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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1602843..1606392- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007154-T1 ID=KJC3_007154-T1|Name=KJC3_007154-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3550bp|location=Sequence derived from alignment at ch5:1602843..1606392- (Aspergillus niger KJC3)
AATCAATATACTGAACTTCAAACTCTCTTCGCGAGAGGTTTCTGTCTGAT
CACAAGAGACCTCGATTTTACCTTTACCCCCCTCCTCCTTCATATTATAC
TTATTCCGCTTCTTTTCCTCCCCTACTCCTCTTCTGCCTCCACTTCGCTA
GTTACTCTACTACACCTTGACCACCACCCGATCGATCTACTTCTCTTCTC
ACCTTATCTTATTTTTACACTCCCCATTCCTCCTCCCTTGAGACTTTTTC
GAGAACATACTCTCTCGTTTTTCTTCTCACGGGTTATATCTTCAATCCTC
CCATTCTGCACACTTGAGACTTCTGAATACTCTCACCAACCACCCCAAAA
CCCCGCACCTCTTGACCTGTTTTTTTTCCCGAACCTCTATTTTACACACC
GCCTCTTGACTGCTCTACAAGCACCACAGGCTTTTTTCCTTGATCAAAGC
CACCTTTTTTCATCTTTATCTTCGTCATATACACATTCACAGTTATGGCA
AGGTATTCTCAACAATCCTTTGACTTCTACCAACAATCCCCCTCTACATT
GGATGCCAAACCGTCATATTCAGAAGAAGACGACATGAGTGTACTTGATG
ATAAGATCCTCGATTCTACTTCCCCCGAACTTCCTTCCACTGTTGCCGAC
CACCGGAGAACCTCATATGACCATGCACCCGATGCATTTGCGCATCGAGA
TTCCGTCTGGTCTGATTTCTCCCAATCCGTTTCTAGCACACAGTCCCGTC
ACAACTCCCAAGTCGGCCACGCTTTCTTTGAAACCGCCCCCAATCCTTTT
ATGCGGGTAGACGGCGCTCATCCATCCGCTCCATACGGCCACCAGGCTTC
CTGGCAGCTTGCAAAGGAATCGGGCTCCTGCACTCCTACCGCCATGTACG
ATCACTTTCCCTCCGAGTTGGATCACGCTTCGTCAGCCCCCTTTGCTGGC
GGTGCCGTCGGTCCTGTCAGCACCATCAACATCCCTTCTATGTCCTACCG
TCCCGGCATGGCCTTTGCGCACCCTGCCACTGTGGCTATGTCGCCGCAGT
CCAGTCAGGGCTGGATGCCCGCTGCAACGGATCTGCCTGATGCCATGTCG
CGGCCAACCAAGAGCCCGACCTACCGCAACAGTTCCCCCTTGAGTGTGCG
CCGGGATGGGATCCGGAAGAAGAACGCTCGCTTTGAGATTCCTGCAGAAC
GGACGTTGAGCAACATCGACCAGCTGATCAGCCAGTCGACCAATGAGGAG
GAGATCAAAGAACTCAAACAGCAGAAGCGGCTGCTGAGGAACCGTCAAGC
TGCGTAAGTACCCACTGCCTTCCCCCTCCCCCCTTACATGGATGACATCA
GCCCATATCTAACCTTGTCCTCTAGTTTGGATTCCCGTCAGCGCAAGAAG
CTCCACACCGAGAAATTGGAAGAGGAGAAGAAGCAGTTCACCCAGGTCAT
CAGCGACCTCGAGGAAGAACTGCAGAACATGCGCCTACGGGAGGCCGAAC
TCCTTCGCGAGAAGAGCGAATGGATGGCCGCCCAACAGGAAATCACCCAG
TACATCAACACCATGCACATGGAGAAGGATGAACTGATCCGGGTGCACAC
CTTGGAGTCTGCTGATCTTCGAAAGAAGAACAACATTCTCAAGGAGACCG
TGGAGAAGCTTGAGAGACACGCACGAACCGCCGCCCCTGCGATGACCACC
GAGTTCTCGGACTTCGAGAACTTGACCATGGACAGCAGTCCCTGGGAAGA
