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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1370427..1372466- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007067-T1 ID=KJC3_007067-T1|Name=KJC3_007067-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2040bp|location=Sequence derived from alignment at ch5:1370427..1372466- (Aspergillus niger KJC3)
ATGGCGCCCCTCGACGACGTCCAGGTGGGTGACCTGGTCAATGTCCCCGG
GGGTATGTTTGGGACTGTCAAATATCTGGGAAGTGTTGCGGGCAAGCCAG
GAAAGTTTGCAGGCATTGAGCTAGCGCCGGAGCATGCCAGACGAGGGAAA
AACAATGGAGATGTCGAGGGCAGGAGATACTTCTCTACATCCGTGCCCGG
CTCAGGGATCTTTGTGCCCATGAACAACAACAAATACGTCACCAAGCGCT
CGTCCGGTCCGGCCTCGACGGTGAGCACCGGCCCTCCAACCCCCTCCCGA
CCGGTCAATTTCAGCAAGTCCGTTGGCCCTGGTCCCGCAATGCGCCCACC
ACGCGTCCGACGCCCTTCCCTTCCCCGCCCTGAATCTCCTAGAGGACCAC
CGCCGTCCAAGCTCACCTTGACCGGGCTTCGCACGCCCTCTTCGGCCTCC
CGCGCGGCCCCCTCCAGCACCTACCCACGCAGTCCTATCAAAGCCCCGTC
GCGCGCCTCTGATCGCCCTCCCTCGCGGGTCAGCCGAGTGAGCACTGAAG
ATGATGGCCCCGCATCTAGAGTATCCGAAGTTCAGCAATCGGCAATGGCA
GCAGAGGTGCAAGAGCTGAAGGATCACATCAAGAGCCTAGAGAACCAACT
CCTCGACCGAGACAAGCAGCTGGACGAGCAAGCACATACCCTGTCCGACT
TCCAGAGAACCCTGGAGGAGCTGGAAGGGTCAGATTCGCTTTCCATCCGG
GCTCAGTTGCGTGAAAGGAACGAGAGGATTGCTCAGTTGACGGCTGAGTT
TGATTTGCATCGCGCCGATTTCCGAAGCACCTTGGATACGTTGGAGATCG
CTGCTTCCGAGACGGAGCGAGTCTATGAGCAGCGGCTGGACGAATTGATG
CAACAAAATCGAGAGCTTCAGGATCGCGGAGAGGATGTCGAGGCGGTTGC
GCGACAGCTTAAGCAATTGGAAGAATTGGTCTCGGAGCTAGAAGAGGGTC
TGGAGGACGCCCGGCGCGGTGAGGCTGAAGCTAGGGCGGAAGTTGAATTC
TTGCGCGGAGAAGTCGAGCGGACAAAGCTCGAGCTACAGAAGGAGCGGGA
TTCCAAGGACTCCCACGTAGCTGGGGATGGGCCACTATACTCGAAAGAAC
TTGAGCAGAAGGATGATGAAATCCGTGGCCTAAAAGCAATTATCCACTCC
TTGAGCCGGGGCGACCCAGATTTGCATGCACTGCAACAGAATGGATTTGG
GACGAGCCCGCCGAACCATGACCCCGACCATGTGGCTCATTTAGAACAAC
GTGTCGAGGAATTTGAGCGCATCTCCGAACGGAAGACATACCGTATCGAA
GAACTAGAACGCGAGCTCCAGCAGTTGCAGCTGAATGGTGACGCTCACGC
TCACGCTCACGCTCCCGGCTCCGCGGTCTCTTCATCGCCCAACCACCAAA
AGTCTCCCAGTGTGAATGGGAAGCTTACGAACGGCCATGGAATCAACCAT
GCGCATCGGCTTTCGGATCGCACAGTCGTTCCCAACGACTGGCAAGATTT
ACCTCCGCATGAGGGACAATATCAGGCCTACTCTACCCGCCACCGCGGTA
TTTCGGATGCTTCTCATCATCGTCTGGAGACCATGCACGAGTCAGACGGT
CGCTCAGAGGACGGCGGCTCACTGTGGTGCGAGATCTGTGAGACCGGAGG
GCACGATATCCTGACCTGCACCAACATGTTCGGCGCGGAGAGTAAGAAGG
CCCCCGATGCTACTGAGGCACCCCATGACGACAGCTCTGTGGATGAAAAG
CCAACTCCAGAGGAATCCATGGGTGAACCATCTACATCCTCACATGAAGA
GGACGCGACTCCTCAGAAGACGGGTCGTGATGTTGTGATGGAGGGACTCA
GAGGAGCGAACCTGTCGTCTTCTTCCTCAACCATGGGCCCTGTTGGCGGA
AAGGAAAGCGGCGTCGTTGACGAGTCTAAGTGGTGTGCTCTCTGTGAGAG
