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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1614976..1617100- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007155-T1 ID=KJC3_007155-T1|Name=KJC3_007155-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2125bp|location=Sequence derived from alignment at ch5:1614976..1617100- (Aspergillus niger KJC3)
CAGCGGCGTCTGTCATTCAACTACACAGTATAAACGAGAGATTCTACTTT
GAGTGACTTGCTAACGTGGCTTTTTGCCGCCTACTCAGGTTAAAATGACA
GAAGATCAGGATCTGATGGCCAAAATCAGCCAGCTTGCTGGTAAGCGCAT
TCTAGCTATCCGTAACCGTGCCAGCCTCTAACCTCATCCAGGCCAGATTA
ATAGGCACAAAACCCAACAATCTCAACCTGAGTCCCCCTACAGTAGTGAA
ATAGCTCCAGGCCACCACGTCTCACGACATGTTCCTTACCGAGGTCGCGG
GTGGGCGCCTTATCGTGGACGACACTACGCACGAGGACGTCATGTAGCCC
CCCATCGCCACCGTACCCTCATCCTCAACAACGCAACATCAGGTACACCT
GGATCGGCTACTCCAGCTGGCACGGGGACTGATACAGACGGTGAGGCGCG
ATCTGCAACACCAAACGAATGGGTTGTGAAACGCGATCGTCATATGCAGC
TCATCAACACTTCGATATACGACAAAGAGACACAAGCGAGGACGAAGGCA
ATGGAGGAGAGTCGCCAGGCCAAGGCGCAAAAGAGAGCACAGGTCGAGCA
GGCTAGAGTTTTGAATTACGCACAGGGTGTTGGCCGAGTGCATCCTACGG
GCTTCGCGGCTCCTCAGGTGTCTACTGCAGACCCGTCAGCGGAGTATCAG
GTTTTCGTCAACGATATACCGTTCCGAGTGTCGCGTGGTGGTGGCAAGCT
AATCCGGGTGTCTGGTGCGTGCGCTGTAGATACTCTGGTCAAGCGAACTA
GCTTACCGGTTATAGATAATCCGAATACTGCCAACGCTACGCCAAAACGA
GTGACAGTGGCAGGCGTCGCTTTTGTCCGGAGCAAGAACGGAAATCTCCA
CCGTTTGGGTGCTGTTACATCAAAAAGGTGGCGGCTGTGTTGTCCATGTG
GCGAGTTTGGAAGCTTACTTCATTTATAGAAAACCAATGACGGTCAAGAA
GAAGAACGCGCTTTGCCAGCGATTTACTACGACGGGTACCAATGCTTTCC
CTACACGAGGCCCTGAGTGGCACTTGCCCCCATCTCATTATTTGTTTCAT
CTTCTGCGGGATCACGCTGATCAGGATCTTCAACCGTTTAGGCAGCTGCT
ACAAAGGACCAACATGCCCCTATATTCACGACCCGAACAAGGTTGCAATG
TGCAAGGACTTCCTTCAGACTGGTCAATGCAATGCAGGTATAAGTTGTGA
TCTCTCTCACGAGCCTTCGCCCCACAGATCCCCTGCCTGCGTGCATTTTC
TGCGAGGGCGCTGCTCCAACCCCGAATGTCGCTATGCCCATGTTCGCGTG
ACCCCGGGCGCTCCTGTGTGCAGGGACTTTGCGGTTCTAGGATACTGCGA
AAAAGGTGCCGAATGCGACCAACGACACGTTCACGAATGCCCAGACTATG
CGAATGAGGGCGTTTGCAACAAGAAGCGCTGCCGCCTTCCCCATGTTGAT
CGGGCCGGACAGATCAGGAAAAACGCCGCTTCTAAGACCGATGCTATGGC
CCAAGCGGAGGAGTCTGATGCATCTAGCGAGGAGGAAGAGTACGATGAGA
TTGACACGGATGACGTCGATTCGGACGATCTCGATGAGGATGAGCCCCAA
