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KJC3_007006-T2, KJC3_007006-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007006-T2
Unique NameKJC3_007006-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1195783..1197182-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007006-T2 ID=KJC3_007006-T2|Name=KJC3_007006-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch5:1195783..1197182- (Aspergillus niger KJC3)
CGTCAACTCTTGATCCCTGGGGATAAGATAACCATCCCTTTCACAGCGAA
TTCGCCAGCCATGCTACTACGGCATAGCGCCTCTAGGGTGCTATTTCTTT
TCTCTGCCTTTTTGCTCTGGACTTCATTTGTGGTGGCTTCCTGTAAGTCT
TCCCCGGTCGTCTGGTGTCCGATGCTGGCTCCGCTTTTACTGTCAAAAAT
AGAGAGGCTAATAGTCAAACGCAGCCCCCGCGTCATTCTGCAAGTGCACC
TGCTTCTCCAACAGTACGATCATCCCTCTCGATCCCGACTCTTCCGAATC
GACGTCGGCCTTGAACGGTGTCTCCCACTTCCTCCGTCGCAGCGATGATG
CAGCAATCTTGGGTACGAGAGCGAAGAATTATCGCTCTTTGAACTGCAAT
GATTGTAACCGGAAGTTCTGCTTGGACTATGATTTGCCCACCTGTCATGG
CGCCAAAGAAGATGATGTCTTCACAACCTGTTTCCGTATGAGCCAATTCA
CCCTCGAGTCACTTGCCATTGTTCGTGCTATGCTAACATGACGTCTGTGC
CTCAGAGAGAGACTCCCGGAAAGACCAAGCCATTGTATTCATGTTTATCA
TTGCTACTGGCAGTCTGCTTGCCTGGGCGATCTTTAAGCCTTGGGTAGAG
AAGTGGCTCGAGGTATCTTATTCATCAGGTCCACGGCTTTCTTTTACGGA
AGCGCTGACTCGTTCTAAAGGCTGCGAGAGAGCGGCGATTATATATCCCA
GTGTCCGAAAATGCTGGTCGTTAGGGACACATGTCATAGCCAGATCATAC
ACTATCATAGTCCGGTACCTTTTCACCCGGAGACCCAGTCCAGTCGCTCG
AGGCCATCGAAGCAGGCCATCTGCGGCACCAAGGGTCAAATGAATCGACG
TTACGGATGGCCGTCAGGATCGGAGCGCGACTCACGCTTGACATATGCTA
CCTAATGCATGCTTTGACATAACAGCACGTGAGCATAACAGCCCAAATCT
GCCTCCTCATAAAGGCAATCATTTCTTGGTGGGCCTTACCTTGGCAAAAT
GTACAGATCGGCCAGTGCCTTCTCAGTTCAAGCAATATTCTGCAACCTGT
TATCTGAAGGGTTGCTAGTTGTCTGATTGTAAATACAAGAAGTATAGATT
CAAGACCTACACATTTCGATCTATGTCTTTCATTACCATAGTATCCGTTA
TCCTTAATGTATCGAACCAATTGATGGCTAGAATACGTTGCGGAGATATA
AAGAAAATTACTATGGTCATCCTGGCTTTAAACTGAACCTTCCAAGAACA
ATGACAACATCCTGGCAGTAGATCCAGACAAAGCAGAACGGTCCACGGTC
TAGACCGAGCAATCGATGACACAATTGCATATATTGCATATCACTCCACA
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Coding sequence (CDS) from alignment at ch5:1195783..1197182-

>KJC3_007006-T2 ID=KJC3_007006-T2|Name=KJC3_007006-T2|organism=Aspergillus niger KJC3|type=CDS|length=2043bp|location=Sequence derived from alignment at ch5:1195783..1197182- (Aspergillus niger KJC3)
AGAGAGACTCCCGGAAAGACCAAGCCATTGTATTCATGTTTATCATTGCT
ACTGGCAGTCTGCTTGCCTGGGCGATCTTTAAGCCTTGGGTAGAGAAGTG
GCTCGAGGTATCTTATTCATCAGGTCCACGGCTTTCTTTTACGGAAGCGC
TGACTCGTTCTAAAGGCTGCGAGAGAGCGGCGATTATATATCCCAGTGTC
CGAAAATGCTGGTCGTTAGGGACACATGTCATAGCCAGATCATACACTAT
CATAGTCCGGTACCTTTTCACCCGGAGACCCAGTCCAGTCGCTCGAGGCC
