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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1189595..1191769- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007004-T1 ID=KJC3_007004-T1|Name=KJC3_007004-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2175bp|location=Sequence derived from alignment at ch5:1189595..1191769- (Aspergillus niger KJC3)
ATGGATGCGCCCGAGGATCCCTTATCAAGCCCCTTCAAAGTGTCGACAGA
AGTCCAGGAAGATCCCATCCCTGAGCACGAATTCTACGAATCGCACGACG
ATCAGGGAATGGATAATGAGGACGTTGAATCGGTGATGCCAGCACCTAGC
TCGCCGTTCCAATTTAATGCAAGAGAAGAGACTGTGGACTTTCAGAGACT
GCGGGCCCTTAATCGGCAGGTGTCTCCGGGGGGGTTCGGGGACCACTCCA
TGACGCCTAGAAAGCGCTCCTACGAACAAGTCCCTGACGATACGGATGGA
GATGTGACCCCCAATGATAGATACAAGAAGGGGACTGGTCCGAGGGGCAC
TCCTGATATCAATGTCTACGCTGATGAGGACGCTGGATTCATTGCTGATC
ACAACCTGGTAGAAGATGCTGGCCAGGAAGTTGTGAATAGCATGGTGGAG
GAGAAGAACAATGAAGGCATGAGCACTGTCCTCCATGAGGATGATAAAGA
TAGCGCCCAAGAAATGGATGGGAACCTTGACCTGCAGGAAGCAGACGACG
CGATGACTGATGACTCTAACGAATCTATGGATGAAACACGCCTCAGCACT
TTCTCCGCCATTCCAGATATGACCACTTTTGCGCAACTTCGAAATGATTC
GCCTTACAAGACATCGCGGCCTCATCTGAGTGACGCGGAACTGGCCAGCC
CTTCCCCCGCAAGGAAGTCTCCTCGACGAAGCATTCTCAATAACATGGGA
AGCTCTCTTGCATCCCCTCTACCACGGAAGCGAGAATCAAGAAGCATCCA
TGATACCCCTAATTTGCTTGATTTGACCGATCAGCCGAATATTTACCCCC
GTCAACGTTACAGTGTACAAAACGAGCGCTACTCTCCTTCCCGCCGGTCT
CCCTTGAGGACTGCCAGAGATTCCGTGAGATCACCTGCGAAGGCTTCCCT
TTTGGATTTCGACATTCCTTCTGTGCCTACTCCTCGGTCAATTCCAACGG
TCACCCCTCGGGAGCTTGAGACTCTGAAATCCGGCTTCCTCTCCGAGATC
TCTTCCCTCAAGGCGACTCTCAGCGGAAAGGAGGCGGAGGTTGCCAGCCT
CAAACAGGCAGTTGCAGATGCGGAACGTCGTGTGGGGGAAGCTCTGGAAG
AGGTCCGTAACGAAGTTGCGCGCAAGGAAACCCTGGAATTCGAGCAAGCT
GAGTGGGAACGAAGGGGCCAAGAAATGGAAGCAATCCTTAGAGAAGTGAG
AGCGGAAATTGTTGAGGGAGAACAAGAGAAGGAACGATTGGCACGGAAAT
TGGATGAGGCAGAGAAGTCTAGAGAGCAGTTAGAGGGCAGAGTAGTCGAA
CTGGAGAGCCAGTTGGCTTCGGCTCTCCAGTCTGCCTCCGCTGGCAACGC
AGCACCTGAGAATACGTCTCGCACCAAGACATCCGAGGAGACCGCCAAGG
AAGTGCAGGACGCCGTGGAAAAGGTTGCACGTGAGCTTCATACGCTTTAC
AAGAGCAAGCACGAAACCAAGGTTGCTGCATTGAAGAAGAGTTACGAAGC
TCGCTGGGAAAAGCGCGTGCGTGAAGCCGAGAATAAGCTGACAGCCGCCA
ACGAAGAGAATGAGCGATTGAAGATAGAGCGAGATGCCGCCATGTCAGAG
CCCCCACGAGTCGACCCCAGTTTATTGTCACACGAGCGGGAGGAGCACGA
AGCAGAGAAGCGTGTGCTGGAGGCACAGATCAACGGCTTACAACAGGAAA
TGACGGCACTGAAAGAAGACAACGAACGCCTGCACGCGGAGCTGAAGCAG
GAGCGAGCAGAGAAAGGCGAGTTGGTGGCAGCCGTGGATGAATGGTTGGC
AATCCAGCAGGACCAGCCCCCAGCACAGGGCGACCCCCAGCCTTTGACCA
CCAGAGAGCTTGAGTCGCCAGAGCCAGTGCTTGTTGCCCCGGAACCACCC
ACTGGGAGTTTCCAAAGAAGCGTAAGCCATGGCAGCACCTCGAGTGGCAT
TCGTCCTCCAAGTACCACCTCGAGCAATGGTGAAAAGAGAATCCCTAAAA
TCGGAGCAATGGGCAACAGACATGCTCGAGGCAACAGCGGCAGCAAGTCC
GGAATTGCGGTTCCCACACCCGGACGAAGTGGTATCATGGGATCCATTGA
