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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1243070..1248231- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007023-T1 ID=KJC3_007023-T1|Name=KJC3_007023-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5162bp|location=Sequence derived from alignment at ch5:1243070..1248231- (Aspergillus niger KJC3)
TTTACTTTCTTTCCTGCCTGACCGTGTGATCACCTACCTTGTCGGGCCCC
TGCGTTTCGTTCTGTATCTATATCAACTCGGAATATATCACGACGCCGCC
GAACGCGCTTACAAATGTACAGTGTTAAACCCGCAGCCACCCAATCTCGT
CTCCGCTGACCGTGTTACTTCTTTAGCTATTGGGAACACGTCTTACAGCC
TTATTCTAACTTGGGCACGCATCACTATCGCCCACCATGGCAAAGAGCAA
GAACAAGGCCGCTAACAAACAAAAGAATAAGAAGGGCAAGAACCAAGAGG
CCTCTGGGAATCAGACACCTCAGCCTGACCCTCCTGTTGTTGAGCAACAA
CAAGAAGAACAACAAGTGGAACAGCAACAGCAATTAGAACAACAAGAGAC
ACCTCAGCCTGAGCTATCTACCCCTGAGCCAGAGCAACAACCAGAGCAAG
AGGAACAACAACCACCACCAGAGACACCTCAACCCGAGCTCTCCACCTCG
GAGCAAGAGGCCCAGCCTGAGAGCCAACAAGAGGCCCCTCAGGAGGACCA
GCAAGACCCGCAGCAAGAGTCGTCACAGCCCGAGGTCTCCACTGAAGAGC
CGGTATCAGAGCCCCAGCAAGTAGAAGAGCAAGTTCAGGAGCCACCGACA
GCTCAGCTTGAGCCCACCTCTGAACAAGCAGAACAGCAACCAGAGGGTCT
GCAAGAACAGCAAGACATACAACCTGACGAGCAGCCACAAGAACAACCGC
CCACTGAAGCTGAAGCTCAAGTTGAACCTGAAGCTGTAGCTGAACCTGCA
GCTGAGGCGCCGATCGAATCACAGCCGGCAGAAACAGAGCCCGTATCTGA
AACCGTACCAGAACCTCCACAAGAACCAGAGTCGGTGCCAGACCAAGGAC
CGGAACTGGAGCAATCACAGGCTTCCGTCGAGCCAGACTCGACTGTGCCC
GTAGACGAGGCACCAGTCCAGCCGCCGGCGAACGAGGAGGGTGGGTTCGA
GCAACCGGCAGTTCCTGAGCCCGCCCAAGTTGAGCAATCCGACGTGAACG
ATGTGCAGACCTATTCTGAACAGCCACAAGAGTCGAGCTGGGAGGAAATA
GGCACATCGGAACAACACGCGGGTGACGCTGAGGAGCACCACGAGACCAA
CCCTTTCCTGACTGAAGCTAGCGGCGCCGCTGAAACAGTCGAGGAGACGC
CAGTAACAGCACCGCAGACACCGCTGGATTCTTCATTCGTCCCGACCCAG
TCGTGGGAGCCCTTGGAGGAACCACAGCCCCAGACGGACAGTTCATTCGT
GGCAGCACCCTTTGGCTCCAACACTGGAGCTCCAGAGACTTACTCGCATA
TTCCTGAAATGTCTGAACCTTTCGCCGATACAGTGGTCGCTCAGCCTACG
CCTTTCTCTGATACGTTCGCCCCCTCAAGCGCTACTCCCGCTTCGAAGCC