CTCATCGCGGCCGAGTCAGATACTGGCGAGGTGTCGCAACAACAGGACTA
CATCCGTCTCTAAACATTCATACCCACTAACCTTACTACAGACTGTAATT
GAAGTTGGCTTGGATTTACGGATACCCCAAACAGAGCAAGAAAAGGGCAA
TGGCAAAAGGAAAGAAATGCAAATAAATCAGAAAGAAAGAAACACAGAAT
AAGAGGGAAATATATCATTACATAGTGGCCAATTAATGCCTGCCTTGAAA
GATTGATGCCTTACGGACTGTCGTGTTCCAGTCGCAGATGAAGATACCCA
TATGCGTTCAACGTGTTATTTACTCGCAGACGGTGTGTATACGAGTCTGT
TTGACGATCTTGGATAAATTTCAAGGGTTGGTAAGGGGTGACACTTCGAA
TTGTAGCGCTACATGATGACGTCGTGTCTTGAGACGTGAAGCCATAGGTA
GCATACCAATGGAAATGAATATCAT back to topCoding sequence (CDS) from alignment at ch5:1614976..1617100- >KJC3_007155-T1 ID=KJC3_007155-T1|Name=KJC3_007155-T1|organism=Aspergillus niger KJC3|type=CDS|length=6795bp|location=Sequence derived from alignment at ch5:1614976..1617100- (Aspergillus niger KJC3)
GCAGCTGCTACAAAGGACCAACATGCCCCTATATTCACGACCCGAACAAG
GTTGCAATGTGCAAGGACTTCCTTCAGACTGGTCAATGCAATGCAGGTAT
AAGTTGTGATCTCTCTCACGAGCCTTCGCCCCACAGATCCCCTGCCTGCG
TGCATTTTCTGCGAGGGCGCTGCTCCAACCCCGAATGTCGCTATGCCCAT
GTTCGCGTGACCCCGGGCGCTCCTGTGTGCAGGGACTTTGCGGTTCTAGG
ATACTGCGAAAAAGGTGCCGAATGCGACCAACGACACGTTCACGAATGCC
CAGACTATGCGAATGAGGGCGTTTGCAACAAGAAGCGCTGCCGCCTTCCC
CATGTTGATCGGGCCGGACAGATCAGGAAAAACGCCGCTTCTAAGACCGA
TGCTATGGCCCAAGCGGAGGAGTCTGATGCATCTAGCGAGGAGGAAGAGT
ACGATGAGATTGACACGGATGACGTCGATTCGGACGATCTCGATGAGGAT
GAGCCCCAACTCATCGCGGCCGAGTCAGATACTGGCGAGGTGTCGCAACA
ACAGGACTACATCCGTCTCTAAAAAACCAATGACGGTCAAGAAGAAGAAC
GCGCTTTGCCAGCGATTTACTACGACGGATAATCCGAATACTGCCAACGC
TACGCCAAAACGAGTGACAGTGGCAGGCGTCGCTTTTGTCCGGAGCAAGA
ACGGAAATCTCCACCGTTTGGGTGCTGTTACATCAAAAAGGCCAGATTAA
TAGGCACAAAACCCAACAATCTCAACCTGAGTCCCCCTACAGTAGTGAAA
TAGCTCCAGGCCACCACGTCTCACGACATGTTCCTTACCGAGGTCGCGGG
TGGGCGCCTTATCGTGGACGACACTACGCACGAGGACGTCATGTAGCCCC
CCATCGCCACCGTACCCTCATCCTCAACAACGCAACATCAGGTACACCTG
GATCGGCTACTCCAGCTGGCACGGGGACTGATACAGACGGTGAGGCGCGA
TCTGCAACACCAAACGAATGGGTTGTGAAACGCGATCGTCATATGCAGCT
CATCAACACTTCGATATACGACAAAGAGACACAAGCGAGGACGAAGGCAA
TGGAGGAGAGTCGCCAGGCCAAGGCGCAAAAGAGAGCACAGGTCGAGCAG
GCTAGAGTTTTGAATTACGCACAGGGTGTTGGCCGAGTGCATCCTACGGG
