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KJC3_007005-T2, KJC3_007005-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007005-T2
Unique NameKJC3_007005-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1192250..1194788-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007005-T2 ID=KJC3_007005-T2|Name=KJC3_007005-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2539bp|location=Sequence derived from alignment at ch5:1192250..1194788- (Aspergillus niger KJC3)
AATCTCTCTCTGCCTGCAAGAAAATGACTATCATCTGGTTCCGAGAACCA
GTCAACCTGCTTTTTCACTGTCCCCACTTCTCCACCGTCGCCTTTTTTAT
TGCCGGTCCCTTTCTTTCTTCTTCCCGGCTTCCCGCTCGCTCTCTCGCTC
TCTCCTCTGCGTTTCTTCCTTCAACAAGCCGAGACACTTGGCCGCCGATC
TTGTGAATTCTCCAGTCTCTGCTCCTTCTGCTACTGTGTCACCTTCCCCC
TTTCTTGACCCAGAGCGAAAGCATTCAGTGGTATCGTTAGATCGAGAACT
GACTCGATACAAGTTTATCGGCAATTGTGGTGTTCTTTTGCGCTCGGCAC
TTTCCATTTTCGATCTGCACTGTCAAACCAGACGCAAACAAGGACACTTC
AAGAGGAGGGCCATTAGCAAGGGTTTTGTTGTTTTGCGGAGGGCTTGCCG
TAAGAGACTTAGTTTTCTGTACAGAAGATGGTATTAACACTGCAGCAAAG
ACCAACCGCCTCGGACCATAAGTTTCCCACTGTTCAGCTCTTCCTTCTAT
GTATGCAGATCCGTTGCCCTTTGCTGCGTTTGCTTTGCTAACGCCTGTTC
CTGGGTAGCAATATGCCGCGTCGCAGAGCCAATCGCCTTGACTTCCATCT
TCCCATACTCATGGGTAATGGTCAGGGACTTCCATGTGGCTGATACCAAC
AGCGCTTCTTTCTATGCGGGAATCCTCGTCTCCGCTTTCTCCCTCTGTGA
AGCCCTCACCGGTATGTTTTGGGGCGGGCTTTCAGACCGTGTCGGCCGCA
AACCCGTTCTCATCTCCGGCTGTTTTGGCACGATGCTATCCCTCCTCATC
GTGGGATTCGCCTCTAATTTCTGGGTTGCCCTCTTTGGACGGGCCCTGGG
TGGAATATTGAATGGGAATATTGGTGTGATTCAGACCATGGTCGGTGAGT
TGGTCAAGAATCCGGAGCATGAACGTAAGAATATTCTCGTATCCCCTGTT
TGTGGTGGTACTTGTGGTGGTACTCGTTAGTTGGAGCTGCTGCTGACTGT
GCGCGCCTATAGCTCGAGCTTACGCTGTGATGCCTTTCGTGTGGTCAATT
GGTACGATTATCGGGCCAGGTAAGTGCGATGGTAATCTGAAGGTACAAAT
GGAAACGGGTGTTAATGGCTTCATCCGCTGCAGCGATTGGAGGGTTGCTT
GCAAAGCCTGCTGAAGGTTTCCCCTCCTTGTTCTCCATGAATGGCCTATT
TGGCAAATTCCCTTACCTTCTGCCTAATCTCGTCTGCTCCGGATTACTTC
TCTGCAGCATTATCTCCAGCTGGATCTTGCTCGAGGAGACGCATCCTGAT
ATGCAACCATGCAGAATGCCAGATGACCTGGATCATCCGTCCGTGGAGCG
TCCTCTTCTTGCAACTGCAGGAGCTACCGCCAATGCAGGCGCAGATTTAC
GTGCAGAGTCCTACGGTACTTTCAACCAAGTCCATCTCCATGAGGATGAA
GACTGGACGGTGTACGCCGATGGTTCAAAGCCCGAATCCACTTCGCAGAA
ACCGACTATTTTCACGTGGCGAGTGACCATGCTTATTATTGCCTTGGCAA
TCTTCACTTACCATTCGATGACATATGACCATCTGTTGCCCATCTTCTTG
CAGGATAAGAATGCCAGCAGCATCTCCGCGTTGTCAAATTCAGCTTTTCG
TTTTCCAGGTGGAGTCGGTCTCTCAACTCGGACCGTTGGATTGATCATGT
CAAGTGATGGCATAATTGCACTTGTCATCCAGAGCCTTATCTTCCCTTTC
CTGGCTCAGCGCTTGGGTGTCTGGAGGCTCTTCGTTGTCGTCACCATTCT
TCATCCGCTGGCCTATTTCATCGTACCCTTCCTCATCTTCCTTCCTAGCC
AACATGTGATCTTCGGCATCTACACCTGCTTGGTTGTCCGCAACATTCTC
TCGATTATCGATTACCCCGTCCTTCTCATTCTCATCAAACAAGCCAGTCC
CTCCGATTCCGTTCTCGGAAAGATCAATGGACTCGCGGCCTCGGCCGGCG
CCTTCTCACGCACGATGGCGCCACCAATTGCAGGCTTCTTGTACAGTACG
GGCTCCAAGATCGATTTCACGGCCCTGGCCTGGTGGGGAAGCACTTTTGT
CGCAGTCATCGGCGCGGTGCAGCTCTTTTTCATCGAACAGAAGAAACATG
