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KJC3_007154-T1, KJC3_007154-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007154-T1
Unique NameKJC3_007154-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1602843..1606392-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007154-T1 ID=KJC3_007154-T1|Name=KJC3_007154-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3550bp|location=Sequence derived from alignment at ch5:1602843..1606392- (Aspergillus niger KJC3)
AATCAATATACTGAACTTCAAACTCTCTTCGCGAGAGGTTTCTGTCTGAT
CACAAGAGACCTCGATTTTACCTTTACCCCCCTCCTCCTTCATATTATAC
TTATTCCGCTTCTTTTCCTCCCCTACTCCTCTTCTGCCTCCACTTCGCTA
GTTACTCTACTACACCTTGACCACCACCCGATCGATCTACTTCTCTTCTC
ACCTTATCTTATTTTTACACTCCCCATTCCTCCTCCCTTGAGACTTTTTC
GAGAACATACTCTCTCGTTTTTCTTCTCACGGGTTATATCTTCAATCCTC
CCATTCTGCACACTTGAGACTTCTGAATACTCTCACCAACCACCCCAAAA
CCCCGCACCTCTTGACCTGTTTTTTTTCCCGAACCTCTATTTTACACACC
GCCTCTTGACTGCTCTACAAGCACCACAGGCTTTTTTCCTTGATCAAAGC
CACCTTTTTTCATCTTTATCTTCGTCATATACACATTCACAGTTATGGCA
AGGTATTCTCAACAATCCTTTGACTTCTACCAACAATCCCCCTCTACATT
GGATGCCAAACCGTCATATTCAGAAGAAGACGACATGAGTGTACTTGATG
ATAAGATCCTCGATTCTACTTCCCCCGAACTTCCTTCCACTGTTGCCGAC
CACCGGAGAACCTCATATGACCATGCACCCGATGCATTTGCGCATCGAGA
TTCCGTCTGGTCTGATTTCTCCCAATCCGTTTCTAGCACACAGTCCCGTC
ACAACTCCCAAGTCGGCCACGCTTTCTTTGAAACCGCCCCCAATCCTTTT
ATGCGGGTAGACGGCGCTCATCCATCCGCTCCATACGGCCACCAGGCTTC
CTGGCAGCTTGCAAAGGAATCGGGCTCCTGCACTCCTACCGCCATGTACG
ATCACTTTCCCTCCGAGTTGGATCACGCTTCGTCAGCCCCCTTTGCTGGC
GGTGCCGTCGGTCCTGTCAGCACCATCAACATCCCTTCTATGTCCTACCG
TCCCGGCATGGCCTTTGCGCACCCTGCCACTGTGGCTATGTCGCCGCAGT
CCAGTCAGGGCTGGATGCCCGCTGCAACGGATCTGCCTGATGCCATGTCG
CGGCCAACCAAGAGCCCGACCTACCGCAACAGTTCCCCCTTGAGTGTGCG
CCGGGATGGGATCCGGAAGAAGAACGCTCGCTTTGAGATTCCTGCAGAAC
GGACGTTGAGCAACATCGACCAGCTGATCAGCCAGTCGACCAATGAGGAG
GAGATCAAAGAACTCAAACAGCAGAAGCGGCTGCTGAGGAACCGTCAAGC
TGCGTAAGTACCCACTGCCTTCCCCCTCCCCCCTTACATGGATGACATCA
GCCCATATCTAACCTTGTCCTCTAGTTTGGATTCCCGTCAGCGCAAGAAG
CTCCACACCGAGAAATTGGAAGAGGAGAAGAAGCAGTTCACCCAGGTCAT
CAGCGACCTCGAGGAAGAACTGCAGAACATGCGCCTACGGGAGGCCGAAC
TCCTTCGCGAGAAGAGCGAATGGATGGCCGCCCAACAGGAAATCACCCAG
TACATCAACACCATGCACATGGAGAAGGATGAACTGATCCGGGTGCACAC
CTTGGAGTCTGCTGATCTTCGAAAGAAGAACAACATTCTCAAGGAGACCG
TGGAGAAGCTTGAGAGACACGCACGAACCGCCGCCCCTGCGATGACCACC
GAGTTCTCGGACTTCGAGAACTTGACCATGGACAGCAGTCCCTGGGAAGA
