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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1438945..1441126- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007096-T1 ID=KJC3_007096-T1|Name=KJC3_007096-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2182bp|location=Sequence derived from alignment at ch5:1438945..1441126- (Aspergillus niger KJC3)
GATCATCTCACCCGCACATCCCACCCTGCCGGCTTGCATGCTGCTATTTT
GATTTGCAAATTGCCCTCCATACTGCTTCGTGGCCGACCTTGCTGGGTCA
CCATCTACGAACTTGAAGGAAGCCGTTGTCTGACATCCGCGGACGCCTGC
GCCTCGAAGACCCGCTTGTTCTCCACTTTTCCTCTACCTGTGCGGCGTTA
TCGCACTTGATTGACTGCATTTCAACATCAGGAGTCTCGTGGATACTCGA
CTACACTGCCGGAGACTACGGACAGGACAAGCCTCTCCTTTCGACTCGCT
ACTGGTCCCATCCATCGTTCTATAATACCTCGCGTGTCAGTAGCCGAAAG
CCGCACGGAGCTGACGACATGGAGTACATGCAATCAGACCCTTTCTATGG
GGCTGTTCCAGCCCAAAGTGCTGGGTCAGTCACTGGCGCCGGGGGTGTGG
ATTTGGAGTCATTGAACGGAAATGTAGCAGGTCCTATGGTGAAAGTAGAT
GGTATGCTGCCTCTATCGGATTAATTCAAAGGAATGGCAATGAATAACCC
TCATCTTCCAGATCCGCCCAAGTTTGAACTCGAGTCATATATTGCGAACT
ACACCGGTATGGTTATGCCTTTGATCACAGGCGCTTCGTGCTGTGGCTAA
CCCGCTCCTTACTTCTAGGCCGGACCAGATTTAATCGACTGTTCCTCATA
GGCACATGCTCCACTTATCTCTCTGTCGAAGCATTGAAGGCTGCAGTTGC
AGAAGCCAAAGGCGGCAGGGATGTTTCGAGATACGAAAACGCTGTTCGGG
CACTTGCCGAAGTTGCACCTAGTGACCCAGAGGCAACTCTTGATAAAAAT
TGGGTGGATCATATGAAGAAGTCTGTCAAGGCGGAAACAGATCGGCTAGA
GCACGAGCTTAGAGGTTATAAGAACAACTTGATCAAAGAGAGCATAAGGG
TACGTTACAACGTATTTGGCAGGGCGACAAACTCTTTCTAATTGCTTTAT
AGATGGGCAACGAAGACCTCGGGCAACATTACAATCAGATAGGCGACCTC
GTGTCGGCTTCCAAAGCATATTCTCGTATGAGGGACTATTGCACTACACC
AACCCACATTGCGTCGATGCTGTTCAAAATTATTAATGTTGCAATTGAGC
GCGGCGACTGGCTTAGTGTGCAGTCGAATGTGCACCGGCTACGCAACCTG
CAATCGAAGCCAGAGGAGCAAGCCAAAAACCAGCCCAAGATGTCTGCTGC
GCTGGGTCTCTCCCAGCTACACTCCGGCGCATACGTGGATGCTGCCAACA
GCTTCTTGGCCACCGAGCCGAGCTTAGGGGACTCTTACAACGAAGTGCTC
ACCTCGAATGATGTTGCAGTATACGGTGGGCTTTGCGCCCTGGCATCAAT
GGACCGGAATGAGCTACAACGTCGCGTGCTCGACAACAGCTCGTTCCGCA
ACTTCCTTGAGCTGGAGCCGCACATCCGCCGGGCGATCTCATTCTTCTGC
AACTCTAAATTCCGAGCCTGTCTCGAAATCCTAGAAGCCTACAAGGTCGA
CTACCTTCTCGACGTCCATCTACAGCGCCACGTCAAGACACTATTCACCC
GCATCCGCACCAAGTCTATCCAACAATATCTCGTTCCATTCAGCCGCGTG
ACCCTCGAATCCATGACGAAAATGTTCGCTCCGGGAGTCATAGGCGGCCA
AGCCGACCCCACGGACTCCAGCTCGCCCTTTGTGCAGGAACTCATCGAAC
TAATTCAGGATGGTACTCTAGACGCGCGCATCGACTTGGAAAAGAAGGTG
CTGGTCTCTAACCAGGTCAACCTGCGTACTGACGTCCAGCAGTCCATCCT
GGACAGCCTGGATAACTACATCCGCGAAGCACATATTCGCGTTCTGCGGA
