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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1621457..1624487- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007158-T1 ID=KJC3_007158-T1|Name=KJC3_007158-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3031bp|location=Sequence derived from alignment at ch5:1621457..1624487- (Aspergillus niger KJC3)
ATCAATGTTATGCATGCGTGCTGCACACGAACAGGGATTGAACCTTGTTG
ATACTGGGCCAGTTAAGGTGGCCCTCCAATCCACTTCAAGAAACCATTGA
GGAAACTATTCCAATAGCCGCAACTTTATGCATTGCAAGCCATGTGCTCG
CTGACGTGAACGACTTAAGACTGTTGCCTTCCACGTACCCTTCCCCTGAA
CCGCCGAGGTTGATCGTTGAGTTTAGGTAACGCTCGGCCCTTTTGGGAAC
CGACGGCTGTCGATCAGGGAAGCCACCCGTGGTTCGGCTAACAGAAGCAT
TTGGATCAAACAGACATGGAACGGAAAGAGAAGCGGGAAAGAAAGCTGAA
AGAAAGGAAAGTTAAACGACACCCGTACGCTGCTTAACTGGATTAACTAC
ACCTAAATCGCTTTTCTGGATGAAGACCAGTGTGTGTTCTACATGCCTCA
TTGCGAGTCAGGAATTACCACCTCATTCAGGGCGGTGGAGCGGCTGGGAG
AGTCCGGCTGATTACTGCGATGAGAGAAAATTTCTGAACGACTTCAAATA
TGCAGGGTCGTCTATGATTGGAGGAGTTGAAACCACAGTTCTCCAGTTTC
AAGGAGCACGGAGCTGAGTAAACCCATCTGAGTTTCTTAGGGTTTCCGAT
AGGCGCTTCTATACCCACTTCCTCCTCGTCAGCCATCGCCTGATCCGCTT
TTGCGGAAACACGGAATGCGCACCCAACAGTAAGTGCACCTGAAGACGTG
ATCGTCCTGAGTAACTTGTTCTACACTGCAGATTGTCGGATGAAGAAGAC
ATTGCAGATCAACCAATTCAATAGCAGAAGATTAGACTTCTAAATTCCCC
AAACCTGGGGGGTTTCTTAAACGATCTGCTATCAACGTGATGGAAGTGAA
ACACTCGGCCGCTATCACCGCCCATTGCGTATGCTCGCCACTATTAACAC
ATTTGGAGCCAGGGTTCCTGGGCCGTGGATCCCGCGATCCGGATACTGTG
GTGCAAAGTGCGAGTGAACTAGCTGAAGGGTGGATTGAGATTTATATTAA
CTGATATTACGCTGGAAATTACTTTGCATGACCCTGATGAATCGGGTTTG
AAGCATAAGTCAGGAATTGCTATACTTAAGTCGCCAACCGAAATACTTTT
ATCTATACTATCCAGCCTACCAGGGTTACTGGCTACACATCTAATGATGG
CTCGTCCCTTGCCACGAGGGTGGTCTGCTCTTCAACAACAGAGTGGCCAC
ACTGGGACCAGTTCGACTCAAGTCATACGACCGGCTCCACTTGCTTAGCA
CACCATGGAAACTATGAGCGTGCACTGGTGAATAATTTTCAATTGCGTTT
CAAACGAATCAAAAATCCAGTTTGTGGACTGTGCAGTTGAATTCGCACCC
ACAAATAAGAGGGCTCGATTTTAAGCTCGCAAGATGAGGGTCCTTTGTCT
CCCTGCTCTATGGGCGCGCCGAGTATCCTCATACGGAAGAGGGACCCATA
TCTAGATCTCCCACTTTTCGCTGCGATCGAGCGTTCGAGGTATGTCCTTG
GTCCACTCGATACATATTCAATAAGCTTCCACCTTATTTTGTAGTTCTGT
CTTCTTTCCCCCCAGTCTACATAGTCCATGTTCGGCATATACTCGGGGGT
TCCTTCGTTATATCTCAGCACACTCCTCGTCTTACTTGCATATCTATTAT
CAAGACCCTTTTCTATATCCACCGTCCAAATGGACCACGAAGCGTAATAA
TCGCAGGCATCAACTTGCTTACTCTCGCTCAATTAAACACTCATTCATAT
TCATCCTGCCAGTTCTAAAACCGTCATTCCCAGTAACAAAGCATCCAACA
TGGCTCCCACATCGAGGGGAGCTGAAATGATAAGCATCGTTACGGTGCTT
GTTAGTCTCGCATTTCTAGCAGTCATTTTACGCATAGTTGCCCGATTCAA
