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KJC3_007011-T1, KJC3_007011-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007011-T1
Unique NameKJC3_007011-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1206058..1207263-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007011-T1 ID=KJC3_007011-T1|Name=KJC3_007011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1206bp|location=Sequence derived from alignment at ch5:1206058..1207263- (Aspergillus niger KJC3)
ATGGCACCTCCGCTTCCCCCTCACTCCGAGTCCCCCGCACGCGGGCGTCC
CGATGAAGACGACGAAGAGGAGGACTACATGTCCATGATCATCGAAGAGC
CCCAGCAGAAGGAAACCTTTGCGCAAAAGAAGAAGCGCCAGCAACGTGAG
GTAGGCTTTTCAGGCAAATATCCGTTCAGATTCAGCTTCAGCTCCACCTA
ACCTTTCTCTTAATCGCAGGCCGAAGCGCGAGCCAAAGTCCCTTCCAAAG
CCGAACGCGCCGCTCAAGAAGCTGCCCGTCGCGATGCCGCCTTATCAACC
AGCACGCTCGACCCTTCCAACAAAGGGTTTCAAATGATGGCCAAGCTGGG
ATTCAAGCCGGGCCAAGTACTCGGAAAACCTACCGCGCCATCACAAGATA
GTGAGAAGGACACCAAGGATCCCCAAGATCGAATTCGGTCTGAGCCCCTT
AATCTCATCTTCAAGGAAGACCGAGGAGGAATCGGTCTCGACTCGGAGCG
AAAACGGAAGTTCCTCGAAGAAGCTGCGGAAGTAACCAAGAAGGTCAAGC
AAGAAGAGGGCGATTACCGCGACCGCGTCCGGTTGGAGCGCGAGACACGA
CGGCTCGAGGCCCAATTCTATGCGGGGCAGAAGGTGGCTGAGCGCTTAGA
TGCGGAGGCCGAGGGGGAAGGGGAGATAGAGCCACCACCAACTGAGACCA
ACGGAGAAGAGAAAGAGGAGCAAGAATCGCATGCGATACCGGATGTGGAA
GGCGAAGAGCCACAGACAGATACCTCCACATCAACTACAAAGAAAGCTAA
GAGGCCCGTCAAACCAACATCTCAGATCAACATTCTCTACCGGGGGTTGG
TGCGCGAGCGGCAAGAAAAGGAGCGCGCCGTGCAGACACGCCACATGTTG
CAGACATCGCTGCCGTCATCGTTCTTCCCGAACCCTCGATTGCCGGGCTA
TGAAGACTCGACGCTCGACCCTGAGGACCATGAGGCGCTGGGAGGCCGCC
GAGAGATGTCCTCCATTCTTGAACAGGAGCTAGAAGAAGAGGATCCAGAA
CTGGAGGAATTCAACGCGCTGGAGCCAGGCGAACGACTGGGCCGGCTGGT
TCAATATTTGCGGGAAAAACACCACTACTGCTTCTGGTGCAAGTATCGCT
ACGAGACCGCCGAGATGGAAGGATGTCCCGGCGTGACGGAGGAGGATCAT
GACTAA
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Coding sequence (CDS) from alignment at ch5:1206058..1207263-

>KJC3_007011-T1 ID=KJC3_007011-T1|Name=KJC3_007011-T1|organism=Aspergillus niger KJC3|type=CDS|length=2274bp|location=Sequence derived from alignment at ch5:1206058..1207263- (Aspergillus niger KJC3)
GCCGAAGCGCGAGCCAAAGTCCCTTCCAAAGCCGAACGCGCCGCTCAAGA
AGCTGCCCGTCGCGATGCCGCCTTATCAACCAGCACGCTCGACCCTTCCA
ACAAAGGGTTTCAAATGATGGCCAAGCTGGGATTCAAGCCGGGCCAAGTA
CTCGGAAAACCTACCGCGCCATCACAAGATAGTGAGAAGGACACCAAGGA
TCCCCAAGATCGAATTCGGTCTGAGCCCCTTAATCTCATCTTCAAGGAAG
ACCGAGGAGGAATCGGTCTCGACTCGGAGCGAAAACGGAAGTTCCTCGAA
GAAGCTGCGGAAGTAACCAAGAAGGTCAAGCAAGAAGAGGGCGATTACCG
CGACCGCGTCCGGTTGGAGCGCGAGACACGACGGCTCGAGGCCCAATTCT
ATGCGGGGCAGAAGGTGGCTGAGCGCTTAGATGCGGAGGCCGAGGGGGAA