ACGAATGGGCCGTGGCGGTGCTTAA back to topCoding sequence (CDS) from alignment at ch5:1189595..1191769- >KJC3_007004-T1 ID=KJC3_007004-T1|Name=KJC3_007004-T1|organism=Aspergillus niger KJC3|type=CDS|length=2175bp|location=Sequence derived from alignment at ch5:1189595..1191769- (Aspergillus niger KJC3)
ATGGATGCGCCCGAGGATCCCTTATCAAGCCCCTTCAAAGTGTCGACAGA
AGTCCAGGAAGATCCCATCCCTGAGCACGAATTCTACGAATCGCACGACG
ATCAGGGAATGGATAATGAGGACGTTGAATCGGTGATGCCAGCACCTAGC
TCGCCGTTCCAATTTAATGCAAGAGAAGAGACTGTGGACTTTCAGAGACT
GCGGGCCCTTAATCGGCAGGTGTCTCCGGGGGGGTTCGGGGACCACTCCA
TGACGCCTAGAAAGCGCTCCTACGAACAAGTCCCTGACGATACGGATGGA
GATGTGACCCCCAATGATAGATACAAGAAGGGGACTGGTCCGAGGGGCAC
TCCTGATATCAATGTCTACGCTGATGAGGACGCTGGATTCATTGCTGATC
ACAACCTGGTAGAAGATGCTGGCCAGGAAGTTGTGAATAGCATGGTGGAG
GAGAAGAACAATGAAGGCATGAGCACTGTCCTCCATGAGGATGATAAAGA
TAGCGCCCAAGAAATGGATGGGAACCTTGACCTGCAGGAAGCAGACGACG
CGATGACTGATGACTCTAACGAATCTATGGATGAAACACGCCTCAGCACT
TTCTCCGCCATTCCAGATATGACCACTTTTGCGCAACTTCGAAATGATTC
GCCTTACAAGACATCGCGGCCTCATCTGAGTGACGCGGAACTGGCCAGCC
CTTCCCCCGCAAGGAAGTCTCCTCGACGAAGCATTCTCAATAACATGGGA
AGCTCTCTTGCATCCCCTCTACCACGGAAGCGAGAATCAAGAAGCATCCA
TGATACCCCTAATTTGCTTGATTTGACCGATCAGCCGAATATTTACCCCC
GTCAACGTTACAGTGTACAAAACGAGCGCTACTCTCCTTCCCGCCGGTCT
CCCTTGAGGACTGCCAGAGATTCCGTGAGATCACCTGCGAAGGCTTCCCT
TTTGGATTTCGACATTCCTTCTGTGCCTACTCCTCGGTCAATTCCAACGG
TCACCCCTCGGGAGCTTGAGACTCTGAAATCCGGCTTCCTCTCCGAGATC
TCTTCCCTCAAGGCGACTCTCAGCGGAAAGGAGGCGGAGGTTGCCAGCCT
CAAACAGGCAGTTGCAGATGCGGAACGTCGTGTGGGGGAAGCTCTGGAAG
AGGTCCGTAACGAAGTTGCGCGCAAGGAAACCCTGGAATTCGAGCAAGCT
GAGTGGGAACGAAGGGGCCAAGAAATGGAAGCAATCCTTAGAGAAGTGAG
AGCGGAAATTGTTGAGGGAGAACAAGAGAAGGAACGATTGGCACGGAAAT
TGGATGAGGCAGAGAAGTCTAGAGAGCAGTTAGAGGGCAGAGTAGTCGAA
CTGGAGAGCCAGTTGGCTTCGGCTCTCCAGTCTGCCTCCGCTGGCAACGC
AGCACCTGAGAATACGTCTCGCACCAAGACATCCGAGGAGACCGCCAAGG
AAGTGCAGGACGCCGTGGAAAAGGTTGCACGTGAGCTTCATACGCTTTAC
AAGAGCAAGCACGAAACCAAGGTTGCTGCATTGAAGAAGAGTTACGAAGC
TCGCTGGGAAAAGCGCGTGCGTGAAGCCGAGAATAAGCTGACAGCCGCCA
ACGAAGAGAATGAGCGATTGAAGATAGAGCGAGATGCCGCCATGTCAGAG
CCCCCACGAGTCGACCCCAGTTTATTGTCACACGAGCGGGAGGAGCACGA
AGCAGAGAAGCGTGTGCTGGAGGCACAGATCAACGGCTTACAACAGGAAA
TGACGGCACTGAAAGAAGACAACGAACGCCTGCACGCGGAGCTGAAGCAG
GAGCGAGCAGAGAAAGGCGAGTTGGTGGCAGCCGTGGATGAATGGTTGGC
AATCCAGCAGGACCAGCCCCCAGCACAGGGCGACCCCCAGCCTTTGACCA
CCAGAGAGCTTGAGTCGCCAGAGCCAGTGCTTGTTGCCCCGGAACCACCC
ACTGGGAGTTTCCAAAGAAGCGTAAGCCATGGCAGCACCTCGAGTGGCAT
TCGTCCTCCAAGTACCACCTCGAGCAATGGTGAAAAGAGAATCCCTAAAA
TCGGAGCAATGGGCAACAGACATGCTCGAGGCAACAGCGGCAGCAAGTCC
GGAATTGCGGTTCCCACACCCGGACGAAGTGGTATCATGGGATCCATTGA
ACGAATGGGCCGTGGCGGTGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024312 |
| DBxref | PFAM:PF12709 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1189595..1191769 - |
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