|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1301106..1303131+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007046-T1 ID=KJC3_007046-T1|Name=KJC3_007046-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2026bp|location=Sequence derived from alignment at ch5:1301106..1303131+ (Aspergillus niger KJC3)
ATAAAATGTCGCGGATAGAGGGCTTTAGTATGATGAAGGGATAATCGGAA
CACAAGCTGAAGAATCGCAAGCGTGGGGCCCTGACTCGCGTGGTGGAGGA
TACCCGAGAACGAATGAGATGGAAGATCGAGTCCGAGCACGATGCTAGCG
CGCCCTTGTGGGCTCAAAACCTGCCAGGAACTGGACGCTGGGCGGCATAA
TATGTGGGCATAGTATCAGATCGAGGGTCGGTTCCAAGAGTCTGTGCAAG
CCATCCGAAAGCCATGTGGGGATCGGCGGAGATTGACTTTCGCGAATGAT
GAGAGAACCATCGATTTGGACATCTTTTGCCGGTGGCACCAGCACGGCAC
GCTCGACATCGAATTATGTAACTGACTGGATCCATCGCCCAAGAGTTTCA
ACTCGGTCCCAGTGAAGCCGAATGCTCTCATTCCAAGGAACACGTATGAA
GCTAGCAGTTGTGGTCTTGGCTCTGTTCGCAATTAAAAGATGAAATTCTC
TCAACTTTTCAAGGTCCCCCTTGCTTCAATGAAGGCTGCAGATGCGTACA
ACCGTTGAAGTAGCAGACAGAGACCTCTAATGGCAGATGGAGAGTCGAGT
TTCAGGTGGCGATGAATGCACGATCAGATTCCGATGTCCCATACAACGGT
GATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTTGTCCAGATTGTGGT
GGTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTC
TCGACGATTACCTGATTCTTCTGGCATTGGTACTTACTTGCCTGTCCTTC
TGGTTCTTGTTCCGTGCTTACATTGTTTACAGATCGCCAGCTTGGGCCAA
TCGGCTTTGTACATCATCTGTAAGTGGGATATTTCAACAACAGCCCGATC
AAGCACTGACCGTTGGGTTTCCTTTCGCAAAGTGGTTAAGCTCGCAGGAG
TCGGACATCACATGGAATATGTCGAAGAGACGCCTGAAAAGCTGGTGATC
CTGGAGAAGGTATAACTCCCTGGTTTGATTGTTAATGCCGACATGCCTAA
CATGATTCAGGGCCTGTATGCCAACGAGATTCTCGACTTCCCGTTCACAG
TCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACCTCCGAATCTTCACC
ACCCGATCGTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTCGG
ACATGGCCTCGGCATCCTATTTGCAGCCATCTTCCAGTGCTGGCCGATAA
CATACGTCTGGGATACAACCATTGAAGGAGGATCGTGCTTCAATCAACTG
GCCTTCTACCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTCCT
TCTGATCATGCCATTGCCATATGTCTGGAAATTACATACGCGAAAAGGAC
AGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCAGTTTGTAAGTATAT
ACTACCACCACCCCAGCCACGCACTGAACCAGAATCGACTAAACTTACAC
ACTCCGTCCTTACCAGAGGAGCTGTAGCCAGTATCTCGCGAATGACGATT
TTCTTTCAAGAAAATGCCACGACCGACCCAACCTGTACGTCCTTTCTCTC
CACATACCTCAACGAACTCCCACCCGGGCTAACCACATCAACTCAGGGAC
ATCCACCAACCTAGGAATCTGGACCATCCTAGAAGGCGGAATCATCATCA
TCGCCGCCTGTCTCCCACCCATTTGGCCCTTGATCATGCGCATTCTACCT
CAACAGCTGCGCAGCAAGGGCTCTTCTCAGACTCCGCAGTGCTATCATCG
CCGCTACCCAACCAGCCAAGGCAATGCCAAGACTCCGGAGGGCTTCTCTC
GACTCGGGGACAACAGTCAGTCGCGCAGATCGCATGTCCCATCGCTGGGA
AGTCAGACGATGGTGGCGCGGGAATCTGAGTACTATTCGGAAAATATCTC
GCTGGAGGAGGCGATGCACGGGTATGCGGTGCGGCCGAAAGAGGGTCAGT