CTTTACTATGGTGAACAGCCTCTCCCTTGACGCTGAGTCTGTTCCCACTT
CGACGGCACACTCTTCCTCGTTGGTGGTCTCCACGAACGACAAGGAGAAG
TCTGCGACCAGCGACTACCCCTTCAGCTGGAACGCCTTTTACATGTGCCT
TCTGTTTGGAGCATTCATTGCCTCCAACAGCTCTACGCTGTCGGCTCGCT
CCATGCCTCAGCTCTCGGAGGAGTATCGCGCCGAGTCCGCGAATGTCCTC
CGGGCTGTACTGTCTTCCTCTCCGCCTGAGCTTGCTCAGGGCCAAGGCGC
TGTGGCCTCCTCGTCGGCCATGCCCATGCCTACCACCATCACTGGAGCCG
AGATGGCTCAGATGACCGGCACAGCGGCACCGTCGAACTTGGATGAACTC
CACAACACTCTGGCCATGCCCTCCAAGCAGCAGGAACAGGAGCAGGTTTT
CGCTCTCAACGCGGACCAGTACAACTCCTTGACGACTTTTGATGATGCGG
GTGTCGACTACAAGCAGCAGCAGCAGCCTTCTAATCTGCAGCAGGCGCTC
GCTGCGATGCGTGGTAACGTTGCCCACAAGCTTCCGAACAAGGCTACCTC
TGAAGTCTACTCTCGCTCCCTAATGTGGGACCGAGTTCCTGAAAAGGTAA
TCCGAGACTTCAGACGCATGGTTCAGGAATATGGTGTCGCCCCCGTAAAG
GAGGAAGACTCCGGCTTCAGCCAGTAGTTTAGCCCCGTGATGGTTGGGTC
ACGCCGACCGTACATCGCCCATCTCAGCTCTCTCCTCTCTCTTCTCTCTC
TCTCCACCGTGCCCAGACAAAGTTACATTGCCTGCGTTTCTTCTGCATCC
AAACAAGCAAACTGATCGAGTTCTGTGCTTCCACCTCCGCCTCCTTTACG
TCGTCTACAGTTAGACAGACGTACACCTTCTCTCTACATGCTTTAACGAC
ATACGACTGTTGGCCAGTTTTAGCCAGATTTAGCCATATACATACATAGA
CAGCTTACCATTCACTTCAACTGGATATATCTTACGGACTAGCTTCATGA
TGACCTCGTCTGACAATTTAGCGATGTTGTTCTACGTTTTGCACTCCTTC
GGCTTTATCGGCGTACCAGCGTTTTCTCCTTCTCCGAGTTGAGTGTGGAT
TTCTCGAGCAACTGAAATATGTTGCAGTCGTTTACATCTACCTCCACACC
TCCTCGTCGATTTTCATGACTTTCTTTCACGGATGGCATCTTTTGACTTT
TTCACCATGGGACATTGCCTGCGCGTCGCAGGCAGTCCAACGGAACAACG
GGACGGAACATATCGAGCGCTTGCTTACATTTTGCATATGACTTGGATTC
GGGTTTTTGTTTTCTTGCTCTTGAATCGTCGTGGTTTTTGATCTTCTTTT
AGTTTTGCGTGCATCGCGTGGGGAATAGGTTGGGCTGCAGTGGCATTTGC
TATGATTGTTATGATATGATTGACATGTTTTATGATTTGGGATGTGGGAT
GCCTGTTAATGTCTATGTTGCGATGATGATTCGATCTGGGTCTGCTGAGA
AGCCATACTGGATGGCTCTGCAACCTACCACTCGTTTACTTTCTTTTGTC
AGATACTTGACAAATGCCCGTGCATGTGTGCATGTGGCATGACACAGATG
ATCTTGGGCTTGTCCCGTCCACTCTTTTGAAAGAACTATATTTCGTTTGT
CATCTGTGGATCACCCTTTTGTACTGTATATAGTATTGGGCAGCAATGTT
CTAAGGAGTTTGGTCAGACACATGGAATAAAAGTCTTTCCGGTCTCGGAC
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Coding sequence (CDS) from alignment at ch5:1602843..1606392-

>KJC3_007154-T1 ID=KJC3_007154-T1|Name=KJC3_007154-T1|organism=Aspergillus niger KJC3|type=CDS|length=3822bp|location=Sequence derived from alignment at ch5:1602843..1606392- (Aspergillus niger KJC3)
TTTGGATTCCCGTCAGCGCAAGAAGCTCCACACCGAGAAATTGGAAGAGG
AGAAGAAGCAGTTCACCCAGGTCATCAGCGACCTCGAGGAAGAACTGCAG