CTTTACTATGGTGAACAGCCTCTCCCTTGACGCTGAGTCTGTTCCCACTT
CGACGGCACACTCTTCCTCGTTGGTGGTCTCCACGAACGACAAGGAGAAG
TCTGCGACCAGCGACTACCCCTTCAGCTGGAACGCCTTTTACATGTGCCT
TCTGTTTGGAGCATTCATTGCCTCCAACAGCTCTACGCTGTCGGCTCGCT
CCATGCCTCAGCTCTCGGAGGAGTATCGCGCCGAGTCCGCGAATGTCCTC
CGGGCTGTACTGTCTTCCTCTCCGCCTGAGCTTGCTCAGGGCCAAGGCGC
TGTGGCCTCCTCGTCGGCCATGCCCATGCCTACCACCATCACTGGAGCCG
AGATGGCTCAGATGACCGGCACAGCGGCACCGTCGAACTTGGATGAACTC
CACAACACTCTGGCCATGCCCTCCAAGCAGCAGGAACAGGAGCAGGTTTT
CGCTCTCAACGCGGACCAGTACAACTCCTTGACGACTTTTGATGATGCGG
GTGTCGACTACAAGCAGCAGCAGCAGCCTTCTAATCTGCAGCAGGCGCTC
GCTGCGATGCGTGGTAACGTTGCCCACAAGCTTCCGAACAAGGCTACCTC
TGAAGTCTACTCTCGCTCCCTAATGTGGGACCGAGTTCCTGAAAAGGTAA
TCCGAGACTTCAGACGCATGGTTCAGGAATATGGTGTCGCCCCCGTAAAG
GAGGAAGACTCCGGCTTCAGCCAGTAGTTTAGCCCCGTGATGGTTGGGTC
ACGCCGACCGTACATCGCCCATCTCAGCTCTCTCCTCTCTCTTCTCTCTC
TCTCCACCGTGCCCAGACAAAGTTACATTGCCTGCGTTTCTTCTGCATCC
AAACAAGCAAACTGATCGAGTTCTGTGCTTCCACCTCCGCCTCCTTTACG
TCGTCTACAGTTAGACAGACGTACACCTTCTCTCTACATGCTTTAACGAC
ATACGACTGTTGGCCAGTTTTAGCCAGATTTAGCCATATACATACATAGA
CAGCTTACCATTCACTTCAACTGGATATATCTTACGGACTAGCTTCATGA
TGACCTCGTCTGACAATTTAGCGATGTTGTTCTACGTTTTGCACTCCTTC
GGCTTTATCGGCGTACCAGCGTTTTCTCCTTCTCCGAGTTGAGTGTGGAT
TTCTCGAGCAACTGAAATATGTTGCAGTCGTTTACATCTACCTCCACACC
TCCTCGTCGATTTTCATGACTTTCTTTCACGGATGGCATCTTTTGACTTT
TTCACCATGGGACATTGCCTGCGCGTCGCAGGCAGTCCAACGGAACAACG
GGACGGAACATATCGAGCGCTTGCTTACATTTTGCATATGACTTGGATTC
GGGTTTTTGTTTTCTTGCTCTTGAATCGTCGTGGTTTTTGATCTTCTTTT
AGTTTTGCGTGCATCGCGTGGGGAATAGGTTGGGCTGCAGTGGCATTTGC
TATGATTGTTATGATATGATTGACATGTTTTATGATTTGGGATGTGGGAT
GCCTGTTAATGTCTATGTTGCGATGATGATTCGATCTGGGTCTGCTGAGA
AGCCATACTGGATGGCTCTGCAACCTACCACTCGTTTACTTTCTTTTGTC
AGATACTTGACAAATGCCCGTGCATGTGTGCATGTGGCATGACACAGATG
ATCTTGGGCTTGTCCCGTCCACTCTTTTGAAAGAACTATATTTCGTTTGT
CATCTGTGGATCACCCTTTTGTACTGTATATAGTATTGGGCAGCAATGTT
CTAAGGAGTTTGGTCAGACACATGGAATAAAAGTCTTTCCGGTCTCGGAC
back to topCoding sequence (CDS) from alignment at ch5:1602843..1606392- >KJC3_007154-T1 ID=KJC3_007154-T1|Name=KJC3_007154-T1|organism=Aspergillus niger KJC3|type=CDS|length=3822bp|location=Sequence derived from alignment at ch5:1602843..1606392- (Aspergillus niger KJC3)
