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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1590806..1594049+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007152-T1 ID=KJC3_007152-T1|Name=KJC3_007152-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3244bp|location=Sequence derived from alignment at ch5:1590806..1594049+ (Aspergillus niger KJC3)
GTGGTGGCTCCAGCACGACGGTTTTGGTGGTTACTATGCAATTTGATATG
ATGCATCAACAAGCCAACACTGCGGTGGAGTATCTGGGCTGTGCCCTGCA
GGGCTGACGAAAGTCATCCGCTGACGACAAACTTCAATATTCTTATTATA
AAATCCGTCTTCTTTCTTCTACTGGAACATGAAACCCCTACGAAGCAACT
GCGGCCGTGGTTGTTGGAGAGGAACAATGAGGGACGCTCTTTCACTTGCC
GGGAATTCATCATTCAGGACATTAACCAGGGGTGTCGTGTGGAGCATCTA
CGACAACCAGCGCCATCAATTCACAACGCTCGTCCAGCAGCATCAAACCA
ATCAGCCAGGCGCAGTTGCTCGAGTCTTTATGTGTGACATGACAAGATGA
AGAAATTGCCGCCGCGGAGGCCAAGACGCAAGCCAAACCACGGTTTGGCT
GTGATTTGAGGAACGATAAAAATAACCATGACAGGCAATCCGTCATCAAA
CAAAGTTCACAGCCTCAACTCAGCGCCTGTGCCCTGCCACCATCCTTGTA
TAAGGCTGAAGAGTCTGTTATTTCAAGACTTGATCCCCTCTCACAGACTG
TCTTCTCCGAGTCCTCTCCTCATCATCTTCTCCCCATCTTTCTTTACGGT
TGTGGCGCTGAGTCTCCACCCTCCGCGATAAGCCGCCGCGAAACGATGCC
GCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACACGGCGGACC
ACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAATGTGCCTCAG
ATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTATCCGTCCGCC
TGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATATTTAGAACCCG
TTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTCGCTCG
CGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCGCGCGG
AGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTCGCGGA
ACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGATCGAC
TGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAGAGGGC
CACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCTGTCGC
CTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGTCGCGG
AGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATGTGAGTGGTCA
GATTGCGTGACCTCAATGCATGCATCTAACTGTGGCATAGATCAATGTAC
AGGAGGCGATCCGACTTCATGAAGCTGGAGGTATGGACATAACTTGGAGA
TTGGCTGTCCGCTTGCTTAGTTGCTTACACCTGGATTACAGAACTCGAAC
GGTCGACAAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCAACAAT
GCACTCAGTCAAGTGCTCTATGGGCTAGCACTCCGGTAAGTAGCAACCGT
ACCTTTGTTGAGCTTCGTTTACGCCCGACTCCTATCGTGGGCTGCACATT
TGGTGGACACTATTGCTACATGATACTGATTTGGGCTTGATATAGACATG
GTTGGGGCTGCTCGCCAGATCCTGATAGAGCCGTCATGTATCTCTCGGCC
GCAGCGTCCAACTCGGCATCGATAGAGTCCCAGGCGCTCCAGGCCGGCAT
CAAGAAGGGCGGATCTGCCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGC
TGGGAAACTGCTTCCGTAACGGCTGGGGTGTCAAGAAGGACCCAGTCGCA
GCGCGACAATACTTCGAAACGGCAGCCAATCTGGGCGATACCGATGCGAT
GAACGAGGTTGCTTGGTGCTACCTAGAAGGGTTTGGAGGGAAAAAGGACA
AGGTTAGTGTAGTTTGCGTAATGGACCGTTCGTGATGATTATCTCGACAT
GACCTGCCCGTGTCCCGAGGGCCTCGCAGCTCGGGCATCAATGCTTGAAG
CCCGCATCACTCTTTGGATCCAGCGGTGCTATCTGATCATCTGTCGGAGC
AGTTGACTGACTCGCAACCACCATGTTTTAGTTCACGGCCGCCAAATACT
ACCGATTGGCCGAAGAGAAAGGCAACAAATTAGTGGGAAATTCCTGGTGC
GTTAAATTGTCCCTTTTCAGCGTTGCATTTTCATTGTTTGATGCCCATTT
CTGGATCCTCCACGGGGCCAGTGTGACGAGCATTGCCTCAGACCCCAGCG
CTCTGCATCCGGCTCTCCTCACTTGCAGGTGTTGTTGCGGGATGCATTGA
TAGGCGCTCGGAGTTTCCGCTTCCCTGCGCCATGCAAACCAGCGTCACGC