AGACGGCCACGAGAGCATCGACTGTCCATTTGATGATTGA back to topCoding sequence (CDS) from alignment at ch5:1370427..1372466- >KJC3_007067-T1 ID=KJC3_007067-T1|Name=KJC3_007067-T1|organism=Aspergillus niger KJC3|type=CDS|length=2040bp|location=Sequence derived from alignment at ch5:1370427..1372466- (Aspergillus niger KJC3)
ATGGCGCCCCTCGACGACGTCCAGGTGGGTGACCTGGTCAATGTCCCCGG
GGGTATGTTTGGGACTGTCAAATATCTGGGAAGTGTTGCGGGCAAGCCAG
GAAAGTTTGCAGGCATTGAGCTAGCGCCGGAGCATGCCAGACGAGGGAAA
AACAATGGAGATGTCGAGGGCAGGAGATACTTCTCTACATCCGTGCCCGG
CTCAGGGATCTTTGTGCCCATGAACAACAACAAATACGTCACCAAGCGCT
CGTCCGGTCCGGCCTCGACGGTGAGCACCGGCCCTCCAACCCCCTCCCGA
CCGGTCAATTTCAGCAAGTCCGTTGGCCCTGGTCCCGCAATGCGCCCACC
ACGCGTCCGACGCCCTTCCCTTCCCCGCCCTGAATCTCCTAGAGGACCAC
CGCCGTCCAAGCTCACCTTGACCGGGCTTCGCACGCCCTCTTCGGCCTCC
CGCGCGGCCCCCTCCAGCACCTACCCACGCAGTCCTATCAAAGCCCCGTC
GCGCGCCTCTGATCGCCCTCCCTCGCGGGTCAGCCGAGTGAGCACTGAAG
ATGATGGCCCCGCATCTAGAGTATCCGAAGTTCAGCAATCGGCAATGGCA
GCAGAGGTGCAAGAGCTGAAGGATCACATCAAGAGCCTAGAGAACCAACT
CCTCGACCGAGACAAGCAGCTGGACGAGCAAGCACATACCCTGTCCGACT
TCCAGAGAACCCTGGAGGAGCTGGAAGGGTCAGATTCGCTTTCCATCCGG
GCTCAGTTGCGTGAAAGGAACGAGAGGATTGCTCAGTTGACGGCTGAGTT
TGATTTGCATCGCGCCGATTTCCGAAGCACCTTGGATACGTTGGAGATCG
CTGCTTCCGAGACGGAGCGAGTCTATGAGCAGCGGCTGGACGAATTGATG
CAACAAAATCGAGAGCTTCAGGATCGCGGAGAGGATGTCGAGGCGGTTGC
GCGACAGCTTAAGCAATTGGAAGAATTGGTCTCGGAGCTAGAAGAGGGTC
TGGAGGACGCCCGGCGCGGTGAGGCTGAAGCTAGGGCGGAAGTTGAATTC
TTGCGCGGAGAAGTCGAGCGGACAAAGCTCGAGCTACAGAAGGAGCGGGA
TTCCAAGGACTCCCACGTAGCTGGGGATGGGCCACTATACTCGAAAGAAC
TTGAGCAGAAGGATGATGAAATCCGTGGCCTAAAAGCAATTATCCACTCC
TTGAGCCGGGGCGACCCAGATTTGCATGCACTGCAACAGAATGGATTTGG
GACGAGCCCGCCGAACCATGACCCCGACCATGTGGCTCATTTAGAACAAC
GTGTCGAGGAATTTGAGCGCATCTCCGAACGGAAGACATACCGTATCGAA
GAACTAGAACGCGAGCTCCAGCAGTTGCAGCTGAATGGTGACGCTCACGC
TCACGCTCACGCTCCCGGCTCCGCGGTCTCTTCATCGCCCAACCACCAAA
AGTCTCCCAGTGTGAATGGGAAGCTTACGAACGGCCATGGAATCAACCAT
GCGCATCGGCTTTCGGATCGCACAGTCGTTCCCAACGACTGGCAAGATTT
ACCTCCGCATGAGGGACAATATCAGGCCTACTCTACCCGCCACCGCGGTA
TTTCGGATGCTTCTCATCATCGTCTGGAGACCATGCACGAGTCAGACGGT
CGCTCAGAGGACGGCGGCTCACTGTGGTGCGAGATCTGTGAGACCGGAGG
GCACGATATCCTGACCTGCACCAACATGTTCGGCGCGGAGAGTAAGAAGG
CCCCCGATGCTACTGAGGCACCCCATGACGACAGCTCTGTGGATGAAAAG
CCAACTCCAGAGGAATCCATGGGTGAACCATCTACATCCTCACATGAAGA
GGACGCGACTCCTCAGAAGACGGGTCGTGATGTTGTGATGGAGGGACTCA
GAGGAGCGAACCTGTCGTCTTCTTCCTCAACCATGGGCCCTGTTGGCGGA
AAGGAAAGCGGCGTCGTTGACGAGTCTAAGTGGTGTGCTCTCTGTGAGAG
AGACGGCCACGAGAGCATCGACTGTCCATTTGATGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036859 |
| DBxref | InterPro:IPR032108 |
| DBxref | InterPro:IPR000938 |
| DBxref | PFAM:PF16641 |
| DBxref | PFAM:PF01302 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1370427..1372466 - |
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