TTTGGATTCCCGTCAGCGCAAGAAGCTCCACACCGAGAAATTGGAAGAGG
AGAAGAAGCAGTTCACCCAGGTCATCAGCGACCTCGAGGAAGAACTGCAG
AACATGCGCCTACGGGAGGCCGAACTCCTTCGCGAGAAGAGCGAATGGAT
GGCCGCCCAACAGGAAATCACCCAGTACATCAACACCATGCACATGGAGA
AGGATGAACTGATCCGGGTGCACACCTTGGAGTCTGCTGATCTTCGAAAG
AAGAACAACATTCTCAAGGAGACCGTGGAGAAGCTTGAGAGACACGCACG
AACCGCCGCCCCTGCGATGACCACCGAGTTCTCGGACTTCGAGAACTTGA
CCATGGACAGCAGTCCCTGGGAAGACTTTACTATGGTGAACAGCCTCTCC
CTTGACGCTGAGTCTGTTCCCACTTCGACGGCACACTCTTCCTCGTTGGT
GGTCTCCACGAACGACAAGGAGAAGTCTGCGACCAGCGACTACCCCTTCA
GCTGGAACGCCTTTTACATGTGCCTTCTGTTTGGAGCATTCATTGCCTCC
AACAGCTCTACGCTGTCGGCTCGCTCCATGCCTCAGCTCTCGGAGGAGTA
TCGCGCCGAGTCCGCGAATGTCCTCCGGGCTGTACTGTCTTCCTCTCCGC
CTGAGCTTGCTCAGGGCCAAGGCGCTGTGGCCTCCTCGTCGGCCATGCCC
ATGCCTACCACCATCACTGGAGCCGAGATGGCTCAGATGACCGGCACAGC
GGCACCGTCGAACTTGGATGAACTCCACAACACTCTGGCCATGCCCTCCA
AGCAGCAGGAACAGGAGCAGGTTTTCGCTCTCAACGCGGACCAGTACAAC
TCCTTGACGACTTTTGATGATGCGGGTGTCGACTACAAGCAGCAGCAGCA
GCCTTCTAATCTGCAGCAGGCGCTCGCTGCGATGCGTGGTAACGTTGCCC
ACAAGCTTCCGAACAAGGCTACCTCTGAAGTCTACTCTCGCTCCCTAATG
TGGGACCGAGTTCCTGAAAAGGTAATCCGAGACTTCAGACGCATGGTTCA
GGAATATGGTGTCGCCCCCGTAAAGGAGGAAGACTCCGGCTTCAGCCAGT
AGATGGCAAGGTATTCTCAACAATCCTTTGACTTCTACCAACAATCCCCC
TCTACATTGGATGCCAAACCGTCATATTCAGAAGAAGACGACATGAGTGT
ACTTGATGATAAGATCCTCGATTCTACTTCCCCCGAACTTCCTTCCACTG
TTGCCGACCACCGGAGAACCTCATATGACCATGCACCCGATGCATTTGCG
CATCGAGATTCCGTCTGGTCTGATTTCTCCCAATCCGTTTCTAGCACACA
GTCCCGTCACAACTCCCAAGTCGGCCACGCTTTCTTTGAAACCGCCCCCA
ATCCTTTTATGCGGGTAGACGGCGCTCATCCATCCGCTCCATACGGCCAC
CAGGCTTCCTGGCAGCTTGCAAAGGAATCGGGCTCCTGCACTCCTACCGC
CATGTACGATCACTTTCCCTCCGAGTTGGATCACGCTTCGTCAGCCCCCT
TTGCTGGCGGTGCCGTCGGTCCTGTCAGCACCATCAACATCCCTTCTATG
TCCTACCGTCCCGGCATGGCCTTTGCGCACCCTGCCACTGTGGCTATGTC
GCCGCAGTCCAGTCAGGGCTGGATGCCCGCTGCAACGGATCTGCCTGATG
CCATGTCGCGGCCAACCAAGAGCCCGACCTACCGCAACAGTTCCCCCTTG
AGTGTGCGCCGGGATGGGATCCGGAAGAAGAACGCTCGCTTTGAGATTCC
TGCAGAACGGACGTTGAGCAACATCGACCAGCTGATCAGCCAGTCGACCA
ATGAGGAGGAGATCAAAGAACTCAAACAGCAGAAGCGGCTGCTGAGGAAC
CGTCAAGCTGCTTTGGATTCCCGTCAGCGCAAGAAGCTCCACACCGAGAA
ATTGGAAGAGGAGAAGAAGCAGTTCACCCAGGTCATCAGCGACCTCGAGG
AAGAACTGCAGAACATGCGCCTACGGGAGGCCGAACTCCTTCGCGAGAAG
AGCGAATGGATGGCCGCCCAACAGGAAATCACCCAGTACATCAACACCAT
