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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1311564..1313035- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007050-T1 ID=KJC3_007050-T1|Name=KJC3_007050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1472bp|location=Sequence derived from alignment at ch5:1311564..1313035- (Aspergillus niger KJC3)
ATTTTCTCTCTCCACAATTGACTTTTCCCCATCCAATCCACACACACCCA
ACAGCAGCCAAAAAGAATAGTTTTGATTATGATTACTTACTTTATGCTAA
GCTAAACCAACTAAACTTAATTCAACTAACCCAAAACCATCAGCTTACCC
AAATCATTATAAGAAGTTGACTAACCACCACCACATCTTCCCCATCCCCC
ATTCCATACCATCGTAGCACCTTCTATATCATTCGCGCTGCCCTCGCAGA
CAACCTTATAAAAGGCCGCTCACAGGACCACATGAAACTCCTCGTTTCGT
TTTTCATCGCTATCATCGCTATTGTCTTGACTTGCAATACATCTACTTTC
ACTAGATACTTTACATCTACCACCAACACCAACACCAACACCACGAACAC
AACCATCACACCCAACAACACACATACTACAAACCTCACCAACATGTCCT
TCCCCCGCGCCATCCGCCAAGCCTTCCTGGCCATCGAACAAGCCGAAGGC
GCCGGCGCCCGCGTCCGCCGCTCCATCGGCACACGCAACCTCCGCAACTT
CAGCCCCTTCCTCATGCTAGACCACTTCACCATCGGCAAAGGCGCCGGTT
TCCCGGACCACCCGCACCGAGGCCAAGAAACCATCACATACCTCCTCTCA
GGCGGAGTCGACCATGAAGACTTCGCCGGAAACCGAGGCACCATTGGCCC
TGGCGATCTCCAATTCATGACCGCCGGACGAGGCATCATGCACGCGGAGA
TGCCGCACGAGAATCCGGACGGCAGTCCCAACGTCGGCATGCAGCTCTGG
GTGGACCTGCCCAAGGAGCTGAAGATGTGCGAGCCGCGGTACCGCGATCT
GCGGGCGTCGGAGATCCCCATTGCCACAGCGGATGACGGGCGCGTCACGG
TGAAGGTCATCTCTGGGCAGTCGCATGGAGTTGATTCGGTACGGGATCTG
GCGTACACGCCTGTTTGGCTGTTGGATGTGACGGTGAAGCCTGGGGGCCG
TGTGAAGCAGGTGCTCCCCGTGGGGTGGAACGCGTTTGCGTATACGTTGG
CCGGAAAGACAATTTTCGGGTCCGGCGGGGAGACGAAGACCATTAAGGAG
TTTCATAATGTGGTGTTTGAGCAGAAGGGCGATTTCGTCGAGGCGTCGGT
TCCCGAGAATGCGGATGAGGAAGGAAGGTTCCTTTTGGTGGCGGGGCAGC
CGTTGGATCAGAAGGTCGTGCAGTATGGCCCGTTCGTGGTCACCAGTGAG
CAGGAGGTGTATCAGGCGATGGTGGACTTCCAGACTGCGTCGAATGGGTT
TGAGAAGTCCAGGAATTGGGAGAGTGAGATTGGGAAGCGCATGGCTTATT
AGTTTCGGTTGATGTGTTAACTTCGTACTACTAGATGAGTTTTGTATAGC
TGTATTGGCGTTTGGTTTGAGTTTTGTGAATGTGTATATAGATCACTTAA
TACCATCATGAGTGATGAGTCC back to topCoding sequence (CDS) from alignment at ch5:1311564..1313035- >KJC3_007050-T1 ID=KJC3_007050-T1|Name=KJC3_007050-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch5:1311564..1313035- (Aspergillus niger KJC3)
ATGAAACTCCTCGTTTCGTTTTTCATCGCTATCATCGCTATTGTCTTGAC
TTGCAATACATCTACTTTCACTAGATACTTTACATCTACCACCAACACCA
ACACCAACACCACGAACACAACCATCACACCCAACAACACACATACTACA
AACCTCACCAACATGTCCTTCCCCCGCGCCATCCGCCAAGCCTTCCTGGC
CATCGAACAAGCCGAAGGCGCCGGCGCCCGCGTCCGCCGCTCCATCGGCA
CACGCAACCTCCGCAACTTCAGCCCCTTCCTCATGCTAGACCACTTCACC
ATCGGCAAAGGCGCCGGTTTCCCGGACCACCCGCACCGAGGCCAAGAAAC
CATCACATACCTCCTCTCAGGCGGAGTCGACCATGAAGACTTCGCCGGAA
ACCGAGGCACCATTGGCCCTGGCGATCTCCAATTCATGACCGCCGGACGA
GGCATCATGCACGCGGAGATGCCGCACGAGAATCCGGACGGCAGTCCCAA
CGTCGGCATGCAGCTCTGGGTGGACCTGCCCAAGGAGCTGAAGATGTGCG
AGCCGCGGTACCGCGATCTGCGGGCGTCGGAGATCCCCATTGCCACAGCG
GATGACGGGCGCGTCACGGTGAAGGTCATCTCTGGGCAGTCGCATGGAGT
TGATTCGGTACGGGATCTGGCGTACACGCCTGTTTGGCTGTTGGATGTGA
CGGTGAAGCCTGGGGGCCGTGTGAAGCAGGTGCTCCCCGTGGGGTGGAAC
GCGTTTGCGTATACGTTGGCCGGAAAGACAATTTTCGGGTCCGGCGGGGA
GACGAAGACCATTAAGGAGTTTCATAATGTGGTGTTTGAGCAGAAGGGCG
ATTTCGTCGAGGCGTCGGTTCCCGAGAATGCGGATGAGGAAGGAAGGTTC
CTTTTGGTGGCGGGGCAGCCGTTGGATCAGAAGGTCGTGCAGTATGGCCC
GTTCGTGGTCACCAGTGAGCAGGAGGTGTATCAGGCGATGGTGGACTTCC
AGACTGCGTCGAATGGGTTTGAGAAGTCCAGGAATTGGGAGAGTGAGATT
GGGAAGCGCATGGCTTATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007050-T1.utr3p1 | KJC3_007050-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007050-T1.utr5p1 | KJC3_007050-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR003829 |
| DBxref | InterPro:IPR008778 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR012093 |
| DBxref | PFAM:PF05726 |
| DBxref | PFAM:PF02678 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1311564..1313035 - |
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