CCAACATTATCCAGGCTGGACTGGAGGTCCGCGCAGATGAGCGACGACCG
AAAGACGACCGGGGAAAGGGTGGGGAGGCATTTGGCAATTTCCTTCCTCG
TGGTCCGGGGGTCATGTAATGCTAGCCAGCCAGTCGGCCAGTAAATGAGA
TACGACAAAGATTATCAAAGTACCATTAGCCACGAAATTCCTCGTCTTGT
ACGACAACCTCGAATGGTTCACGTAAGGATGTACATCAACGTTATTTATT
TCTTACCTTGTCAATAAGAGGAAACCTAGCAG back to topCoding sequence (CDS) from alignment at ch5:1438945..1441126- >KJC3_007096-T1 ID=KJC3_007096-T1|Name=KJC3_007096-T1|organism=Aspergillus niger KJC3|type=CDS|length=5904bp|location=Sequence derived from alignment at ch5:1438945..1441126- (Aspergillus niger KJC3)
ATGGGCAACGAAGACCTCGGGCAACATTACAATCAGATAGGCGACCTCGT
GTCGGCTTCCAAAGCATATTCTCGTATGAGGGACTATTGCACTACACCAA
CCCACATTGCGTCGATGCTGTTCAAAATTATTAATGTTGCAATTGAGCGC
GGCGACTGGCTTAGTGTGCAGTCGAATGTGCACCGGCTACGCAACCTGCA
ATCGAAGCCAGAGGAGCAAGCCAAAAACCAGCCCAAGATGTCTGCTGCGC
TGGGTCTCTCCCAGCTACACTCCGGCGCATACGTGGATGCTGCCAACAGC
TTCTTGGCCACCGAGCCGAGCTTAGGGGACTCTTACAACGAAGTGCTCAC
CTCGAATGATGTTGCAGTATACGGTGGGCTTTGCGCCCTGGCATCAATGG
ACCGGAATGAGCTACAACGTCGCGTGCTCGACAACAGCTCGTTCCGCAAC
TTCCTTGAGCTGGAGCCGCACATCCGCCGGGCGATCTCATTCTTCTGCAA
CTCTAAATTCCGAGCCTGTCTCGAAATCCTAGAAGCCTACAAGGTCGACT
ACCTTCTCGACGTCCATCTACAGCGCCACGTCAAGACACTATTCACCCGC
ATCCGCACCAAGTCTATCCAACAATATCTCGTTCCATTCAGCCGCGTGAC
CCTCGAATCCATGACGAAAATGTTCGCTCCGGGAGTCATAGGCGGCCAAG
CCGACCCCACGGACTCCAGCTCGCCCTTTGTGCAGGAACTCATCGAACTA
ATTCAGGATGGTACTCTAGACGCGCGCATCGACTTGGAAAAGAAGGTGCT
GGTCTCTAACCAGGTCAACCTGCGTACTGACGTCCAGCAGTCCATCCTGG
ACAGCCTGGATAACTACATCCGCGAAGCACATATTCGCGTTCTGCGGACC
AACATTATCCAGGCTGGACTGGAGGTCCGCGCAGATGAGCGACGACCGAA
AGACGACCGGGGAAAGGGTGGGGAGGCATTTGGCAATTTCCTTCCTCGTG
GTCCGGGGGTCATGTAAGCCGGACCAGATTTAATCGACTGTTCCTCATAG
GCACATGCTCCACTTATCTCTCTGTCGAAGCATTGAAGGCTGCAGTTGCA
GAAGCCAAAGGCGGCAGGGATGTTTCGAGATACGAAAACGCTGTTCGGGC
ACTTGCCGAAGTTGCACCTAGTGACCCAGAGGCAACTCTTGATAAAAATT
GGGTGGATCATATGAAGAAGTCTGTCAAGGCGGAAACAGATCGGCTAGAG
CACGAGCTTAGAGGTTATAAGAACAACTTGATCAAAGAGAGCATAAGGAT
CCGCCCAAGTTTGAACTCGAGTCATATATTGCGAACTACACCGATGGAGT
ACATGCAATCAGACCCTTTCTATGGGGCTGTTCCAGCCCAAAGTGCTGGG
TCAGTCACTGGCGCCGGGGGTGTGGATTTGGAGTCATTGAACGGAAATGT
AGCAGGTCCTATGGTGAAAGTAGATGATGGGCAACGAAGACCTCGGGCAA
CATTACAATCAGATAGGCGACCTCGTGTCGGCTTCCAAAGCATATTCTCG
TATGAGGGACTATTGCACTACACCAACCCACATTGCGTCGATGCTGTTCA
AAATTATTAATGTTGCAATTGAGCGCGGCGACTGGCTTAGTGTGCAGTCG
AATGTGCACCGGCTACGCAACCTGCAATCGAAGCCAGAGGAGCAAGCCAA
AAACCAGCCCAAGATGTCTGCTGCGCTGGGTCTCTCCCAGCTACACTCCG