GCACATGGAGAAGGATGAACTGATCCGGGTGCACACCTTGGAGTCTGCTG
ATCTTCGAAAGAAGAACAACATTCTCAAGGAGACCGTGGAGAAGCTTGAG
AGACACGCACGAACCGCCGCCCCTGCGATGACCACCGAGTTCTCGGACTT
CGAGAACTTGACCATGGACAGCAGTCCCTGGGAAGACTTTACTATGGTGA
ACAGCCTCTCCCTTGACGCTGAGTCTGTTCCCACTTCGACGGCACACTCT
TCCTCGTTGGTGGTCTCCACGAACGACAAGGAGAAGTCTGCGACCAGCGA
CTACCCCTTCAGCTGGAACGCCTTTTACATGTGCCTTCTGTTTGGAGCAT
TCATTGCCTCCAACAGCTCTACGCTGTCGGCTCGCTCCATGCCTCAGCTC
TCGGAGGAGTATCGCGCCGAGTCCGCGAATGTCCTCCGGGCTGTACTGTC
TTCCTCTCCGCCTGAGCTTGCTCAGGGCCAAGGCGCTGTGGCCTCCTCGT
CGGCCATGCCCATGCCTACCACCATCACTGGAGCCGAGATGGCTCAGATG
ACCGGCACAGCGGCACCGTCGAACTTGGATGAACTCCACAACACTCTGGC
CATGCCCTCCAAGCAGCAGGAACAGGAGCAGGTTTTCGCTCTCAACGCGG
ACCAGTACAACTCCTTGACGACTTTTGATGATGCGGGTGTCGACTACAAG
CAGCAGCAGCAGCCTTCTAATCTGCAGCAGGCGCTCGCTGCGATGCGTGG
TAACGTTGCCCACAAGCTTCCGAACAAGGCTACCTCTGAAGTCTACTCTC
GCTCCCTAATGTGGGACCGAGTTCCTGAAAAGGTAATCCGAGACTTCAGA
CGCATGGTTCAGGAATATGGTGTCGCCCCCGTAAAGGAGGAAGACTCCGG
CTTCAGCCAGTAGATGGCAAGGTATTCTCAACAATCCTTTGACTTCTACC
AACAATCCCCCTCTACATTGGATGCCAAACCGTCATATTCAGAAGAAGAC
GACATGAGTGTACTTGATGATAAGATCCTCGATTCTACTTCCCCCGAACT
TCCTTCCACTGTTGCCGACCACCGGAGAACCTCATATGACCATGCACCCG
ATGCATTTGCGCATCGAGATTCCGTCTGGTCTGATTTCTCCCAATCCGTT
TCTAGCACACAGTCCCGTCACAACTCCCAAGTCGGCCACGCTTTCTTTGA
AACCGCCCCCAATCCTTTTATGCGGGTAGACGGCGCTCATCCATCCGCTC
CATACGGCCACCAGGCTTCCTGGCAGCTTGCAAAGGAATCGGGCTCCTGC
ACTCCTACCGCCATGTACGATCACTTTCCCTCCGAGTTGGATCACGCTTC
GTCAGCCCCCTTTGCTGGCGGTGCCGTCGGTCCTGTCAGCACCATCAACA
TCCCTTCTATGTCCTACCGTCCCGGCATGGCCTTTGCGCACCCTGCCACT
GTGGCTATGTCGCCGCAGTCCAGTCAGGGCTGGATGCCCGCTGCAACGGA
TCTGCCTGATGCCATGTCGCGGCCAACCAAGAGCCCGACCTACCGCAACA
GTTCCCCCTTGAGTGTGCGCCGGGATGGGATCCGGAAGAAGAACGCTCGC
TTTGAGATTCCTGCAGAACGGACGTTGAGCAACATCGACCAGCTGATCAG
CCAGTCGACCAATGAGGAGGAGATCAAAGAACTCAAACAGCAGAAGCGGC
TGCTGAGGAACCGTCAAGCTGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007154-T1.utr3p1 | KJC3_007154-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007154-T1.utr5p1 | KJC3_007154-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | PFAM:PF03131 |
| DBxref | PFAM:PF07716 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1602843..1606392 - |
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