CCTCTATTACAGTTCAACCAGCTGCACATTGCCACTATGCGTCACATACC
ACGCCAGTCAAAGATGAGACGGTCCATATCATCGTGACAGATGTCGATAG
TGATGGGACTGGCCATGTCTAGGAGAACTACTGCCTGAGCGCAACAGTGG
GACAAATTCATGAGACTTGTTTGCCTGAGAGTTCTGCGTTCTAGTCTGGC
ATACTATGATACCACGATATTGCTTTTATCGAAAATGTTTATGATTTGCT
GTGCTGCATTCTAGCGCTTACAGGGTATCAAGGTGTCGATCACTGTATAT
AGATAGGATAATACCAAAATTTCATATACTACTTAACAA
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Coding sequence (CDS) from alignment at ch5:1192250..1194788-

>KJC3_007005-T2 ID=KJC3_007005-T2|Name=KJC3_007005-T2|organism=Aspergillus niger KJC3|type=CDS|length=1158bp|location=Sequence derived from alignment at ch5:1192250..1194788- (Aspergillus niger KJC3)
ATGGCTTCATCCGCTGCAGCGATTGGAGGGTTGCTTGCAAAGCCTGCTGA
AGGTTTCCCCTCCTTGTTCTCCATGAATGGCCTATTTGGCAAATTCCCTT
ACCTTCTGCCTAATCTCGTCTGCTCCGGATTACTTCTCTGCAGCATTATC
TCCAGCTGGATCTTGCTCGAGGAGACGCATCCTGATATGCAACCATGCAG
AATGCCAGATGACCTGGATCATCCGTCCGTGGAGCGTCCTCTTCTTGCAA
CTGCAGGAGCTACCGCCAATGCAGGCGCAGATTTACGTGCAGAGTCCTAC
GGTACTTTCAACCAAGTCCATCTCCATGAGGATGAAGACTGGACGGTGTA
CGCCGATGGTTCAAAGCCCGAATCCACTTCGCAGAAACCGACTATTTTCA
CGTGGCGAGTGACCATGCTTATTATTGCCTTGGCAATCTTCACTTACCAT
TCGATGACATATGACCATCTGTTGCCCATCTTCTTGCAGGATAAGAATGC
CAGCAGCATCTCCGCGTTGTCAAATTCAGCTTTTCGTTTTCCAGGTGGAG
TCGGTCTCTCAACTCGGACCGTTGGATTGATCATGTCAAGTGATGGCATA
ATTGCACTTGTCATCCAGAGCCTTATCTTCCCTTTCCTGGCTCAGCGCTT
GGGTGTCTGGAGGCTCTTCGTTGTCGTCACCATTCTTCATCCGCTGGCCT
ATTTCATCGTACCCTTCCTCATCTTCCTTCCTAGCCAACATGTGATCTTC
GGCATCTACACCTGCTTGGTTGTCCGCAACATTCTCTCGATTATCGATTA
CCCCGTCCTTCTCATTCTCATCAAACAAGCCAGTCCCTCCGATTCCGTTC
TCGGAAAGATCAATGGACTCGCGGCCTCGGCCGGCGCCTTCTCACGCACG
ATGGCGCCACCAATTGCAGGCTTCTTGTACAGTACGGGCTCCAAGATCGA
TTTCACGGCCCTGGCCTGGTGGGGAAGCACTTTTGTCGCAGTCATCGGCG
CGGTGCAGCTCTTTTTCATCGAACAGAAGAAACATGCCTCTATTACAGTT
CAACCAGCTGCACATTGCCACTATGCGTCACATACCACGCCAGTCAAAGA
TGAGACGGTCCATATCATCGTGACAGATGTCGATAGTGATGGGACTGGCC
ATGTCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007005KJC3_007005Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007005-T2KJC3_007005-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007005-T2.cdsKJC3_007005-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007005-T2.utr3p1KJC3_007005-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007005-T2.exon3KJC3_007005-T2.exon3Aspergillus niger KJC3exon
KJC3_007005-T2.exon2KJC3_007005-T2.exon2Aspergillus niger KJC3exon
KJC3_007005-T2.exon1KJC3_007005-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007005-T2.utr5p3KJC3_007005-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_007005-T2.utr5p2KJC3_007005-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007005-T2.utr5p1KJC3_007005-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1192250..1194788 -
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