CTTCGCGGCTCCTCAGGTGTCTACTGCAGACCCGTCAGCGGAGTATCAGG
TTTTCGTCAACGATATACCGTTCCGAGTGTCGCGTGGTGGTGGCAAGCTA
ATCCGGGTGTCTGATGACAGAAGATCAGGATCTGATGGCCAAAATCAGCC
AGCTTGCTGGCAGCTGCTACAAAGGACCAACATGCCCCTATATTCACGAC
CCGAACAAGGTTGCAATGTGCAAGGACTTCCTTCAGACTGGTCAATGCAA
TGCAGGTATAAGTTGTGATCTCTCTCACGAGCCTTCGCCCCACAGATCCC
CTGCCTGCGTGCATTTTCTGCGAGGGCGCTGCTCCAACCCCGAATGTCGC
TATGCCCATGTTCGCGTGACCCCGGGCGCTCCTGTGTGCAGGGACTTTGC
GGTTCTAGGATACTGCGAAAAAGGTGCCGAATGCGACCAACGACACGTTC
ACGAATGCCCAGACTATGCGAATGAGGGCGTTTGCAACAAGAAGCGCTGC
CGCCTTCCCCATGTTGATCGGGCCGGACAGATCAGGAAAAACGCCGCTTC
TAAGACCGATGCTATGGCCCAAGCGGAGGAGTCTGATGCATCTAGCGAGG
AGGAAGAGTACGATGAGATTGACACGGATGACGTCGATTCGGACGATCTC
GATGAGGATGAGCCCCAACTCATCGCGGCCGAGTCAGATACTGGCGAGGT
GTCGCAACAACAGGACTACATCCGTCTCTAAAAAACCAATGACGGTCAAG
AAGAAGAACGCGCTTTGCCAGCGATTTACTACGACGGATAATCCGAATAC
TGCCAACGCTACGCCAAAACGAGTGACAGTGGCAGGCGTCGCTTTTGTCC
GGAGCAAGAACGGAAATCTCCACCGTTTGGGTGCTGTTACATCAAAAAGG
CCAGATTAATAGGCACAAAACCCAACAATCTCAACCTGAGTCCCCCTACA
GTAGTGAAATAGCTCCAGGCCACCACGTCTCACGACATGTTCCTTACCGA
GGTCGCGGGTGGGCGCCTTATCGTGGACGACACTACGCACGAGGACGTCA
TGTAGCCCCCCATCGCCACCGTACCCTCATCCTCAACAACGCAACATCAG
GTACACCTGGATCGGCTACTCCAGCTGGCACGGGGACTGATACAGACGGT
GAGGCGCGATCTGCAACACCAAACGAATGGGTTGTGAAACGCGATCGTCA
TATGCAGCTCATCAACACTTCGATATACGACAAAGAGACACAAGCGAGGA
CGAAGGCAATGGAGGAGAGTCGCCAGGCCAAGGCGCAAAAGAGAGCACAG
GTCGAGCAGGCTAGAGTTTTGAATTACGCACAGGGTGTTGGCCGAGTGCA
TCCTACGGGCTTCGCGGCTCCTCAGGTGTCTACTGCAGACCCGTCAGCGG
AGTATCAGGTTTTCGTCAACGATATACCGTTCCGAGTGTCGCGTGGTGGT
GGCAAGCTAATCCGGGTGTCTGATGACAGAAGATCAGGATCTGATGGCCA
AAATCAGCCAGCTTGCTGGCAGCTGCTACAAAGGACCAACATGCCCCTAT
ATTCACGACCCGAACAAGGTTGCAATGTGCAAGGACTTCCTTCAGACTGG
TCAATGCAATGCAGGTATAAGTTGTGATCTCTCTCACGAGCCTTCGCCCC
ACAGATCCCCTGCCTGCGTGCATTTTCTGCGAGGGCGCTGCTCCAACCCC
GAATGTCGCTATGCCCATGTTCGCGTGACCCCGGGCGCTCCTGTGTGCAG
GGACTTTGCGGTTCTAGGATACTGCGAAAAAGGTGCCGAATGCGACCAAC
GACACGTTCACGAATGCCCAGACTATGCGAATGAGGGCGTTTGCAACAAG
AAGCGCTGCCGCCTTCCCCATGTTGATCGGGCCGGACAGATCAGGAAAAA
CGCCGCTTCTAAGACCGATGCTATGGCCCAAGCGGAGGAGTCTGATGCAT
CTAGCGAGGAGGAAGAGTACGATGAGATTGACACGGATGACGTCGATTCG
