTATTATATGAGTATTTTCCCTTGGGCTTGGATGATTGGCAAGCACC
CGTCGATGCAGTATATCGACCACATGTAGTGCATCACACAAACTTACCTG
AAGTGAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGTATTTCGCCGCA
GAAGATGTTTTTTGAATGGAGGGCTTTGATACCATGGCTATGCCTTACCT
GGCCAGCCCGTTATCGCTGGGCAATATACAGAGCACCGATTACCTCAATT
CAATGTCCGGCATGGACCTACCTGAACAACGTTCTAATTTCGACTCTGAA
ACATTCGTGAGTGGGGACGACATCGCATTTTCTCAACATGCGTTACCTCC
CGCATCGTTGAAGAGATTTCCCTCTGGTTATGAGGATCCATTCACAGACA
TGGTCGCACCGTTCGAACCTGCGCCGCCCGAGCAACCTCCTGATTCTATA
GATCATAACAATAAACTGCTGAGCTTCTCCATGCCTGCGTACGGCTTCAC
TCTATTAGATTACTCTCTACGCCGCACCTCAATATCGCTCTCTGCTCAGC
TGCACGGCATGTTTTTTCTTGCAGAATCGCCTTGGACTACATCTCCTACC
GAGAATGCCCCGCCTCAGCAAGGAGCGGAGCTGACGTGCTACCGCCGCAA
CCTATTTCAGATAACAGGGTCTGTTACCCTCCCACGGAGCTTACGCTACA
TAATGACGGAGCAAGGCGATCGGATCCCTATCCTGGCTCAAGAACTCACT
GTGTCTGCTACTGAGTCTGTTGAAGGCAATTCCGTCAAGATTATCTCGGT
CCCTTGGAAGACTCCCGCCACTAATGTGAATCCCTCGGCTGAAGATGGGA
ACAATAATTCTAGCGGGAACGGTGGTAACCCTAATAGCAACAATCCTACT
ATTAAGGTTGAAAAGGAGCCACCTCCGATTCCACTAGATATCATGGCTGG
ACAAGACCTTGATACTGACTACGCCACCTTCCCCATTGCCTGGAAACGAC
TCCAATTCCGCGTTGCTACTGCGAATAATGGACGCAGAAAGGAGCTTCAG
CAGCACTTTGTTATTCGCTTGAAGGTTGTAGCTACGCTGTCCACCGGTGC
CAAGATACCAGTCTGCGAGGTGCAGTCGGGCCCCGTCATAGTCCGGGGGC
GGAGTCCACGCAACTTTCAGTCTCGCAAGGACCTGCCATTGAGCAACAGT
GCTGCGGCGTCGCGGAAAAGCGCACAAGCCGCTCAGTCGGCTGCTGTTAA
CCGAACCACAACCGGCGATCCTGCGGCTAAGGCCAAAGCCACATTGAAGA
GCAGTTCCCCAGAGACGTCTACCTCACAAGGTGGTGTAGTTGGACAACAA
GCTTCACCGGATTGGGCGCAAGTGCCGCCTCCCGTTGGCGGTGCGCATCC
CTCGACGACTTTGCCTCACTCGACAGTATATACTCAGTCTAGCCCGGAGT
TCTCGCGGCCAACAGAAGCCCAACGACATCCAGCTGCCGCCCCCATCAAT
CTATCTCTCCTCGAAGATGATGATGGTAATGATTCGGCTAACCCGGCTGA
TCCGGCCAGGCCGGCGGCCTCATATACAAACGATATGTCTCACAAGCTTA
TGAACATGGATAATTCTGCAGCGCCCCCGGCCAAAATGCGCAAGTTGTCT
CATGGCTTGCCCGAAACACAATCCCGAAGCTCGTCCTCTTTGCCTTTACT
GAATACTGCCAATATGCAGCAGCCCTTCGCTTCCACGCTCCCATTTCCAA
ATGAGAGTGCCGACTTATTATATGAGTATTTTCCCTTGGGCTTGGATGAT
TGGCAAGCACCCGTCGATGCAGTATATCGACCACATGTAGTGCATCACAC
AAACTTACCTGAAGTGAAATTTGTTGCTGCGCGCGGACGAAGCAAACGGT
ATTTCGCCGCAGAAGATGTTTTTTGAATGGAGGGCTTTGATACCATGGCT
ATGCCTTACCTGGCCAGCCCGTTATCGCTGGGCAATATACAGAGCACCGA
TTACCTCAATTCAATGTCCGGCATGGACCTACCTGAACAACGTTCTAATT
TCGACTCTGAAACATTCGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006995KJC3_006995Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006995-T1KJC3_006995-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006995-T1.cdsKJC3_006995-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006995-T1.exon2KJC3_006995-T1.exon2Aspergillus niger KJC3exon
KJC3_006995-T1.exon1KJC3_006995-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008967
DBxrefInterPro:IPR037141
DBxrefInterPro:IPR024061
DBxrefPFAM:PF05224
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1145903..1147722 -
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