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KJC3_007170-T1, KJC3_007170-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007170-T1
Unique NameKJC3_007170-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1666686..1667852-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007170-T1 ID=KJC3_007170-T1|Name=KJC3_007170-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1167bp|location=Sequence derived from alignment at ch5:1666686..1667852- (Aspergillus niger KJC3)
ATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGC
TCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCA
CCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGC
TCCGACATCGTCCTCAAGGACATCACCGTCCCTGCCGGTGAGACCCTTAA
CCTGAAGGACCTCAACGACGGCACCACCGTAAGCGTCCCCTCCCAGCCCT
AGCAGCAGCCCCAATCCTAACAGGCATTCCAGGTCACCTTCGAGGGAACC
ACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTCCGG
TAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCAACG
GCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAGCCC
AAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCTTTA
CATCAAAAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACCTCG
TGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGCGGT
CACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCATCAC
CGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTGGTG
AGAACATCTACTTCTCCGGCGGTACCTGCTCTGGCGGTCACGGTCTCTCC
ATCGGCTCCGTCGGTGGCCGCGATGACAACACCGTCAAGAACGTCACTTT
CATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGACCG
TCTACGACGCTACCGGTACTGTCGAGGACATCACCTACTCCAACATCCAG
CTCTCCGGTATCTCCGACTACGGTATCGTCATTGAGCAGGACTACGAGAA
CGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACGTCA
CCCTCGAGGACATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATCTAC
ATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCATTGA
CATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCCTCTGGTG
CTTCTTGCGATCAGTAA
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Coding sequence (CDS) from alignment at ch5:1666686..1667852-

>KJC3_007170-T1 ID=KJC3_007170-T1|Name=KJC3_007170-T1|organism=Aspergillus niger KJC3|type=CDS|length=2226bp|location=Sequence derived from alignment at ch5:1666686..1667852- (Aspergillus niger KJC3)
GTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGGAGTGGGATGGACC
CCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACCCAGTCCTCCGACG
CCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAAC
GGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACGACCTCGACGACTC
CAAGATCTCCGGTCTTTACATCAAAAACACCCCCGTCCAGGCCATCTCCG
TCGAGTCGGACAACCTCGTGATCGAGGACGTCACCATCGACAACAGCGAC
GGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCGACATCAGCGAGAG
TACCTACATCACCATCACCGGCGCCACCGTCAAGAACCAGGACGACTGCG
TCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGGCGGTACCTGCTCT
GGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCCGCGATGACAACAC
CGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCCGACTCTGAGAACG
GTGTTCGCATCAAGACCGTCTACGACGCTACCGGTACTGTCGAGGACATC
ACCTACTCCAACATCCAGCTCTCCGGTATCTCCGACTACGGTATCGTCAT
TGAGCAGGACTACGAGAACGGTGACCCCACTGGTACTCCCTCCAACGGTG
TTACCATCTCCGACGTCACCCTCGAGGACATCACTGGCTCGGTTGACTCC
GACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCAGCTGCTCTGACTG
GACCATGTCTGGCATTGACATCACCGGCGGTGAGACCAGCAGCGATTGCG
AGAACGTTCCCTCTGGTGCTTCTTGCGATCAGTAAATGCCTTCTGCCAAG
CCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTCTGGCTGCTCCTGC
GCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACCTGCACCTTCACTG
ATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTCCGACATCGTCCTC
AAGGACATCACCGTCCCTGCCGGTGAGACCCTTAACCTGAAGGACCTCAA
CGACGGCACCACCGTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGG
AGTGGGATGGACCCCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACC
CAGTCCTCCGACGCCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGG
TGAGGGAACCAACGGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACG
ACCTCGACGACTCCAAGATCTCCGGTCTTTACATCAAAAACACCCCCGTC
CAGGCCATCTCCGTCGAGTCGGACAACCTCGTGATCGAGGACGTCACCAT
CGACAACAGCGACGGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCG
ACATCAGCGAGAGTACCTACATCACCATCACCGGCGCCACCGTCAAGAAC
CAGGACGACTGCGTCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGG
CGGTACCTGCTCTGGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCC
GCGATGACAACACCGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCC
GACTCTGAGAACGGTGTTCGCATCAAGACCGTCTACGACGCTACCGGTAC
TGTCGAGGACATCACCTACTCCAACATCCAGCTCTCCGGTATCTCCGACT
ACGGTATCGTCATTGAGCAGGACTACGAGAACGGTGACCCCACTGGTACT
CCCTCCAACGGTGTTACCATCTCCGACGTCACCCTCGAGGACATCACTGG
CTCGGTTGACTCCGACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCA
GCTGCTCTGACTGGACCATGTCTGGCATTGACATCACCGGCGGTGAGACC
AGCAGCGATTGCGAGAACGTTCCCTCTGGTGCTTCTTGCGATCAGTAAAT
GCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTC
TGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACC
TGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTC
CGACATCGTCCTCAAGGACATCACCGTCCCTGCCGGTGAGACCCTTAACC
TGAAGGACCTCAACGACGGCACCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007170KJC3_007170Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007170-T1KJC3_007170-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007170-T1.cdsKJC3_007170-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007170-T1.exon2KJC3_007170-T1.exon2Aspergillus niger KJC3exon
KJC3_007170-T1.exon1KJC3_007170-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1666686..1667852 -
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