GGGGAGATAGAGCCACCACCAACTGAGACCAACGGAGAAGAGAAAGAGGA
GCAAGAATCGCATGCGATACCGGATGTGGAAGGCGAAGAGCCACAGACAG
ATACCTCCACATCAACTACAAAGAAAGCTAAGAGGCCCGTCAAACCAACA
TCTCAGATCAACATTCTCTACCGGGGGTTGGTGCGCGAGCGGCAAGAAAA
GGAGCGCGCCGTGCAGACACGCCACATGTTGCAGACATCGCTGCCGTCAT
CGTTCTTCCCGAACCCTCGATTGCCGGGCTATGAAGACTCGACGCTCGAC
CCTGAGGACCATGAGGCGCTGGGAGGCCGCCGAGAGATGTCCTCCATTCT
TGAACAGGAGCTAGAAGAAGAGGATCCAGAACTGGAGGAATTCAACGCGC
TGGAGCCAGGCGAACGACTGGGCCGGCTGGTTCAATATTTGCGGGAAAAA
CACCACTACTGCTTCTGGTGCAAGTATCGCTACGAGACCGCCGAGATGGA
AGGATGTCCCGGCGTGACGGAGGAGGATCATGACTAAATGGCACCTCCGC
TTCCCCCTCACTCCGAGTCCCCCGCACGCGGGCGTCCCGATGAAGACGAC
GAAGAGGAGGACTACATGTCCATGATCATCGAAGAGCCCCAGCAGAAGGA
AACCTTTGCGCAAAAGAAGAAGCGCCAGCAACGTGAGGCCGAAGCGCGAG
CCAAAGTCCCTTCCAAAGCCGAACGCGCCGCTCAAGAAGCTGCCCGTCGC
GATGCCGCCTTATCAACCAGCACGCTCGACCCTTCCAACAAAGGGTTTCA
AATGATGGCCAAGCTGGGATTCAAGCCGGGCCAAGTACTCGGAAAACCTA
CCGCGCCATCACAAGATAGTGAGAAGGACACCAAGGATCCCCAAGATCGA
ATTCGGTCTGAGCCCCTTAATCTCATCTTCAAGGAAGACCGAGGAGGAAT
CGGTCTCGACTCGGAGCGAAAACGGAAGTTCCTCGAAGAAGCTGCGGAAG
TAACCAAGAAGGTCAAGCAAGAAGAGGGCGATTACCGCGACCGCGTCCGG
TTGGAGCGCGAGACACGACGGCTCGAGGCCCAATTCTATGCGGGGCAGAA
GGTGGCTGAGCGCTTAGATGCGGAGGCCGAGGGGGAAGGGGAGATAGAGC
CACCACCAACTGAGACCAACGGAGAAGAGAAAGAGGAGCAAGAATCGCAT
GCGATACCGGATGTGGAAGGCGAAGAGCCACAGACAGATACCTCCACATC
AACTACAAAGAAAGCTAAGAGGCCCGTCAAACCAACATCTCAGATCAACA
TTCTCTACCGGGGGTTGGTGCGCGAGCGGCAAGAAAAGGAGCGCGCCGTG
CAGACACGCCACATGTTGCAGACATCGCTGCCGTCATCGTTCTTCCCGAA
CCCTCGATTGCCGGGCTATGAAGACTCGACGCTCGACCCTGAGGACCATG
AGGCGCTGGGAGGCCGCCGAGAGATGTCCTCCATTCTTGAACAGGAGCTA
GAAGAAGAGGATCCAGAACTGGAGGAATTCAACGCGCTGGAGCCAGGCGA
ACGACTGGGCCGGCTGGTTCAATATTTGCGGGAAAAACACCACTACTGCT
TCTGGTGCAAGTATCGCTACGAGACCGCCGAGATGGAAGGATGTCCCGGC
GTGACGGAGGAGGATCATGACTAAATGGCACCTCCGCTTCCCCCTCACTC
CGAGTCCCCCGCACGCGGGCGTCCCGATGAAGACGACGAAGAGGAGGACT
ACATGTCCATGATCATCGAAGAGCCCCAGCAGAAGGAAACCTTTGCGCAA
AAGAAGAAGCGCCAGCAACGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007011KJC3_007011Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007011-T1KJC3_007011-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007011-T1.cdsKJC3_007011-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007011-T1.exon2KJC3_007011-T1.exon2Aspergillus niger KJC3exon
KJC3_007011-T1.exon1KJC3_007011-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR025239
DBxrefInterPro:IPR000467
DBxrefPFAM:PF01585
DBxrefPFAM:PF13821
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1206058..1207263 -
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