ATCGAAGCAGGCCATCTGCGGCACCAAGGGTCAAATGACCCCCGCGTCAT
TCTGCAAGTGCACCTGCTTCTCCAACAGTACGATCATCCCTCTCGATCCC
GACTCTTCCGAATCGACGTCGGCCTTGAACGGTGTCTCCCACTTCCTCCG
TCGCAGCGATGATGCAGCAATCTTGGGTACGAGAGCGAAGAATTATCGCT
CTTTGAACTGCAATGATTGTAACCGGAAGTTCTGCTTGGACTATGATTTG
CCCACCTGTCATGGCGCCAAAGAAGATGATGTCTTCACAACCTGTTTCCA
TGCTACTACGGCATAGCGCCTCTAGGGTGCTATTTCTTTTCTCTGCCTTT
TTGCTCTGGACTTCATTTGTGGTGGCTTCCTAGAGAGACTCCCGGAAAGA
CCAAGCCATTGTATTCATGTTTATCATTGCTACTGGCAGTCTGCTTGCCT
GGGCGATCTTTAAGCCTTGGGTAGAGAAGTGGCTCGAGGTATCTTATTCA
TCAGGTCCACGGCTTTCTTTTACGGAAGCGCTGACTCGTTCTAAAGGCTG
CGAGAGAGCGGCGATTATATATCCCAGTGTCCGAAAATGCTGGTCGTTAG
GGACACATGTCATAGCCAGATCATACACTATCATAGTCCGGTACCTTTTC
ACCCGGAGACCCAGTCCAGTCGCTCGAGGCCATCGAAGCAGGCCATCTGC
GGCACCAAGGGTCAAATGACCCCCGCGTCATTCTGCAAGTGCACCTGCTT
CTCCAACAGTACGATCATCCCTCTCGATCCCGACTCTTCCGAATCGACGT
CGGCCTTGAACGGTGTCTCCCACTTCCTCCGTCGCAGCGATGATGCAGCA
ATCTTGGGTACGAGAGCGAAGAATTATCGCTCTTTGAACTGCAATGATTG
TAACCGGAAGTTCTGCTTGGACTATGATTTGCCCACCTGTCATGGCGCCA
AAGAAGATGATGTCTTCACAACCTGTTTCCATGCTACTACGGCATAGCGC
CTCTAGGGTGCTATTTCTTTTCTCTGCCTTTTTGCTCTGGACTTCATTTG
TGGTGGCTTCCTAGAGAGACTCCCGGAAAGACCAAGCCATTGTATTCATG
TTTATCATTGCTACTGGCAGTCTGCTTGCCTGGGCGATCTTTAAGCCTTG
GGTAGAGAAGTGGCTCGAGGTATCTTATTCATCAGGTCCACGGCTTTCTT
TTACGGAAGCGCTGACTCGTTCTAAAGGCTGCGAGAGAGCGGCGATTATA
TATCCCAGTGTCCGAAAATGCTGGTCGTTAGGGACACATGTCATAGCCAG
ATCATACACTATCATAGTCCGGTACCTTTTCACCCGGAGACCCAGTCCAG
TCGCTCGAGGCCATCGAAGCAGGCCATCTGCGGCACCAAGGGTCAAATGA
CCCCCGCGTCATTCTGCAAGTGCACCTGCTTCTCCAACAGTACGATCATC
CCTCTCGATCCCGACTCTTCCGAATCGACGTCGGCCTTGAACGGTGTCTC
CCACTTCCTCCGTCGCAGCGATGATGCAGCAATCTTGGGTACGAGAGCGA
AGAATTATCGCTCTTTGAACTGCAATGATTGTAACCGGAAGTTCTGCTTG
GACTATGATTTGCCCACCTGTCATGGCGCCAAAGAAGATGATGTCTTCAC
AACCTGTTTCCATGCTACTACGGCATAGCGCCTCTAGGGTGCTATTTCTT
TTCTCTGCCTTTTTGCTCTGGACTTCATTTGTGGTGGCTTCCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007006KJC3_007006Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007006-T2KJC3_007006-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007006-T2.cdsKJC3_007006-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007006-T2.utr3p1KJC3_007006-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007006-T2.exon3KJC3_007006-T2.exon3Aspergillus niger KJC3exon
KJC3_007006-T2.exon2KJC3_007006-T2.exon2Aspergillus niger KJC3exon
KJC3_007006-T2.exon1KJC3_007006-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007006-T2.utr5p1KJC3_007006-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1195783..1197182 -
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