TCTCCGCCAACCAGAGCCCCATTTCCCCCCATCAGCGGGTTTCTCGAGTT
TAGGCTGACATGATCTTGTTCAACGACAGGATATGGAAGGACAAGTACAA
CCCGCACTGAGCCGTTAGGGCTGTGTACCTGCTGTTTCTACTTTCTCTAC
GACCTTTCACCCGCACCGTCCCATCAGATGACGATGGCGTTTTGGACCGA
GCTGAAGCAAGGCTAGAATGCTTCCACTTTCTTAGTCGGCTTCTTGCGGC
CAGACGCCCTTGTCCTTCCCAGTTCGTATCCAGGCTTTGGGACACGGGCC
CCCTTACTTACTACCGTTGCCGATTAATTTTCTTCCATTCTTCGCTACCA
TCACCATGAAGGGAACGGCAGCGATGATGACCCAAACCTCCAGCCTCATC
TTTCTTCCTTACTGACACCCAATCTCAAAGCGTATTTTTGCTTGCTTCCC
TTCCCCCGGATGTTCATACTACTTCCTTTCTTGGACTTTTCTTCTTCTGA
TGTTACATACATGCATACATACCCACTCAGTCTGTGTCACAGCACAGAAA
AAATAATCGCTATCATTATACCGATACCCACACACCCTCTTCTGTCCTCC
CAGGACCCACAAAGTACCTTGCATTGAGTAACGTGTATGTGCATAGCATA
GCGTCGCTTCGCATCATGTTGTTTGCGTTCGCCCGGCTTGCATGGTCGCA
GCTATATCCTTTACGGAATACCCTAGTCTCACCTGTCACGTTGCATATGT
AACTACAAGGTAGAATGCTACTAGCGTAGGTAAATTGGTAGGAAGATACG
TAGTACTGTTTACTGCCTGAACTATATGCATTAATCAATCAGTA back to topCoding sequence (CDS) from alignment at ch5:1590806..1594049+ >KJC3_007152-T1 ID=KJC3_007152-T1|Name=KJC3_007152-T1|organism=Aspergillus niger KJC3|type=CDS|length=6786bp|location=Sequence derived from alignment at ch5:1590806..1594049+ (Aspergillus niger KJC3)
ATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACACGGC
GGACCACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAATGTGC
CTCAGATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTATCCGT
CCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATATTTAGA
ACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTC
GCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCG
CGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTC
GCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGA
TCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAG
AGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCT
GTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGT
CGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATATCAAT
GTACAGGAGGCGATCCGACTTCATGAAGCTGGAGAACTCGAACGGTCGAC
AAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCAACAATGCACTCA
GTCAAGTGCTCTATGGGCTAGCACTCCGACATGGTTGGGGCTGCTCGCCA
GATCCTGATAGAGCCGTCATGTATCTCTCGGCCGCAGCGTCCAACTCGGC
ATCGATAGAGTCCCAGGCGCTCCAGGCCGGCATCAAGAAGGGCGGATCTG
CCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGCTGGGAAACTGCTTCCGT
AACGGCTGGGGTGTCAAGAAGGACCCAGTCGCAGCGCGACAATACTTCGA
AACGGCAGCCAATCTGGGCGATACCGATGCGATGAACGAGGTTGCTTGGT
GCTACCTAGAAGGGTTTGGAGGGAAAAAGGACAAGTTCACGGCCGCCAAA
TACTACCGATTGGCCGAAGAGAAAGGCAACAAATTAGTGGGAAATTCCTG
GATATGGAAGGACAAGTACAACCCGCACTGAATGCCGCTCCGCGAGATAC
TTCACAAGAAGGACGCCCTCAACAACACGGCGGACCACTATGCGTCTAAC
GCCGTTCCCACGACATCCGGGAGGAATGTGCCTCAGATCACCTTTATCCG
AACCGACACAACCTCACAAGAAGTTATCCGTCCGCCTGTCTTCGACGGAG
ATGCCGATCACCCCGACGATCGATATTTAGAACCCGTTCCTCCCTCTCCT
TCGCATCGCATTTCGTTGAATCCGTTCCGTCGCTCGCGTGCGCCCTCAGA
GTCCTCGGGTGCAAACTCACCAACGCGCCCGCGCGGAGAAAGACGGCTGA
CGCACCTGCTGCACTTGGATCGCTCGGGGTCGCGGAACTCCAGCTCGTCA
TCAGTCAACGTCCCATCCGACCTTCCGCAGATCGACTGTGATAGAGGCGA
TGAGCAAGAAAGGGAGGCACAATGGGAGAAGAGGGCCACTGTACTGGCGC
AGCGCAGCCCGCAGGCCGGAGCTTCGTGCCTGTCGCCTACTTCACCGACA
GGCTTCGGACTGGATGGCGCCCCATCGAGGTCGCGGAGTTCTAGTCGGAG
CCGGATAAACGATCCAGAAGGGGATATCAATGTACAGGAGGCGATCCGAC