TGGTTCTCCGATTCCCCAAAGCGGTTCACCAATCCAACGCACTGCATCCC
CGTCTTTCAAGTCTATGTCGCCTGGTCCTCAGAGCGCTGCTGCTACACCA
CGTGCCACTTCACCGGTGCACCAATCTGCGTCGCCAGTTCGACCTTACCA
TTCTCCGGTGCAGCAGTATACCTCACCGATGGCCCAACCCGCCTCGCCAA
TACGGGAAGCAACGGTTCTGTCGCAAAGGAGCTCCTCTCCCACACCGCCA
GGCGCTTCTCCCGTATTTCAATCAGCTTCACCCGCCGTGCAACAATATTC
TCCAGTGCAGAAGGTTGCATCACCTGTGCAAAAGACCGTATCACCTGTAC
AGAAACACGTCTCGCCTGTCGCGAAACCCGCTTCACCCGTTCCGAAAGTC
AGCAGTCCTCTAGCACGTGGGCACATGTCTCCGATGATGTCCCCACAAAT
GGCTCCTCCGCCAATGACGGCGAGGATGCCTCCACAGCCAACCGCCATAC
CGCCCTACCCCCCCTCCTATCACTCGCCTATCATGAGCGCCAATGGCTTC
CTCCCCCAGTATGCCTACTATCAACCTTCCCCCAACATGCATCCGACCCC
TCGAGGCTCTATAGACCCCGGGTCGGCTGCTTCCTTCCAGGCCCTGCAGA
ACCTGGGCTTCGGCAATGGCCATCCTCTGAATGGCAAAGGAGGCACCATC
TCGCCCCCACACGAACATGAAGAGCCTATTGAGCTTCTACAGAGGATCCA
GGATGCCATTCCCGACATCGGCCGATTGCTCAATAGCTACAAGACCACCA
AGGGCAAGTTGCAGGCGCGGGAGTCAGAGTTCAAGCAGATGAAGAACCAA
CATGAGCAGGACTTGATGCACAAAGACTTCTACATCGATGCCCTGCAGAA
TCAGATGCGGAAGGCAGCCAGTGAAAGTGCGGAGGAATCAACGAGACTCA
AGAATACCATCAATGAGCTCCGCATGGAGCTGGGCAACGAGAATGAGAAG
AAGAAGGACCTTCAGGAGAGGCTACATGATGCGGAGAAGGCCAATGAGGA
GCTATCGCAGACCAAGGCCGAGCTGGAGGAGGAGGTCAAGACCCTCAACA
CCAACCTTCAAGAGGCACACGAGACCTACGAGAGGGATATGGAGGCTGCC
AGACAGGACAAGGAGTCCTCTCTTGCCACTCAGAAGCAAGAGCTGACGGA
GATGTTCGAGGAGATCAAGGCAGAAGACGAGAAGGCAGCAGCTGAGGCTC
TCGCAGCACGCGAGCGCGAGTTGCTCGACCAGCAGGACGCGATGAAGAAC
GATTACGAGAACCAGAAGCAACAGATGCAGGAAGCGCACGATACACTGCA
AGCCGATTTCGACTCGAAGGTTACCGAGCTGGGTTCGACAAAGGAAGAAC
TTGAAACCAGAACTACCGAACTCGCAGACAAGCAGAAGGAACTGGAGACT
ACCATTGAGACAAACGCCAAGGAGATGGAGGACCTCCGTCAGACCCACGC
TAGCGAAGTCGAGTCCCTCAACAATAGCCACGCAGAGAAGGTGGCAGAGA
TGGAGAAGGAGCACAGCGACCAGCAGCAGAAGTGGGCTGATGAGAAGGCC
GACTTGGAGGGACGGCTCTCGGACAAGATCCAGGCCTTGGAGTTCTGCGA
GCGGGAGAACAAGAAACTGGAGGAGGATAATCTTGTCAAGGAGAAGCAGG
TTCAGCATGCGGTGGATGGAATGCGCCTCACCATTGATAATTTGGACAAA
GATTGCGACAGGCTGAGAAAGACCCTTCACAGCCTTGGAGAAGCCACTGA
