You are here

Home

KJC3_007039-T3, KJC3_007039-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007039-T3
Unique NameKJC3_007039-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1288102..1289750+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007039-T3 ID=KJC3_007039-T3|Name=KJC3_007039-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1649bp|location=Sequence derived from alignment at ch5:1288102..1289750+ (Aspergillus niger KJC3)
CTTGGGCACTATCAGGATCAACTTCCCTGTTCAATCAATTATATGCACTT
ACATTATGTCTTTTAACAGGACATCTACCCTGCAGTGGGCCGCATTGGAA
GCGGATCCCTGCAACTACATGCCTTACTTATTTCAGAAGTTGAAATGTCG
CGATGTGTGGAATTCACTTGACAGGGACACCGGTCAGGGGTGTTTTGTCG
CGCTGTTTGCTTGCGGGCATCGCCTTACTGCTGCTATGTTCATTTGAATC
AGCTTGGAATGAGGAAATCAGACCACGGGCTAGGAAGTCACCAGAGCGAC
TGACAAATAATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCC
GGCGCCTCCAATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTC
TTCTCACTCTGATCGTTTGCTGTCTCAGAGTATGTTAACCTTTCTACAAT
GACAGCATACACGAGCTGATCGACCTGCGTCTCCCTAGCTCTATCTTCGA
GGGTTCATCACGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTCTTGC
CTTGGTATGTACGATTTTCTATGGGGGATGAAATTGAACCCACCCTTAAC
CGCACTGAGCAGTGCATGGTCCTTGTGTTCGCAGCCCTCTCTATCATTCT
CACAACGTATGGAATTGGCTACCATCAGGAGACTGTTCCTACTGCAGATA
TGATCATGATGGAGAAGGTTAGTGCCTTGTCTGCCATTTGATTTCCTCTG
GCTCACCGTTGTAGTACGTCTATATCTTGTTCTGCCTATATCTCTGGGTG
GCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTTCC
GACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCA
TCGTCACCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCTGGCCAGTG
CAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAATGC
CGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCG
ATGTGAGCATCATCACTCTTCCAATGCCAACGATCTGGAAGCTCCAAATG
CCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGTATGTT
TGCATAGTTGTCGGTTTCCTTTCCCTGAACATCCTAGACTAATTGATCGA
AGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATT
TCCAAGTTAATTCGACCGACTATACATGTATGACGTCTCTTCTTTCCCTT
GCTACAAACTTGCTCTACTAATCCACACATCATAGACGTCGGCGCGGTTC
CACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCT
TTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAG
CAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATA
GCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGG
AAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGAT
TATCGTAACCACAACAGTAGAACAGGAATAGACAGTGCTGATGAATGCC
back to top

Coding sequence (CDS) from alignment at ch5:1288102..1289750+

>KJC3_007039-T3 ID=KJC3_007039-T3|Name=KJC3_007039-T3|organism=Aspergillus niger KJC3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch5:1288102..1289750+ (Aspergillus niger KJC3)
ATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCC
AATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTC
TGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCA
TTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTT
GTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTG
TTTTCGTCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGATTGGACTG
GGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTACCCTT
GATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAA
ACTCGAAGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAG
GCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCAATGCC
AACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTG
GATTATTTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATT
CCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATACGTCGGCGC
GGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCG
GCTCTTTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAAC
AGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGA
TCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTA
AAAGGAAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAG
CAGATTATCGTAACCACAACAGTAGAACAGGAATAGATGGCCGGTACAAG
TGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGTATATACAG
TGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGT
CTCAGACTCTATCTTCGAGGGTTCATCACGCATGCATTCGGCCTGGATGA
CTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTTGTTCTGCCTATATC
TCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGC
GTTTTTCCGACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCT
CATGGCCATCGTCACCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCT
GGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTT
TCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTT
ATTATTCGATGTGAGCATCATCACTCTTCCAATGCCAACGATCTGGAAGC
TCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTT
GGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTT
CCAAGTTAATTCGACCGACTATACATACGTCGGCGCGGTTCCACTCATAT
TGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCG
CTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAG
CACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATAGCGGATATC
ATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAA
GTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATTATCGTAAC
CACAACAGTAGAACAGGAATAGATGGCCGGTACAAGTGGCGTTCCTATGC
ATCTTCCTGATCCGGCGCCTCCAATGGTATATACAGTGAGGGGAGTGATT
GGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCT
TCGAGGGTTCATCACGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTC
TTGCCTTGTACGTCTATATCTTGTTCTGCCTATATCTCTGGGTGGCCTTG
GCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTTCCGACCAA
ATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCATCGTCA
CCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCA
GCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAATGCCGTGTT
AGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCGATGTGA
GCATCATCACTCTTCCAATGCCAACGATCTGGAAGCTCCAAATGCCTGTT
CAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGATTCGTGGCCTG
CAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTTCCAAGTTAATTCGA
CCGACTATACATACGTCGGCGCGGTTCCACTCATATTGATGAATGTCGAA
TATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCGCTGCGGGTTCTGCT
TAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCC
GAGATTGGAGAAATGGCCCTGATCATAGCGGATATCATCTCAGCGAACGG
GGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAAGTCGATCTTGAAAG
ATGCGATAACGAAAGTCAGCAGCAGATTATCGTAACCACAACAGTAGAAC
AGGAATAGATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCG
GCGCCTCCAATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCT
TCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCA
CGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTC
TATATCTTGTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAG
CCTTACTGTTTTCGTCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGA
TTGGACTGGGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAA
TTACCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGAC
CATCCCAAACTCGAAGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGC
TGTATCAGGCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTT
CCAATGCCAACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATT
CATTATTGGATTATTTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGG
CACGCATTCCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATAC
GTCGGCGCGGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCT
AATTACCGGCTCTTTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGG
GACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAAT
GGCCCTGATCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCA
TAAATCTAAAAGGAAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAA
GTCAGCAGCAGATTATCGTAACCACAACAGTAGAACAGGAATAGATGGCC
GGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGT
ATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTCTGATCG
TTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCATTCGGC
CTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTTGTTCTG
CCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCG
TCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGATTGGACTGGGAATC
ATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTACCCTTGATCTT
CCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGA
AGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATA
CTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCAATGCCAACGAT
CTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTAT
TTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTA
TTGGATTTCCAAGTTAATTCGACCGACTATACATACGTCGGCGCGGTTCC
ACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTT
TACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGC
AGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATAG
CGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGA
AGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATT
ATCGTAACCACAACAGTAGAACAGGAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007039KJC3_007039Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007039-T3KJC3_007039-T3-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007039-T3.utr5p1KJC3_007039-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007039-T3.exon1KJC3_007039-T3.exon1Aspergillus niger KJC3exon
KJC3_007039-T3.exon2KJC3_007039-T3.exon2Aspergillus niger KJC3exon
KJC3_007039-T3.exon3KJC3_007039-T3.exon3Aspergillus niger KJC3exon
KJC3_007039-T3.exon4KJC3_007039-T3.exon4Aspergillus niger KJC3exon
KJC3_007039-T3.exon5KJC3_007039-T3.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007039-T3.cdsKJC3_007039-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007039-T3.utr3p1KJC3_007039-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1288102..1289750 +
Powered by Drupal