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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1288102..1289750+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007039-T3 ID=KJC3_007039-T3|Name=KJC3_007039-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1649bp|location=Sequence derived from alignment at ch5:1288102..1289750+ (Aspergillus niger KJC3)
CTTGGGCACTATCAGGATCAACTTCCCTGTTCAATCAATTATATGCACTT
ACATTATGTCTTTTAACAGGACATCTACCCTGCAGTGGGCCGCATTGGAA
GCGGATCCCTGCAACTACATGCCTTACTTATTTCAGAAGTTGAAATGTCG
CGATGTGTGGAATTCACTTGACAGGGACACCGGTCAGGGGTGTTTTGTCG
CGCTGTTTGCTTGCGGGCATCGCCTTACTGCTGCTATGTTCATTTGAATC
AGCTTGGAATGAGGAAATCAGACCACGGGCTAGGAAGTCACCAGAGCGAC
TGACAAATAATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCC
GGCGCCTCCAATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTC
TTCTCACTCTGATCGTTTGCTGTCTCAGAGTATGTTAACCTTTCTACAAT
GACAGCATACACGAGCTGATCGACCTGCGTCTCCCTAGCTCTATCTTCGA
GGGTTCATCACGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTCTTGC
CTTGGTATGTACGATTTTCTATGGGGGATGAAATTGAACCCACCCTTAAC
CGCACTGAGCAGTGCATGGTCCTTGTGTTCGCAGCCCTCTCTATCATTCT
CACAACGTATGGAATTGGCTACCATCAGGAGACTGTTCCTACTGCAGATA
TGATCATGATGGAGAAGGTTAGTGCCTTGTCTGCCATTTGATTTCCTCTG
GCTCACCGTTGTAGTACGTCTATATCTTGTTCTGCCTATATCTCTGGGTG
GCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTTCC
GACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCA
TCGTCACCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCTGGCCAGTG
CAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAATGC
CGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCG
ATGTGAGCATCATCACTCTTCCAATGCCAACGATCTGGAAGCTCCAAATG
CCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGTATGTT
TGCATAGTTGTCGGTTTCCTTTCCCTGAACATCCTAGACTAATTGATCGA
AGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATT
TCCAAGTTAATTCGACCGACTATACATGTATGACGTCTCTTCTTTCCCTT
GCTACAAACTTGCTCTACTAATCCACACATCATAGACGTCGGCGCGGTTC
CACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCT
TTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAG
CAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATA
GCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGG
AAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGAT
TATCGTAACCACAACAGTAGAACAGGAATAGACAGTGCTGATGAATGCC back to topCoding sequence (CDS) from alignment at ch5:1288102..1289750+ >KJC3_007039-T3 ID=KJC3_007039-T3|Name=KJC3_007039-T3|organism=Aspergillus niger KJC3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch5:1288102..1289750+ (Aspergillus niger KJC3)
ATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCC
AATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTC
TGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCA
TTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTT
GTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTG
TTTTCGTCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGATTGGACTG
GGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTACCCTT
GATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAA
ACTCGAAGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAG
GCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCAATGCC
AACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTG
GATTATTTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATT
CCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATACGTCGGCGC
GGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCG
GCTCTTTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAAC
AGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGA
TCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTA
AAAGGAAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAG
CAGATTATCGTAACCACAACAGTAGAACAGGAATAGATGGCCGGTACAAG
TGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGTATATACAG
TGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGT
CTCAGACTCTATCTTCGAGGGTTCATCACGCATGCATTCGGCCTGGATGA
CTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTTGTTCTGCCTATATC
TCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGC
GTTTTTCCGACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCT
CATGGCCATCGTCACCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCT
GGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTT
TCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTT
ATTATTCGATGTGAGCATCATCACTCTTCCAATGCCAACGATCTGGAAGC
TCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTT
GGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTT
CCAAGTTAATTCGACCGACTATACATACGTCGGCGCGGTTCCACTCATAT
TGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCG
CTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAG
CACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATAGCGGATATC
ATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAA
GTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATTATCGTAAC
CACAACAGTAGAACAGGAATAGATGGCCGGTACAAGTGGCGTTCCTATGC
ATCTTCCTGATCCGGCGCCTCCAATGGTATATACAGTGAGGGGAGTGATT
GGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCT
TCGAGGGTTCATCACGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTC
TTGCCTTGTACGTCTATATCTTGTTCTGCCTATATCTCTGGGTGGCCTTG
GCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTTCCGACCAA
ATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCATCGTCA
CCGTTTCGGGGGAATTACCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCA
GCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAATGCCGTGTT
AGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCGATGTGA
GCATCATCACTCTTCCAATGCCAACGATCTGGAAGCTCCAAATGCCTGTT
CAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGATTCGTGGCCTG
CAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTTCCAAGTTAATTCGA
CCGACTATACATACGTCGGCGCGGTTCCACTCATATTGATGAATGTCGAA
TATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCGCTGCGGGTTCTGCT
TAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCC
GAGATTGGAGAAATGGCCCTGATCATAGCGGATATCATCTCAGCGAACGG
GGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAAGTCGATCTTGAAAG
ATGCGATAACGAAAGTCAGCAGCAGATTATCGTAACCACAACAGTAGAAC
AGGAATAGATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCG
GCGCCTCCAATGGTATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCT
TCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCA
CGCATGCATTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTC
TATATCTTGTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAG
CCTTACTGTTTTCGTCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGA
TTGGACTGGGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAA
TTACCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGAC
CATCCCAAACTCGAAGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGC
TGTATCAGGCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTT
CCAATGCCAACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATT
CATTATTGGATTATTTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGG
CACGCATTCCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATAC
GTCGGCGCGGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCT
AATTACCGGCTCTTTACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGG
GACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAAT
GGCCCTGATCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCA
TAAATCTAAAAGGAAGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAA
GTCAGCAGCAGATTATCGTAACCACAACAGTAGAACAGGAATAGATGGCC
GGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGT
ATATACAGTGAGGGGAGTGATTGGTGCATTCGGTCTTCTCACTCTGATCG
TTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCATTCGGC
CTGGATGACTGTCTTGTTCTTCTTGCCTTGTACGTCTATATCTTGTTCTG
CCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCG
TCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGATTGGACTGGGAATC
ATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTACCCTTGATCTT
CCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGA
AGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATA
CTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCAATGCCAACGAT
CTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTAT
TTTGTCTTGGATTCGTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTA
TTGGATTTCCAAGTTAATTCGACCGACTATACATACGTCGGCGCGGTTCC
ACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTT
TACCTTCGCTGCGGGTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGC
AGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATAG
CGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGA
AGGGTAAAGTCGATCTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATT
ATCGTAACCACAACAGTAGAACAGGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007039-T3.utr5p1 | KJC3_007039-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007039-T3.utr3p1 | KJC3_007039-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1288102..1289750 + |
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