CCTCAAGAGCACGAAGGGTGATACATTCTTGTAAGTGACCCAGTGCATTG
AGAATGTGTTTTAGTACCCGACTTTCGTTTATGATCTCTCATCTTCCGAT
GTTCTTTTCCTTATTCTTTTTTTCTTTTTTCTTTCTTCTGCATTATCTTT
GCATTTTAATTTCGATGTCATGTTTGCATTTTTCTTCTTTTCTGCATGAA
CATGAACCAGAACCAGAACCAGACCACAGTCTTTTGTTTGTTTCATTTCC
TTTGTCTTTTCTCCTGTTCTCCTGTCTTTTTCTATAGACTGATCATGATG
ATGACTATGATGACATGTTGATAACGCTATAAATGTACGTGCTCTGATAA
ACATCTCCGAAATCTAGTTTGGACTGTTTCGGCCAGCTTTCTCGGCTTAT
TGTCTCCTTGTCCAAGGAGCACTTCTCGTACCTTCCAATTGATCCTCCCA
AGGACATTCTATCCAAACTTCCATCGGAACTACCATCGTTCCTTGATAAC
ACCCCGGCATCGTGCGAGCTTCGTTCAGCATATGTCCAGCATGTCATTTC
TAAGACCTTGACCTACCGCATCTTTCATCCTTTCCTGTTCACCCTGGGGC
GCCGGTTCGATAAGGCCGATACCTTCTTCCAGATGCTGTCGATGGATATC
CGCCGCAAGTCCGTAAGACGGGAAGCGTTCTGGAGACAGCAGACGCTGAA
GGCCGCGTACACGACTTCGGACGCTAAGCAATCGATCAACGTGGTGGCCG
CCGTCATTGTTGATGAAATCATCGACCAGCTGAAGCACTTTGCCGACCCA
AGGAACCTGGATGCTCTGCTCATCGCGGTCCGCAAGATTGTCAAGCTTGC
AGCTGAGACCTGGCGACTTGCGCGCGTGGAACGTGAGCTGATTCTGGCCT
CGCTGCCGTCGCCCGACGCCGATGCCGTCTCCAATGATGACTGGGAAGAG
TACGGCACGCCCAAGGAGGGCAGCCTTAGCTCCAAGGAAGACCCCACTCG
CCATGTTATCCTGCGCACCTTCCCTCGGATCACGCGCGAGGCAGCTCACG
AGGATTTCGCGGGCGACGAAGAAAAGTACAACCCCTGCACGTACTCCCGT
GGCTGTGTTCTGTACTCCGACTCCCCTGTGGTCATGGCCCGTCTCCAAGA
ATTGGCTAAGAAGTCAGAGGATTCGCCTCGTCGTGGTTCAAGAGACTCGA
CCCGTTCCGATGGGTCGCCCTCTCCCCGCCGGAGTCGGGACGGCATGAGG
ACATGAACGAGAGCTTCGAGTAGTGCGATGTGAGTGGCTATGTTGACCAG
GATACTGTTTTAATAACCGGCTTGTTTCAAATACTTTTGATCTTTCCCCA
TTTTGTCTTATCTTGCCGGCCCGACCCTCGCGGGGCTGCGGGGCCTCAAC
AATCCTTCTGGTTTCCTATGTCTTCCAACGTTTTTGATCATGACCGAGAC
GACTTTTTTTATGAGAGGGTCCCTACACCCGTTCCTTTCTCTAACCAGTG
TATTTTTTCCGACACATTTTATTTTCTTCTTCTCGAAGCTATCATGTTAT
TTCGGGGTTGCGCCTCTTTTGTGTGTGTGTTATGTTTTCATCTTGCGTGT
TTTAGCGAGCATTTGATCTTTCGATGTGTAACAAACAAACAATCAATGTA
TGTGGAACTACTACTATATTTATCTATTACCCGGACCTGGAAGCCCCTCA
CAGCACCTGCACAGCATGTACTTATTGGATACGATGGACGAGTTGATGAG
AAGATGCGCAAGAGACTGGGGATGATCTGCGACCCCAGCGCGAGATGATG