TTCATGAAGCTGGAGAACTCGAACGGTCGACAAAGATGTTTGAGCACCTG
GCGGATCCTAACGGTGCCAACAATGCACTCAGTCAAGTGCTCTATGGGCT
AGCACTCCGACATGGTTGGGGCTGCTCGCCAGATCCTGATAGAGCCGTCA
TGTATCTCTCGGCCGCAGCGTCCAACTCGGCATCGATAGAGTCCCAGGCG
CTCCAGGCCGGCATCAAGAAGGGCGGATCTGCCAAGGGAGAGCTAGTGTT
GGCTATTTTTGAGCTGGGAAACTGCTTCCGTAACGGCTGGGGTGTCAAGA
AGGACCCAGTCGCAGCGCGACAATACTTCGAAACGGCAGCCAATCTGGGC
GATACCGATGCGATGAACGAGGTTGCTTGGTGCTACCTAGAAGGGTTTGG
AGGGAAAAAGGACAAGTTCACGGCCGCCAAATACTACCGATTGGCCGAAG
AGAAAGGCAACAAATTAGTGGGAAATTCCTGGATATGGAAGGACAAGTAC
AACCCGCACTGAATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCT
CAACAACACGGCGGACCACTATGCGTCTAACGCCGTTCCCACGACATCCG
GGAGGAATGTGCCTCAGATCACCTTTATCCGAACCGACACAACCTCACAA
GAAGTTATCCGTCCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGA
TCGATATTTAGAACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGA
ATCCGTTCCGTCGCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCA
CCAACGCGCCCGCGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGA
TCGCTCGGGGTCGCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCG
ACCTTCCGCAGATCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCA
CAATGGGAGAAGAGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGG
AGCTTCGTGCCTGTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCG
CCCCATCGAGGTCGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAA
GGGGATATCAATGTACAGGAGGCGATCCGACTTCATGAAGCTGGAGAACT
CGAACGGTCGACAAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCA
ACAATGCACTCAGTCAAGTGCTCTATGGGCTAGCACTCCGACATGGTTGG
GGCTGCTCGCCAGATCCTGATAGAGCCGTCATGTATCTCTCGGCCGCAGC
GTCCAACTCGGCATCGATAGAGTCCCAGGCGCTCCAGGCCGGCATCAAGA
AGGGCGGATCTGCCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGCTGGGA
AACTGCTTCCGTAACGGCTGGGGTGTCAAGAAGGACCCAGTCGCAGCGCG
ACAATACTTCGAAACGGCAGCCAATCTGGGCGATACCGATGCGATGAACG
AGGTTGCTTGGTGCTACCTAGAAGGGTTTGGAGGGAAAAAGGACAAGTTC
ACGGCCGCCAAATACTACCGATTGGCCGAAGAGAAAGGCAACAAATTAGT
GGGAAATTCCTGGATATGGAAGGACAAGTACAACCCGCACTGAATGCCGC
TCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACACGGCGGACCAC
TATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAATGTGCCTCAGAT
CACCTTTATCCGAACCGACACAACCTCACAAGAAGTTATCCGTCCGCCTG
TCTTCGACGGAGATGCCGATCACCCCGACGATCGATATTTAGAACCCGTT
CCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTCGCTCGCG
TGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCGCGCGGAG
AAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTCGCGGAAC
TCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGATCGACTG
TGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAGAGGGCCA
CTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCTGTCGCCT
ACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGTCGCGGAG
TTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATATCAATGTACAGG
AGGCGATCCGACTTCATGAAGCTGGAGAACTCGAACGGTCGACAAAGATG
TTTGAGCACCTGGCGGATCCTAACGGTGCCAACAATGCACTCAGTCAAGT
GCTCTATGGGCTAGCACTCCGACATGGTTGGGGCTGCTCGCCAGATCCTG
ATAGAGCCGTCATGTATCTCTCGGCCGCAGCGTCCAACTCGGCATCGATA
GAGTCCCAGGCGCTCCAGGCCGGCATCAAGAAGGGCGGATCTGCCAAGGG
AGAGCTAGTGTTGGCTATTTTTGAGCTGGGAAACTGCTTCCGTAACGGCT
GGGGTGTCAAGAAGGACCCAGTCGCAGCGCGACAATACTTCGAAACGGCA
