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KJC3_007035-T1, KJC3_007035-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007035-T1
Unique NameKJC3_007035-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1275997..1277613-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007035-T1 ID=KJC3_007035-T1|Name=KJC3_007035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1617bp|location=Sequence derived from alignment at ch5:1275997..1277613- (Aspergillus niger KJC3)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGTGCGTACCACACATC
TTATGCTTCGCGAGTATATCTTGGACTAACATGGCCCCATTGGGCATATT
TAGGCTGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCC
CCAATCAAGCAAGCGCAATGGCGACAATGACGAAGATGAGGATAACGAAG
ATGTGATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATG
CAGGAAGCCCCGGAAGCATCGAGCGATGCTGAAGTAGCCGCCGAGGCGCC
CAGCCGCAAACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACA
TGCGTCGCATTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAA
GAGAAGGCGAAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGC
CGAGCAATCAGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATG
AGGAAAAGAAGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAG
TCGAAGGAACTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTC
TAGTGAGGCGATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACC
TGGCATCTTTCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTG
GAATCTATTCGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCC
CAAGCGAGCCTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGT
GCACCAACGCATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCG
CCCGCTGCGCTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGA
CAGTGTCGCGCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTG
GTAACCTGGACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAG
AAGAAGAAGCGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTT
CAACGCTCACACCGGTCGTTCGAATAAGGAAAAACCCAAGAATGGCAATG
TTGAATCAGTCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGA
TTTGCCTACGTTCAATTCTATGATCAAAACTGTGTAGAGGAGGCTCTTGT
ACTCAATGGAAAGCATTATCCGCCTATGCTCCCCCGCAAACTCCGCGTGT
CGCGTGCCAAGAAGGTTTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAG
AAGACGCTTGGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACT
ATTTGGTCGGGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCA
TCTCGCAGAACTCGACGGTGTTCGAAGGCCATCGGGCCACCGAAGGTTCG
CACATTCGGGTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAA
CCGGAGCAGCAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGA
AGGGGAAGACGGATTAA
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Coding sequence (CDS) from alignment at ch5:1275997..1277613-

>KJC3_007035-T1 ID=KJC3_007035-T1|Name=KJC3_007035-T1|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch5:1275997..1277613- (Aspergillus niger KJC3)
GCTGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCCCCA
ATCAAGCAAGCGCAATGGCGACAATGACGAAGATGAGGATAACGAAGATG
TGATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATGCAG
GAAGCCCCGGAAGCATCGAGCGATGCTGAAGTAGCCGCCGAGGCGCCCAG
CCGCAAACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACATGC
GTCGCATTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAG
AAGGCGAAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGCCGA
GCAATCAGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATGAGG
AAAAGAAGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAGTCG
AAGGAACTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTCTAG
TGAGGCGATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACCTGG
CATCTTTCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTGGAA
TCTATTCGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAA
GCGAGCCTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGTGCA
CCAACGCATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCC
GCTGCGCTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGACAG
TGTCGCGCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTGGTA
ACCTGGACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAGAAG
AAGAAGCGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTTCAA
CGCTCACACCGGTCGTTCGAATAAGGAAAAACCCAAGAATGGCAATGTTG
AATCAGTCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGATTT
GCCTACGTTCAATTCTATGATCAAAACTGTGTAGAGGAGGCTCTTGTACT
CAATGGAAAGCATTATCCGCCTATGCTCCCCCGCAAACTCCGCGTGTCGC
GTGCCAAGAAGGTTTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAGAAG
ACGCTTGGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACTATT
TGGTCGGGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCATCT
CGCAGAACTCGACGGTGTTCGAAGGCCATCGGGCCACCGAAGGTTCGCAC
ATTCGGGTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAACCG
GAGCAGCAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGAAGG
GGAAGACGGATTAAATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGG
GCAAAGACATCCATCGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGC
TGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCCCCAAT
CAAGCAAGCGCAATGGCGACAATGACGAAGATGAGGATAACGAAGATGTG
ATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATGCAGGA
AGCCCCGGAAGCATCGAGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCC
GCAAACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACATGCGT
CGCATTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAA
GGCGAAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGC
AATCAGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATGAGGAA
AAGAAGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAGTCGAA
GGAACTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTCTAGTG
AGGCGATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACCTGGCA
TCTTTCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTGGAATC
TATTCGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGC
GAGCCTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGTGCACC
AACGCATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGC
TGCGCTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGACAGTG
TCGCGCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTGGTAAC
CTGGACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAA
GAAGCGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTTCAACG
CTCACACCGGTCGTTCGAATAAGGAAAAACCCAAGAATGGCAATGTTGAA
TCAGTCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGATTTGC
CTACGTTCAATTCTATGATCAAAACTGTGTAGAGGAGGCTCTTGTACTCA
ATGGAAAGCATTATCCGCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGT
GCCAAGAAGGTTTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGAC
GCTTGGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACTATTTG
GTCGGGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCG
CAGAACTCGACGGTGTTCGAAGGCCATCGGGCCACCGAAGGTTCGCACAT
TCGGGTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGA
GCAGCAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGG
AAGACGGATTAAATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGC
AAAGACATCCATCGATCCTACCCTAGCTGCCTTGTTTGAGACAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP12KJC3_007035Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007035-T1KJC3_007035-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007035-T1.cdsKJC3_007035-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007035-T1.exon2KJC3_007035-T1.exon2Aspergillus niger KJC3exon
KJC3_007035-T1.exon1KJC3_007035-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264IQ7
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034777
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductNucleolar protein 12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1275997..1277613 -
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