AGAAAATGAATGAATCAATCTGATGAAAATTGAATTCTGATTGTTTGCAA
CCCTTCCAGCCAAGGCTTTACTCCGCCCGATAGACAGGTGTAGTCTAGGA
CCGTAAACCAAC back to topCoding sequence (CDS) from alignment at ch5:1243070..1248231- >KJC3_007023-T1 ID=KJC3_007023-T1|Name=KJC3_007023-T1|organism=Aspergillus niger KJC3|type=CDS|length=3048bp|location=Sequence derived from alignment at ch5:1243070..1248231- (Aspergillus niger KJC3)
ATGGCAAAGAGCAAGAACAAGGCCGCTAACAAACAAAAGAATAAGAAGGG
CAAGAACCAAGAGGCCTCTGGGAATCAGACACCTCAGCCTGACCCTCCTG
TTGTTGAGCAACAACAAGAAGAACAACAAGTGGAACAGCAACAGCAATTA
GAACAACAAGAGACACCTCAGCCTGAGCTATCTACCCCTGAGCCAGAGCA
ACAACCAGAGCAAGAGGAACAACAACCACCACCAGAGACACCTCAACCCG
AGCTCTCCACCTCGGAGCAAGAGGCCCAGCCTGAGAGCCAACAAGAGGCC
CCTCAGGAGGACCAGCAAGACCCGCAGCAAGAGTCGTCACAGCCCGAGGT
CTCCACTGAAGAGCCGGTATCAGAGCCCCAGCAAGTAGAAGAGCAAGTTC
AGGAGCCACCGACAGCTCAGCTTGAGCCCACCTCTGAACAAGCAGAACAG
CAACCAGAGGGTCTGCAAGAACAGCAAGACATACAACCTGACGAGCAGCC
ACAAGAACAACCGCCCACTGAAGCTGAAGCTCAAGTTGAACCTGAAGCTG
TAGCTGAACCTGCAGCTGAGGCGCCGATCGAATCACAGCCGGCAGAAACA
GAGCCCGTATCTGAAACCGTACCAGAACCTCCACAAGAACCAGAGTCGGT
GCCAGACCAAGGACCGGAACTGGAGCAATCACAGGCTTCCGTCGAGCCAG
ACTCGACTGTGCCCGTAGACGAGGCACCAGTCCAGCCGCCGGCGAACGAG
GAGGGTGGGTTCGAGCAACCGGCAGTTCCTGAGCCCGCCCAAGTTGAGCA
ATCCGACGTGAACGATGTGCAGACCTATTCTGAACAGCCACAAGAGTCGA
GCTGGGAGGAAATAGGCACATCGGAACAACACGCGGGTGACGCTGAGGAG
CACCACGAGACCAACCCTTTCCTGACTGAAGCTAGCGGCGCCGCTGAAAC
AGTCGAGGAGACGCCAGTAACAGCACCGCAGACACCGCTGGATTCTTCAT
TCGTCCCGACCCAGTCGTGGGAGCCCTTGGAGGAACCACAGCCCCAGACG
GACAGTTCATTCGTGGCAGCACCCTTTGGCTCCAACACTGGAGCTCCAGA
GACTTACTCGCATATTCCTGAAATGTCTGAACCTTTCGCCGATACAGTGG
TCGCTCAGCCTACGCCTTTCTCTGATACGTTCGCCCCCTCAAGCGCTACT
CCCGCTTCGAAGCCTGGTTCTCCGATTCCCCAAAGCGGTTCACCAATCCA
ACGCACTGCATCCCCGTCTTTCAAGTCTATGTCGCCTGGTCCTCAGAGCG
CTGCTGCTACACCACGTGCCACTTCACCGGTGCACCAATCTGCGTCGCCA
GTTCGACCTTACCATTCTCCGGTGCAGCAGTATACCTCACCGATGGCCCA
ACCCGCCTCGCCAATACGGGAAGCAACGGTTCTGTCGCAAAGGAGCTCCT