AGATCCATAGATGTATTATAGTTGTG back to topCoding sequence (CDS) from alignment at ch5:1301106..1303131+ >KJC3_007046-T1 ID=KJC3_007046-T1|Name=KJC3_007046-T1|organism=Aspergillus niger KJC3|type=CDS|length=4050bp|location=Sequence derived from alignment at ch5:1301106..1303131+ (Aspergillus niger KJC3)
ATGAATGCACGATCAGATTCCGATGTCCCATACAACGGTGATGCGCTGAT
AGGCGTGTCCGTTGCGATTGCCGTTGTCCAGATTGTGGTGGTTGTAGCAC
GTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTCTCGACGATTAC
CTGATTCTTCTGGCATTGATCGCCAGCTTGGGCCAATCGGCTTTGTACAT
CATCTTGGTTAAGCTCGCAGGAGTCGGACATCACATGGAATATGTCGAAG
AGACGCCTGAAAAGCTGGTGATCCTGGAGAAGGGCCTGTATGCCAACGAG
ATTCTCGACTTCCCGTTCACAGTCACTCCAGCCAAAATCTCCATTCTGGT
CTTTTACCTCCGAATCTTCACCACCCGATCGTTCAAAAACATGGCATATA
TAGTCGGTGCTATCGTGCTCGGACATGGCCTCGGCATCCTATTTGCAGCC
ATCTTCCAGTGCTGGCCGATAACATACGTCTGGGATACAACCATTGAAGG
AGGATCGTGCTTCAATCAACTGGCCTTCTACCGCTATGTGTCGCCGCCCA
ATATCTTGACAGACGTCCTCCTTCTGATCATGCCATTGCCATATGTCTGG
AAATTACATACGCGAAAAGGACAGAAGTTGGCTTTAACGGGAGTATTCCT
CCTCGGCAGTTTAGGAGCTGTAGCCAGTATCTCGCGAATGACGATTTTCT
TTCAAGAAAATGCCACGACCGACCCAACCTGTACGTCCTTTCTCTCCACA
TACCTCAACGAACTCCCACCCGGGCTAACCACATCAACTCAGGGACATCC
ACCAACCTAGATGAATGCACGATCAGATTCCGATGTCCCATACAACGGTG
ATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTTGTCCAGATTGTGGTG
GTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTCT
CGACGATTACCTGATTCTTCTGGCATTGATCGCCAGCTTGGGCCAATCGG
CTTTGTACATCATCTTGGTTAAGCTCGCAGGAGTCGGACATCACATGGAA
TATGTCGAAGAGACGCCTGAAAAGCTGGTGATCCTGGAGAAGGGCCTGTA
TGCCAACGAGATTCTCGACTTCCCGTTCACAGTCACTCCAGCCAAAATCT
CCATTCTGGTCTTTTACCTCCGAATCTTCACCACCCGATCGTTCAAAAAC
ATGGCATATATAGTCGGTGCTATCGTGCTCGGACATGGCCTCGGCATCCT
ATTTGCAGCCATCTTCCAGTGCTGGCCGATAACATACGTCTGGGATACAA
CCATTGAAGGAGGATCGTGCTTCAATCAACTGGCCTTCTACCGCTATGTG
TCGCCGCCCAATATCTTGACAGACGTCCTCCTTCTGATCATGCCATTGCC
ATATGTCTGGAAATTACATACGCGAAAAGGACAGAAGTTGGCTTTAACGG
GAGTATTCCTCCTCGGCAGTTTAGGAGCTGTAGCCAGTATCTCGCGAATG
ACGATTTTCTTTCAAGAAAATGCCACGACCGACCCAACCTGTACGTCCTT
TCTCTCCACATACCTCAACGAACTCCCACCCGGGCTAACCACATCAACTC
AGGGACATCCACCAACCTAGATGAATGCACGATCAGATTCCGATGTCCCA
TACAACGGTGATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTTGTCCA
GATTGTGGTGGTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGG
CTTTAGCTCTCGACGATTACCTGATTCTTCTGGCATTGATCGCCAGCTTG
GGCCAATCGGCTTTGTACATCATCTTGGTTAAGCTCGCAGGAGTCGGACA
TCACATGGAATATGTCGAAGAGACGCCTGAAAAGCTGGTGATCCTGGAGA
AGGGCCTGTATGCCAACGAGATTCTCGACTTCCCGTTCACAGTCACTCCA
GCCAAAATCTCCATTCTGGTCTTTTACCTCCGAATCTTCACCACCCGATC
GTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTCGGACATGGCC
TCGGCATCCTATTTGCAGCCATCTTCCAGTGCTGGCCGATAACATACGTC
TGGGATACAACCATTGAAGGAGGATCGTGCTTCAATCAACTGGCCTTCTA
CCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTCCTTCTGATCA
TGCCATTGCCATATGTCTGGAAATTACATACGCGAAAAGGACAGAAGTTG
GCTTTAACGGGAGTATTCCTCCTCGGCAGTTTAGGAGCTGTAGCCAGTAT
CTCGCGAATGACGATTTTCTTTCAAGAAAATGCCACGACCGACCCAACCT
GTACGTCCTTTCTCTCCACATACCTCAACGAACTCCCACCCGGGCTAACC
ACATCAACTCAGGGACATCCACCAACCTAGATGAATGCACGATCAGATTC
CGATGTCCCATACAACGGTGATGCGCTGATAGGCGTGTCCGTTGCGATTG
CCGTTGTCCAGATTGTGGTGGTTGTAGCACGTTTCTATACGAGACGCCTG
CAACAGCTGGCTTTAGCTCTCGACGATTACCTGATTCTTCTGGCATTGAT
CGCCAGCTTGGGCCAATCGGCTTTGTACATCATCTTGGTTAAGCTCGCAG
GAGTCGGACATCACATGGAATATGTCGAAGAGACGCCTGAAAAGCTGGTG
ATCCTGGAGAAGGGCCTGTATGCCAACGAGATTCTCGACTTCCCGTTCAC
AGTCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACCTCCGAATCTTCA
CCACCCGATCGTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTC
GGACATGGCCTCGGCATCCTATTTGCAGCCATCTTCCAGTGCTGGCCGAT
AACATACGTCTGGGATACAACCATTGAAGGAGGATCGTGCTTCAATCAAC
TGGCCTTCTACCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTC
CTTCTGATCATGCCATTGCCATATGTCTGGAAATTACATACGCGAAAAGG
ACAGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCAGTTTAGGAGCTG
TAGCCAGTATCTCGCGAATGACGATTTTCTTTCAAGAAAATGCCACGACC
GACCCAACCTGTACGTCCTTTCTCTCCACATACCTCAACGAACTCCCACC
CGGGCTAACCACATCAACTCAGGGACATCCACCAACCTAGATGAATGCAC
GATCAGATTCCGATGTCCCATACAACGGTGATGCGCTGATAGGCGTGTCC
GTTGCGATTGCCGTTGTCCAGATTGTGGTGGTTGTAGCACGTTTCTATAC
GAGACGCCTGCAACAGCTGGCTTTAGCTCTCGACGATTACCTGATTCTTC
TGGCATTGATCGCCAGCTTGGGCCAATCGGCTTTGTACATCATCTTGGTT
AAGCTCGCAGGAGTCGGACATCACATGGAATATGTCGAAGAGACGCCTGA
AAAGCTGGTGATCCTGGAGAAGGGCCTGTATGCCAACGAGATTCTCGACT
TCCCGTTCACAGTCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACCTC
CGAATCTTCACCACCCGATCGTTCAAAAACATGGCATATATAGTCGGTGC
TATCGTGCTCGGACATGGCCTCGGCATCCTATTTGCAGCCATCTTCCAGT
GCTGGCCGATAACATACGTCTGGGATACAACCATTGAAGGAGGATCGTGC
TTCAATCAACTGGCCTTCTACCGCTATGTGTCGCCGCCCAATATCTTGAC
AGACGTCCTCCTTCTGATCATGCCATTGCCATATGTCTGGAAATTACATA
CGCGAAAAGGACAGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCAGT
TTAGGAGCTGTAGCCAGTATCTCGCGAATGACGATTTTCTTTCAAGAAAA
TGCCACGACCGACCCAACCTGTACGTCCTTTCTCTCCACATACCTCAACG
AACTCCCACCCGGGCTAACCACATCAACTCAGGGACATCCACCAACCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007046-T1.utr5p1 | KJC3_007046-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007046-T1.utr3p1 | KJC3_007046-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1301106..1303131 + |
|