AACATGCGCCTACGGGAGGCCGAACTCCTTCGCGAGAAGAGCGAATGGAT
GGCCGCCCAACAGGAAATCACCCAGTACATCAACACCATGCACATGGAGA
AGGATGAACTGATCCGGGTGCACACCTTGGAGTCTGCTGATCTTCGAAAG
AAGAACAACATTCTCAAGGAGACCGTGGAGAAGCTTGAGAGACACGCACG
AACCGCCGCCCCTGCGATGACCACCGAGTTCTCGGACTTCGAGAACTTGA
CCATGGACAGCAGTCCCTGGGAAGACTTTACTATGGTGAACAGCCTCTCC
CTTGACGCTGAGTCTGTTCCCACTTCGACGGCACACTCTTCCTCGTTGGT
GGTCTCCACGAACGACAAGGAGAAGTCTGCGACCAGCGACTACCCCTTCA
GCTGGAACGCCTTTTACATGTGCCTTCTGTTTGGAGCATTCATTGCCTCC
AACAGCTCTACGCTGTCGGCTCGCTCCATGCCTCAGCTCTCGGAGGAGTA
TCGCGCCGAGTCCGCGAATGTCCTCCGGGCTGTACTGTCTTCCTCTCCGC
CTGAGCTTGCTCAGGGCCAAGGCGCTGTGGCCTCCTCGTCGGCCATGCCC
ATGCCTACCACCATCACTGGAGCCGAGATGGCTCAGATGACCGGCACAGC
GGCACCGTCGAACTTGGATGAACTCCACAACACTCTGGCCATGCCCTCCA
AGCAGCAGGAACAGGAGCAGGTTTTCGCTCTCAACGCGGACCAGTACAAC
TCCTTGACGACTTTTGATGATGCGGGTGTCGACTACAAGCAGCAGCAGCA
GCCTTCTAATCTGCAGCAGGCGCTCGCTGCGATGCGTGGTAACGTTGCCC
ACAAGCTTCCGAACAAGGCTACCTCTGAAGTCTACTCTCGCTCCCTAATG
TGGGACCGAGTTCCTGAAAAGGTAATCCGAGACTTCAGACGCATGGTTCA
GGAATATGGTGTCGCCCCCGTAAAGGAGGAAGACTCCGGCTTCAGCCAGT
AGATGGCAAGGTATTCTCAACAATCCTTTGACTTCTACCAACAATCCCCC
TCTACATTGGATGCCAAACCGTCATATTCAGAAGAAGACGACATGAGTGT
ACTTGATGATAAGATCCTCGATTCTACTTCCCCCGAACTTCCTTCCACTG
TTGCCGACCACCGGAGAACCTCATATGACCATGCACCCGATGCATTTGCG
CATCGAGATTCCGTCTGGTCTGATTTCTCCCAATCCGTTTCTAGCACACA
GTCCCGTCACAACTCCCAAGTCGGCCACGCTTTCTTTGAAACCGCCCCCA
ATCCTTTTATGCGGGTAGACGGCGCTCATCCATCCGCTCCATACGGCCAC
CAGGCTTCCTGGCAGCTTGCAAAGGAATCGGGCTCCTGCACTCCTACCGC
CATGTACGATCACTTTCCCTCCGAGTTGGATCACGCTTCGTCAGCCCCCT
TTGCTGGCGGTGCCGTCGGTCCTGTCAGCACCATCAACATCCCTTCTATG
TCCTACCGTCCCGGCATGGCCTTTGCGCACCCTGCCACTGTGGCTATGTC
GCCGCAGTCCAGTCAGGGCTGGATGCCCGCTGCAACGGATCTGCCTGATG
CCATGTCGCGGCCAACCAAGAGCCCGACCTACCGCAACAGTTCCCCCTTG
AGTGTGCGCCGGGATGGGATCCGGAAGAAGAACGCTCGCTTTGAGATTCC
TGCAGAACGGACGTTGAGCAACATCGACCAGCTGATCAGCCAGTCGACCA
ATGAGGAGGAGATCAAAGAACTCAAACAGCAGAAGCGGCTGCTGAGGAAC
CGTCAAGCTGCTTTGGATTCCCGTCAGCGCAAGAAGCTCCACACCGAGAA
ATTGGAAGAGGAGAAGAAGCAGTTCACCCAGGTCATCAGCGACCTCGAGG
AAGAACTGCAGAACATGCGCCTACGGGAGGCCGAACTCCTTCGCGAGAAG
AGCGAATGGATGGCCGCCCAACAGGAAATCACCCAGTACATCAACACCAT
GCACATGGAGAAGGATGAACTGATCCGGGTGCACACCTTGGAGTCTGCTG
ATCTTCGAAAGAAGAACAACATTCTCAAGGAGACCGTGGAGAAGCTTGAG
AGACACGCACGAACCGCCGCCCCTGCGATGACCACCGAGTTCTCGGACTT
CGAGAACTTGACCATGGACAGCAGTCCCTGGGAAGACTTTACTATGGTGA