GCGCATACGTGGATGCTGCCAACAGCTTCTTGGCCACCGAGCCGAGCTTA
GGGGACTCTTACAACGAAGTGCTCACCTCGAATGATGTTGCAGTATACGG
TGGGCTTTGCGCCCTGGCATCAATGGACCGGAATGAGCTACAACGTCGCG
TGCTCGACAACAGCTCGTTCCGCAACTTCCTTGAGCTGGAGCCGCACATC
CGCCGGGCGATCTCATTCTTCTGCAACTCTAAATTCCGAGCCTGTCTCGA
AATCCTAGAAGCCTACAAGGTCGACTACCTTCTCGACGTCCATCTACAGC
GCCACGTCAAGACACTATTCACCCGCATCCGCACCAAGTCTATCCAACAA
TATCTCGTTCCATTCAGCCGCGTGACCCTCGAATCCATGACGAAAATGTT
CGCTCCGGGAGTCATAGGCGGCCAAGCCGACCCCACGGACTCCAGCTCGC
CCTTTGTGCAGGAACTCATCGAACTAATTCAGGATGGTACTCTAGACGCG
CGCATCGACTTGGAAAAGAAGGTGCTGGTCTCTAACCAGGTCAACCTGCG
TACTGACGTCCAGCAGTCCATCCTGGACAGCCTGGATAACTACATCCGCG
AAGCACATATTCGCGTTCTGCGGACCAACATTATCCAGGCTGGACTGGAG
GTCCGCGCAGATGAGCGACGACCGAAAGACGACCGGGGAAAGGGTGGGGA
GGCATTTGGCAATTTCCTTCCTCGTGGTCCGGGGGTCATGTAAGCCGGAC
CAGATTTAATCGACTGTTCCTCATAGGCACATGCTCCACTTATCTCTCTG
TCGAAGCATTGAAGGCTGCAGTTGCAGAAGCCAAAGGCGGCAGGGATGTT
TCGAGATACGAAAACGCTGTTCGGGCACTTGCCGAAGTTGCACCTAGTGA
CCCAGAGGCAACTCTTGATAAAAATTGGGTGGATCATATGAAGAAGTCTG
TCAAGGCGGAAACAGATCGGCTAGAGCACGAGCTTAGAGGTTATAAGAAC
AACTTGATCAAAGAGAGCATAAGGATCCGCCCAAGTTTGAACTCGAGTCA
TATATTGCGAACTACACCGATGGAGTACATGCAATCAGACCCTTTCTATG
GGGCTGTTCCAGCCCAAAGTGCTGGGTCAGTCACTGGCGCCGGGGGTGTG
GATTTGGAGTCATTGAACGGAAATGTAGCAGGTCCTATGGTGAAAGTAGA
TGATGGGCAACGAAGACCTCGGGCAACATTACAATCAGATAGGCGACCTC
GTGTCGGCTTCCAAAGCATATTCTCGTATGAGGGACTATTGCACTACACC
AACCCACATTGCGTCGATGCTGTTCAAAATTATTAATGTTGCAATTGAGC
GCGGCGACTGGCTTAGTGTGCAGTCGAATGTGCACCGGCTACGCAACCTG
CAATCGAAGCCAGAGGAGCAAGCCAAAAACCAGCCCAAGATGTCTGCTGC
GCTGGGTCTCTCCCAGCTACACTCCGGCGCATACGTGGATGCTGCCAACA
GCTTCTTGGCCACCGAGCCGAGCTTAGGGGACTCTTACAACGAAGTGCTC
ACCTCGAATGATGTTGCAGTATACGGTGGGCTTTGCGCCCTGGCATCAAT
GGACCGGAATGAGCTACAACGTCGCGTGCTCGACAACAGCTCGTTCCGCA
ACTTCCTTGAGCTGGAGCCGCACATCCGCCGGGCGATCTCATTCTTCTGC
AACTCTAAATTCCGAGCCTGTCTCGAAATCCTAGAAGCCTACAAGGTCGA
CTACCTTCTCGACGTCCATCTACAGCGCCACGTCAAGACACTATTCACCC
GCATCCGCACCAAGTCTATCCAACAATATCTCGTTCCATTCAGCCGCGTG
ACCCTCGAATCCATGACGAAAATGTTCGCTCCGGGAGTCATAGGCGGCCA
AGCCGACCCCACGGACTCCAGCTCGCCCTTTGTGCAGGAACTCATCGAAC
TAATTCAGGATGGTACTCTAGACGCGCGCATCGACTTGGAAAAGAAGGTG
CTGGTCTCTAACCAGGTCAACCTGCGTACTGACGTCCAGCAGTCCATCCT
GGACAGCCTGGATAACTACATCCGCGAAGCACATATTCGCGTTCTGCGGA
CCAACATTATCCAGGCTGGACTGGAGGTCCGCGCAGATGAGCGACGACCG
AAAGACGACCGGGGAAAGGGTGGGGAGGCATTTGGCAATTTCCTTCCTCG
TGGTCCGGGGGTCATGTAAGCCGGACCAGATTTAATCGACTGTTCCTCAT
AGGCACATGCTCCACTTATCTCTCTGTCGAAGCATTGAAGGCTGCAGTTG