ACGCAAAGTTCATTTCGGTGTGGACGACTACCTTTGTTTTGCATGCATGC
TCCTGCTCATTGGCATGCTCATTGAATTGTCTCTTTGTGGGTTATCCTAA
AGATTATTCAATAATTTAGAGTATTCAACCTTGCTAATAATCAACCCAAG
GGGTCACCATCGGCGGCAACGGATCTCATCAAAGCAAGTTAAGCAGCGAA
ACAATGATGAACTTCTACAAGGTACTAACCACCCCTCCCAACCACACCCA
ATCTTTACCAACGAACCACTCCAGATCTTCCTCGCCAACCAATTCACCTA
CTTCTCCCTCTGTCCCCTCATCAAAGTCTCAATCGTTTGCTTCTACCGCC
GCATTTTCACCACCCGAACCTTCCAATGGACCTCCTTCAGCATCAACACC
CTCATAATCCTCTGGGGTCTAGGCGTCTTCCTAGCCTGCGCTCTCCAATG
CCGCCCCCTAAGAGCCTACTGGGACCAAAGCGTCGACGGCCAATGCATAG
ACGGCTACACCCTGATCGTCGTCAACCAGATATTCAACGTGTTCATGGAT
TTCGTCCTCCTCGCCCTCCCCATCCCCCTCATTTGGGGTCTCCACCGCGC
CTGGCAAGACAAACTCGCCATCAACGGCGTCTTCGCTCTCGGTGGCTTCG
TTTGCTTCGCGAGTATATTCCGCGTTGTGGTCCTCTTCTGGATCAAGGAT
TCAGACATGACGTATACCGTCTATCAAGCTACGCTTTGGACGCATATTGA
GCCGTCTATTGGGCTTATCTGTTCTTGTTTGCCGACTATTCGAGGCTTGT
TTCCGAGAGGAAAGCTCGGGAGCAATAAATCTCATAAATATCAAAATGAG
GTGCCATATTATGGGAATACGGATGTCAGCACCTCGAACTTTGTGGCTAC
GGGTCGCAAGACGCCCACTGCGGAGTCTATTAAGTTGGAGGATGGTGCCC
CGAGAAGGTCGAATTCGAGTGAAGGCGGGCTGCCGTCTAGTGTTAAGAGT
AATGATACTAGCTGGTTGGATATAACTGTCCGCACGGAGATTGATGTCAG
GCAAGATGATCTGCCGCGGTATTTCAGATGA back to topCoding sequence (CDS) from alignment at ch5:1621457..1624487- >KJC3_007158-T1 ID=KJC3_007158-T1|Name=KJC3_007158-T1|organism=Aspergillus niger KJC3|type=CDS|length=3195bp|location=Sequence derived from alignment at ch5:1621457..1624487- (Aspergillus niger KJC3)
ATCTTCCTCGCCAACCAATTCACCTACTTCTCCCTCTGTCCCCTCATCAA
AGTCTCAATCGTTTGCTTCTACCGCCGCATTTTCACCACCCGAACCTTCC
AATGGACCTCCTTCAGCATCAACACCCTCATAATCCTCTGGGGTCTAGGC
GTCTTCCTAGCCTGCGCTCTCCAATGCCGCCCCCTAAGAGCCTACTGGGA
CCAAAGCGTCGACGGCCAATGCATAGACGGCTACACCCTGATCGTCGTCA
ACCAGATATTCAACGTGTTCATGGATTTCGTCCTCCTCGCCCTCCCCATC
CCCCTCATTTGGGGTCTCCACCGCGCCTGGCAAGACAAACTCGCCATCAA
CGGCGTCTTCGCTCTCGGTGGCTTCGTTTGCTTCGCGAGTATATTCCGCG
TTGTGGTCCTCTTCTGGATCAAGGATTCAGACATGACGTATACCGTCTAT
CAAGCTACGCTTTGGACGCATATTGAGCCGTCTATTGGGCTTATCTGTTC
TTGTTTGCCGACTATTCGAGGCTTGTTTCCGAGAGGAAAGCTCGGGAGCA
ATAAATCTCATAAATATCAAAATGAGGTGCCATATTATGGGAATACGGAT
GTCAGCACCTCGAACTTTGTGGCTACGGGTCGCAAGACGCCCACTGCGGA
GTCTATTAAGTTGGAGGATGGTGCCCCGAGAAGGTCGAATTCGAGTGAAG
GCGGGCTGCCGTCTAGTGTTAAGAGTAATGATACTAGCTGGTTGGATATA
ACTGTCCGCACGGAGATTGATGTCAGGCAAGATGATCTGCCGCGGTATTT
CAGATGAGGGTCACCATCGGCGGCAACGGATCTCATCAAAGCAAGTTAAG
CAGCGAAACAATGATGAACTTCTACAAGATGGCTCCCACATCGAGGGGAG
CTGAAATGATAAGCATCGTTACGGTGCTTGTTAGTCTCGCATTTCTAGCA
GTCATTTTACGCATAGTTGCCCGATTCAAACGCAAAGTTCATTTCGGTGT