GACGATCTCGATGAGGATGAGCCCCAACTCATCGCGGCCGAGTCAGATAC
TGGCGAGGTGTCGCAACAACAGGACTACATCCGTCTCTAAAAAACCAATG
ACGGTCAAGAAGAAGAACGCGCTTTGCCAGCGATTTACTACGACGGATAA
TCCGAATACTGCCAACGCTACGCCAAAACGAGTGACAGTGGCAGGCGTCG
CTTTTGTCCGGAGCAAGAACGGAAATCTCCACCGTTTGGGTGCTGTTACA
TCAAAAAGGCCAGATTAATAGGCACAAAACCCAACAATCTCAACCTGAGT
CCCCCTACAGTAGTGAAATAGCTCCAGGCCACCACGTCTCACGACATGTT
CCTTACCGAGGTCGCGGGTGGGCGCCTTATCGTGGACGACACTACGCACG
AGGACGTCATGTAGCCCCCCATCGCCACCGTACCCTCATCCTCAACAACG
CAACATCAGGTACACCTGGATCGGCTACTCCAGCTGGCACGGGGACTGAT
ACAGACGGTGAGGCGCGATCTGCAACACCAAACGAATGGGTTGTGAAACG
CGATCGTCATATGCAGCTCATCAACACTTCGATATACGACAAAGAGACAC
AAGCGAGGACGAAGGCAATGGAGGAGAGTCGCCAGGCCAAGGCGCAAAAG
AGAGCACAGGTCGAGCAGGCTAGAGTTTTGAATTACGCACAGGGTGTTGG
CCGAGTGCATCCTACGGGCTTCGCGGCTCCTCAGGTGTCTACTGCAGACC
CGTCAGCGGAGTATCAGGTTTTCGTCAACGATATACCGTTCCGAGTGTCG
CGTGGTGGTGGCAAGCTAATCCGGGTGTCTGATGACAGAAGATCAGGATC
TGATGGCCAAAATCAGCCAGCTTGCTGGCAGCTGCTACAAAGGACCAACA
TGCCCCTATATTCACGACCCGAACAAGGTTGCAATGTGCAAGGACTTCCT
TCAGACTGGTCAATGCAATGCAGGTATAAGTTGTGATCTCTCTCACGAGC
CTTCGCCCCACAGATCCCCTGCCTGCGTGCATTTTCTGCGAGGGCGCTGC
TCCAACCCCGAATGTCGCTATGCCCATGTTCGCGTGACCCCGGGCGCTCC
TGTGTGCAGGGACTTTGCGGTTCTAGGATACTGCGAAAAAGGTGCCGAAT
GCGACCAACGACACGTTCACGAATGCCCAGACTATGCGAATGAGGGCGTT
TGCAACAAGAAGCGCTGCCGCCTTCCCCATGTTGATCGGGCCGGACAGAT
CAGGAAAAACGCCGCTTCTAAGACCGATGCTATGGCCCAAGCGGAGGAGT
CTGATGCATCTAGCGAGGAGGAAGAGTACGATGAGATTGACACGGATGAC
GTCGATTCGGACGATCTCGATGAGGATGAGCCCCAACTCATCGCGGCCGA
GTCAGATACTGGCGAGGTGTCGCAACAACAGGACTACATCCGTCTCTAAA
AAACCAATGACGGTCAAGAAGAAGAACGCGCTTTGCCAGCGATTTACTAC
GACGGATAATCCGAATACTGCCAACGCTACGCCAAAACGAGTGACAGTGG
CAGGCGTCGCTTTTGTCCGGAGCAAGAACGGAAATCTCCACCGTTTGGGT
GCTGTTACATCAAAAAGGCCAGATTAATAGGCACAAAACCCAACAATCTC
AACCTGAGTCCCCCTACAGTAGTGAAATAGCTCCAGGCCACCACGTCTCA
CGACATGTTCCTTACCGAGGTCGCGGGTGGGCGCCTTATCGTGGACGACA
CTACGCACGAGGACGTCATGTAGCCCCCCATCGCCACCGTACCCTCATCC
TCAACAACGCAACATCAGGTACACCTGGATCGGCTACTCCAGCTGGCACG
GGGACTGATACAGACGGTGAGGCGCGATCTGCAACACCAAACGAATGGGT
TGTGAAACGCGATCGTCATATGCAGCTCATCAACACTTCGATATACGACA
AAGAGACACAAGCGAGGACGAAGGCAATGGAGGAGAGTCGCCAGGCCAAG