CAGAAGCCAAAGGCGGCAGGGATGTTTCGAGATACGAAAACGCTGTTCGG
GCACTTGCCGAAGTTGCACCTAGTGACCCAGAGGCAACTCTTGATAAAAA
TTGGGTGGATCATATGAAGAAGTCTGTCAAGGCGGAAACAGATCGGCTAG
AGCACGAGCTTAGAGGTTATAAGAACAACTTGATCAAAGAGAGCATAAGG
ATCCGCCCAAGTTTGAACTCGAGTCATATATTGCGAACTACACCGATGGA
GTACATGCAATCAGACCCTTTCTATGGGGCTGTTCCAGCCCAAAGTGCTG
GGTCAGTCACTGGCGCCGGGGGTGTGGATTTGGAGTCATTGAACGGAAAT
GTAGCAGGTCCTATGGTGAAAGTAGATGATGGGCAACGAAGACCTCGGGC
AACATTACAATCAGATAGGCGACCTCGTGTCGGCTTCCAAAGCATATTCT
CGTATGAGGGACTATTGCACTACACCAACCCACATTGCGTCGATGCTGTT
CAAAATTATTAATGTTGCAATTGAGCGCGGCGACTGGCTTAGTGTGCAGT
CGAATGTGCACCGGCTACGCAACCTGCAATCGAAGCCAGAGGAGCAAGCC
AAAAACCAGCCCAAGATGTCTGCTGCGCTGGGTCTCTCCCAGCTACACTC
CGGCGCATACGTGGATGCTGCCAACAGCTTCTTGGCCACCGAGCCGAGCT
TAGGGGACTCTTACAACGAAGTGCTCACCTCGAATGATGTTGCAGTATAC
GGTGGGCTTTGCGCCCTGGCATCAATGGACCGGAATGAGCTACAACGTCG
CGTGCTCGACAACAGCTCGTTCCGCAACTTCCTTGAGCTGGAGCCGCACA
TCCGCCGGGCGATCTCATTCTTCTGCAACTCTAAATTCCGAGCCTGTCTC
GAAATCCTAGAAGCCTACAAGGTCGACTACCTTCTCGACGTCCATCTACA
GCGCCACGTCAAGACACTATTCACCCGCATCCGCACCAAGTCTATCCAAC
AATATCTCGTTCCATTCAGCCGCGTGACCCTCGAATCCATGACGAAAATG
TTCGCTCCGGGAGTCATAGGCGGCCAAGCCGACCCCACGGACTCCAGCTC
GCCCTTTGTGCAGGAACTCATCGAACTAATTCAGGATGGTACTCTAGACG
CGCGCATCGACTTGGAAAAGAAGGTGCTGGTCTCTAACCAGGTCAACCTG
CGTACTGACGTCCAGCAGTCCATCCTGGACAGCCTGGATAACTACATCCG
CGAAGCACATATTCGCGTTCTGCGGACCAACATTATCCAGGCTGGACTGG
AGGTCCGCGCAGATGAGCGACGACCGAAAGACGACCGGGGAAAGGGTGGG
GAGGCATTTGGCAATTTCCTTCCTCGTGGTCCGGGGGTCATGTAAGCCGG
ACCAGATTTAATCGACTGTTCCTCATAGGCACATGCTCCACTTATCTCTC
TGTCGAAGCATTGAAGGCTGCAGTTGCAGAAGCCAAAGGCGGCAGGGATG
TTTCGAGATACGAAAACGCTGTTCGGGCACTTGCCGAAGTTGCACCTAGT
GACCCAGAGGCAACTCTTGATAAAAATTGGGTGGATCATATGAAGAAGTC
TGTCAAGGCGGAAACAGATCGGCTAGAGCACGAGCTTAGAGGTTATAAGA
ACAACTTGATCAAAGAGAGCATAAGGATCCGCCCAAGTTTGAACTCGAGT
CATATATTGCGAACTACACCGATGGAGTACATGCAATCAGACCCTTTCTA
TGGGGCTGTTCCAGCCCAAAGTGCTGGGTCAGTCACTGGCGCCGGGGGTG
TGGATTTGGAGTCATTGAACGGAAATGTAGCAGGTCCTATGGTGAAAGTA
GATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007096-T1.utr3p1 | KJC3_007096-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007096-T1.utr5p1 | KJC3_007096-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR019585 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF10602 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1438945..1441126 - |
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