GGACGACTACCTTTGTTTTGCATGCATGCTCCTGCTCATTGGCATGCTCA
TTGAATTGTCTCTTTATCTTCCTCGCCAACCAATTCACCTACTTCTCCCT
CTGTCCCCTCATCAAAGTCTCAATCGTTTGCTTCTACCGCCGCATTTTCA
CCACCCGAACCTTCCAATGGACCTCCTTCAGCATCAACACCCTCATAATC
CTCTGGGGTCTAGGCGTCTTCCTAGCCTGCGCTCTCCAATGCCGCCCCCT
AAGAGCCTACTGGGACCAAAGCGTCGACGGCCAATGCATAGACGGCTACA
CCCTGATCGTCGTCAACCAGATATTCAACGTGTTCATGGATTTCGTCCTC
CTCGCCCTCCCCATCCCCCTCATTTGGGGTCTCCACCGCGCCTGGCAAGA
CAAACTCGCCATCAACGGCGTCTTCGCTCTCGGTGGCTTCGTTTGCTTCG
CGAGTATATTCCGCGTTGTGGTCCTCTTCTGGATCAAGGATTCAGACATG
ACGTATACCGTCTATCAAGCTACGCTTTGGACGCATATTGAGCCGTCTAT
TGGGCTTATCTGTTCTTGTTTGCCGACTATTCGAGGCTTGTTTCCGAGAG
GAAAGCTCGGGAGCAATAAATCTCATAAATATCAAAATGAGGTGCCATAT
TATGGGAATACGGATGTCAGCACCTCGAACTTTGTGGCTACGGGTCGCAA
GACGCCCACTGCGGAGTCTATTAAGTTGGAGGATGGTGCCCCGAGAAGGT
CGAATTCGAGTGAAGGCGGGCTGCCGTCTAGTGTTAAGAGTAATGATACT
AGCTGGTTGGATATAACTGTCCGCACGGAGATTGATGTCAGGCAAGATGA
TCTGCCGCGGTATTTCAGATGAGGGTCACCATCGGCGGCAACGGATCTCA
TCAAAGCAAGTTAAGCAGCGAAACAATGATGAACTTCTACAAGATGGCTC
CCACATCGAGGGGAGCTGAAATGATAAGCATCGTTACGGTGCTTGTTAGT
CTCGCATTTCTAGCAGTCATTTTACGCATAGTTGCCCGATTCAAACGCAA
AGTTCATTTCGGTGTGGACGACTACCTTTGTTTTGCATGCATGCTCCTGC
TCATTGGCATGCTCATTGAATTGTCTCTTTATCTTCCTCGCCAACCAATT
CACCTACTTCTCCCTCTGTCCCCTCATCAAAGTCTCAATCGTTTGCTTCT
ACCGCCGCATTTTCACCACCCGAACCTTCCAATGGACCTCCTTCAGCATC
AACACCCTCATAATCCTCTGGGGTCTAGGCGTCTTCCTAGCCTGCGCTCT
CCAATGCCGCCCCCTAAGAGCCTACTGGGACCAAAGCGTCGACGGCCAAT
GCATAGACGGCTACACCCTGATCGTCGTCAACCAGATATTCAACGTGTTC
ATGGATTTCGTCCTCCTCGCCCTCCCCATCCCCCTCATTTGGGGTCTCCA
CCGCGCCTGGCAAGACAAACTCGCCATCAACGGCGTCTTCGCTCTCGGTG
GCTTCGTTTGCTTCGCGAGTATATTCCGCGTTGTGGTCCTCTTCTGGATC
AAGGATTCAGACATGACGTATACCGTCTATCAAGCTACGCTTTGGACGCA
TATTGAGCCGTCTATTGGGCTTATCTGTTCTTGTTTGCCGACTATTCGAG
GCTTGTTTCCGAGAGGAAAGCTCGGGAGCAATAAATCTCATAAATATCAA
AATGAGGTGCCATATTATGGGAATACGGATGTCAGCACCTCGAACTTTGT
GGCTACGGGTCGCAAGACGCCCACTGCGGAGTCTATTAAGTTGGAGGATG
GTGCCCCGAGAAGGTCGAATTCGAGTGAAGGCGGGCTGCCGTCTAGTGTT
AAGAGTAATGATACTAGCTGGTTGGATATAACTGTCCGCACGGAGATTGA
TGTCAGGCAAGATGATCTGCCGCGGTATTTCAGATGAGGGTCACCATCGG
CGGCAACGGATCTCATCAAAGCAAGTTAAGCAGCGAAACAATGATGAACT
TCTACAAGATGGCTCCCACATCGAGGGGAGCTGAAATGATAAGCATCGTT
ACGGTGCTTGTTAGTCTCGCATTTCTAGCAGTCATTTTACGCATAGTTGC
CCGATTCAAACGCAAAGTTCATTTCGGTGTGGACGACTACCTTTGTTTTG
CATGCATGCTCCTGCTCATTGGCATGCTCATTGAATTGTCTCTTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1621457..1624487 - |
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