GCCAATCTGGGCGATACCGATGCGATGAACGAGGTTGCTTGGTGCTACCT
AGAAGGGTTTGGAGGGAAAAAGGACAAGTTCACGGCCGCCAAATACTACC
GATTGGCCGAAGAGAAAGGCAACAAATTAGTGGGAAATTCCTGGATATGG
AAGGACAAGTACAACCCGCACTGAATGCCGCTCCGCGAGATACTTCACAA
GAAGGACGCCCTCAACAACACGGCGGACCACTATGCGTCTAACGCCGTTC
CCACGACATCCGGGAGGAATGTGCCTCAGATCACCTTTATCCGAACCGAC
ACAACCTCACAAGAAGTTATCCGTCCGCCTGTCTTCGACGGAGATGCCGA
TCACCCCGACGATCGATATTTAGAACCCGTTCCTCCCTCTCCTTCGCATC
GCATTTCGTTGAATCCGTTCCGTCGCTCGCGTGCGCCCTCAGAGTCCTCG
GGTGCAAACTCACCAACGCGCCCGCGCGGAGAAAGACGGCTGACGCACCT
GCTGCACTTGGATCGCTCGGGGTCGCGGAACTCCAGCTCGTCATCAGTCA
ACGTCCCATCCGACCTTCCGCAGATCGACTGTGATAGAGGCGATGAGCAA
GAAAGGGAGGCACAATGGGAGAAGAGGGCCACTGTACTGGCGCAGCGCAG
CCCGCAGGCCGGAGCTTCGTGCCTGTCGCCTACTTCACCGACAGGCTTCG
GACTGGATGGCGCCCCATCGAGGTCGCGGAGTTCTAGTCGGAGCCGGATA
AACGATCCAGAAGGGGATATCAATGTACAGGAGGCGATCCGACTTCATGA
AGCTGGAGAACTCGAACGGTCGACAAAGATGTTTGAGCACCTGGCGGATC
CTAACGGTGCCAACAATGCACTCAGTCAAGTGCTCTATGGGCTAGCACTC
CGACATGGTTGGGGCTGCTCGCCAGATCCTGATAGAGCCGTCATGTATCT
CTCGGCCGCAGCGTCCAACTCGGCATCGATAGAGTCCCAGGCGCTCCAGG
CCGGCATCAAGAAGGGCGGATCTGCCAAGGGAGAGCTAGTGTTGGCTATT
TTTGAGCTGGGAAACTGCTTCCGTAACGGCTGGGGTGTCAAGAAGGACCC
AGTCGCAGCGCGACAATACTTCGAAACGGCAGCCAATCTGGGCGATACCG
ATGCGATGAACGAGGTTGCTTGGTGCTACCTAGAAGGGTTTGGAGGGAAA
AAGGACAAGTTCACGGCCGCCAAATACTACCGATTGGCCGAAGAGAAAGG
CAACAAATTAGTGGGAAATTCCTGGATATGGAAGGACAAGTACAACCCGC
ACTGAATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAAC
ACGGCGGACCACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAA
TGTGCCTCAGATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTA
TCCGTCCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATAT
TTAGAACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTT
CCGTCGCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGC
GCCCGCGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCG
GGGTCGCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCC
GCAGATCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGG
AGAAGAGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCG
TGCCTGTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATC
GAGGTCGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATA
TCAATGTACAGGAGGCGATCCGACTTCATGAAGCTGGAGAACTCGAACGG
TCGACAAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCAACAATGC
ACTCAGTCAAGTGCTCTATGGGCTAGCACTCCGACATGGTTGGGGCTGCT
CGCCAGATCCTGATAGAGCCGTCATGTATCTCTCGGCCGCAGCGTCCAAC
TCGGCATCGATAGAGTCCCAGGCGCTCCAGGCCGGCATCAAGAAGGGCGG
ATCTGCCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGCTGGGAAACTGCT
TCCGTAACGGCTGGGGTGTCAAGAAGGACCCAGTCGCAGCGCGACAATAC
TTCGAAACGGCAGCCAATCTGGGCGATACCGATGCGATGAACGAGGTTGC
TTGGTGCTACCTAGAAGGGTTTGGAGGGAAAAAGGACAAGTTCACGGCCG
CCAAATACTACCGATTGGCCGAAGAGAAAGGCAACAAATTAGTGGGAAAT
TCCTGGATATGGAAGGACAAGTACAACCCGCACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007152-T1.utr5p1 | KJC3_007152-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007152-T1.utr3p1 | KJC3_007152-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR006597 |
| DBxref | PFAM:PF08238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1590806..1594049 + |
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