GCGCAAAAGAGAGCACAGGTCGAGCAGGCTAGAGTTTTGAATTACGCACA
GGGTGTTGGCCGAGTGCATCCTACGGGCTTCGCGGCTCCTCAGGTGTCTA
CTGCAGACCCGTCAGCGGAGTATCAGGTTTTCGTCAACGATATACCGTTC
CGAGTGTCGCGTGGTGGTGGCAAGCTAATCCGGGTGTCTGATGACAGAAG
ATCAGGATCTGATGGCCAAAATCAGCCAGCTTGCTGGCAGCTGCTACAAA
GGACCAACATGCCCCTATATTCACGACCCGAACAAGGTTGCAATGTGCAA
GGACTTCCTTCAGACTGGTCAATGCAATGCAGGTATAAGTTGTGATCTCT
CTCACGAGCCTTCGCCCCACAGATCCCCTGCCTGCGTGCATTTTCTGCGA
GGGCGCTGCTCCAACCCCGAATGTCGCTATGCCCATGTTCGCGTGACCCC
GGGCGCTCCTGTGTGCAGGGACTTTGCGGTTCTAGGATACTGCGAAAAAG
GTGCCGAATGCGACCAACGACACGTTCACGAATGCCCAGACTATGCGAAT
GAGGGCGTTTGCAACAAGAAGCGCTGCCGCCTTCCCCATGTTGATCGGGC
CGGACAGATCAGGAAAAACGCCGCTTCTAAGACCGATGCTATGGCCCAAG
CGGAGGAGTCTGATGCATCTAGCGAGGAGGAAGAGTACGATGAGATTGAC
ACGGATGACGTCGATTCGGACGATCTCGATGAGGATGAGCCCCAACTCAT
CGCGGCCGAGTCAGATACTGGCGAGGTGTCGCAACAACAGGACTACATCC
GTCTCTAAAAAACCAATGACGGTCAAGAAGAAGAACGCGCTTTGCCAGCG
ATTTACTACGACGGATAATCCGAATACTGCCAACGCTACGCCAAAACGAG
TGACAGTGGCAGGCGTCGCTTTTGTCCGGAGCAAGAACGGAAATCTCCAC
CGTTTGGGTGCTGTTACATCAAAAAGGCCAGATTAATAGGCACAAAACCC
AACAATCTCAACCTGAGTCCCCCTACAGTAGTGAAATAGCTCCAGGCCAC
CACGTCTCACGACATGTTCCTTACCGAGGTCGCGGGTGGGCGCCTTATCG
TGGACGACACTACGCACGAGGACGTCATGTAGCCCCCCATCGCCACCGTA
CCCTCATCCTCAACAACGCAACATCAGGTACACCTGGATCGGCTACTCCA
GCTGGCACGGGGACTGATACAGACGGTGAGGCGCGATCTGCAACACCAAA
CGAATGGGTTGTGAAACGCGATCGTCATATGCAGCTCATCAACACTTCGA
TATACGACAAAGAGACACAAGCGAGGACGAAGGCAATGGAGGAGAGTCGC
CAGGCCAAGGCGCAAAAGAGAGCACAGGTCGAGCAGGCTAGAGTTTTGAA
TTACGCACAGGGTGTTGGCCGAGTGCATCCTACGGGCTTCGCGGCTCCTC
AGGTGTCTACTGCAGACCCGTCAGCGGAGTATCAGGTTTTCGTCAACGAT
ATACCGTTCCGAGTGTCGCGTGGTGGTGGCAAGCTAATCCGGGTGTCTGA
TGACAGAAGATCAGGATCTGATGGCCAAAATCAGCCAGCTTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007155-T1.utr3p1 | KJC3_007155-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007155-T1.utr5p1 | KJC3_007155-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036855 |
| DBxref | InterPro:IPR000571 |
| DBxref | PFAM:PF00642 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1614976..1617100 - |
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