ACAGCCTCTCCCTTGACGCTGAGTCTGTTCCCACTTCGACGGCACACTCT
TCCTCGTTGGTGGTCTCCACGAACGACAAGGAGAAGTCTGCGACCAGCGA
CTACCCCTTCAGCTGGAACGCCTTTTACATGTGCCTTCTGTTTGGAGCAT
TCATTGCCTCCAACAGCTCTACGCTGTCGGCTCGCTCCATGCCTCAGCTC
TCGGAGGAGTATCGCGCCGAGTCCGCGAATGTCCTCCGGGCTGTACTGTC
TTCCTCTCCGCCTGAGCTTGCTCAGGGCCAAGGCGCTGTGGCCTCCTCGT
CGGCCATGCCCATGCCTACCACCATCACTGGAGCCGAGATGGCTCAGATG
ACCGGCACAGCGGCACCGTCGAACTTGGATGAACTCCACAACACTCTGGC
CATGCCCTCCAAGCAGCAGGAACAGGAGCAGGTTTTCGCTCTCAACGCGG
ACCAGTACAACTCCTTGACGACTTTTGATGATGCGGGTGTCGACTACAAG
CAGCAGCAGCAGCCTTCTAATCTGCAGCAGGCGCTCGCTGCGATGCGTGG
TAACGTTGCCCACAAGCTTCCGAACAAGGCTACCTCTGAAGTCTACTCTC
GCTCCCTAATGTGGGACCGAGTTCCTGAAAAGGTAATCCGAGACTTCAGA
CGCATGGTTCAGGAATATGGTGTCGCCCCCGTAAAGGAGGAAGACTCCGG
CTTCAGCCAGTAGATGGCAAGGTATTCTCAACAATCCTTTGACTTCTACC
AACAATCCCCCTCTACATTGGATGCCAAACCGTCATATTCAGAAGAAGAC
GACATGAGTGTACTTGATGATAAGATCCTCGATTCTACTTCCCCCGAACT
TCCTTCCACTGTTGCCGACCACCGGAGAACCTCATATGACCATGCACCCG
ATGCATTTGCGCATCGAGATTCCGTCTGGTCTGATTTCTCCCAATCCGTT
TCTAGCACACAGTCCCGTCACAACTCCCAAGTCGGCCACGCTTTCTTTGA
AACCGCCCCCAATCCTTTTATGCGGGTAGACGGCGCTCATCCATCCGCTC
CATACGGCCACCAGGCTTCCTGGCAGCTTGCAAAGGAATCGGGCTCCTGC
ACTCCTACCGCCATGTACGATCACTTTCCCTCCGAGTTGGATCACGCTTC
GTCAGCCCCCTTTGCTGGCGGTGCCGTCGGTCCTGTCAGCACCATCAACA
TCCCTTCTATGTCCTACCGTCCCGGCATGGCCTTTGCGCACCCTGCCACT
GTGGCTATGTCGCCGCAGTCCAGTCAGGGCTGGATGCCCGCTGCAACGGA
TCTGCCTGATGCCATGTCGCGGCCAACCAAGAGCCCGACCTACCGCAACA
GTTCCCCCTTGAGTGTGCGCCGGGATGGGATCCGGAAGAAGAACGCTCGC
TTTGAGATTCCTGCAGAACGGACGTTGAGCAACATCGACCAGCTGATCAG
CCAGTCGACCAATGAGGAGGAGATCAAAGAACTCAAACAGCAGAAGCGGC
TGCTGAGGAACCGTCAAGCTGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007154KJC3_007154Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007154-T1KJC3_007154-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007154-T1.cdsKJC3_007154-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007154-T1.utr3p1KJC3_007154-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007154-T1.exon2KJC3_007154-T1.exon2Aspergillus niger KJC3exon
KJC3_007154-T1.exon1KJC3_007154-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007154-T1.utr5p1KJC3_007154-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF03131
DBxrefPFAM:PF07716
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1602843..1606392 -
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