CTCCCACACCGCCAGGCGCTTCTCCCGTATTTCAATCAGCTTCACCCGCC
GTGCAACAATATTCTCCAGTGCAGAAGGTTGCATCACCTGTGCAAAAGAC
CGTATCACCTGTACAGAAACACGTCTCGCCTGTCGCGAAACCCGCTTCAC
CCGTTCCGAAAGTCAGCAGTCCTCTAGCACGTGGGCACATGTCTCCGATG
ATGTCCCCACAAATGGCTCCTCCGCCAATGACGGCGAGGATGCCTCCACA
GCCAACCGCCATACCGCCCTACCCCCCCTCCTATCACTCGCCTATCATGA
GCGCCAATGGCTTCCTCCCCCAGTATGCCTACTATCAACCTTCCCCCAAC
ATGCATCCGACCCCTCGAGGCTCTATAGACCCCGGGTCGGCTGCTTCCTT
CCAGGCCCTGCAGAACCTGGGCTTCGGCAATGGCCATCCTCTGAATGGCA
AAGGAGGCACCATCTCGCCCCCACACGAACATGAAGAGCCTATTGAGCTT
CTACAGAGGATCCAGGATGCCATTCCCGACATCGGCCGATTGCTCAATAG
CTACAAGACCACCAAGGGCAAGTTGCAGGCGCGGGAGTCAGAGTTCAAGC
AGATGAAGAACCAACATGAGCAGGACTTGATGCACAAAGACTTCTACATC
GATGCCCTGCAGAATCAGATGCGGAAGGCAGCCAGTGAAAGTGCGGAGGA
ATCAACGAGACTCAAGAATACCATCAATGAGCTCCGCATGGAGCTGGGCA
ACGAGAATGAGAAGAAGAAGGACCTTCAGGAGAGGCTACATGATGCGGAG
AAGGCCAATGAGGAGCTATCGCAGACCAAGGCCGAGCTGGAGGAGGAGGT
CAAGACCCTCAACACCAACCTTCAAGAGGCACACGAGACCTACGAGAGGG
ATATGGAGGCTGCCAGACAGGACAAGGAGTCCTCTCTTGCCACTCAGAAG
CAAGAGCTGACGGAGATGTTCGAGGAGATCAAGGCAGAAGACGAGAAGGC
AGCAGCTGAGGCTCTCGCAGCACGCGAGCGCGAGTTGCTCGACCAGCAGG
ACGCGATGAAGAACGATTACGAGAACCAGAAGCAACAGATGCAGGAAGCG
CACGATACACTGCAAGCCGATTTCGACTCGAAGGTTACCGAGCTGGGTTC
GACAAAGGAAGAACTTGAAACCAGAACTACCGAACTCGCAGACAAGCAGA
AGGAACTGGAGACTACCATTGAGACAAACGCCAAGGAGATGGAGGACCTC
CGTCAGACCCACGCTAGCGAAGTCGAGTCCCTCAACAATAGCCACGCAGA
GAAGGTGGCAGAGATGGAGAAGGAGCACAGCGACCAGCAGCAGAAGTGGG
CTGATGAGAAGGCCGACTTGGAGGGACGGCTCTCGGACAAGATCCAGGCC
TTGGAGTTCTGCGAGCGGGAGAACAAGAAACTGGAGGAGGATAATCTTGT
CAAGGAGAAGCAGGTTCAGCATGCGGTGGATGGAATGCGCCTCACCATTG
ATAATTTGGACAAAGATTGCGACAGGCTGAGAAAGACCCTTCACAGCCTT
GGAGAAGCCACTGACCTCAAGAGCACGAAGGGTGATACATTCTTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007023-T1.utr3p1 | KJC3_007023-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1243070..1248231 - |
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