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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1890810..1892932+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007236-T1 ID=KJC3_007236-T1|Name=KJC3_007236-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2123bp|location=Sequence derived from alignment at ch5:1890810..1892932+ (Aspergillus niger KJC3)
CTCTCGTTAATAGTCAGGCATTGGTAGACCCAAGCTCAACTTTTACTGCC
CATTAGACTTTCTTTCGTTTTACAATTTTTTGTTTATATACCAGTACTCT
CGTTTGTTTTCGCCAATTGTTTGATCTACAAAGCATATCATTATGAGACT
TCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGCGCTCGCCG
TCGACCCCATCGAAATCAAGGTATGATTCCTTCTAATGCCCTTCTTCTAG
CATTTGTAATGCTCATTCCATCTAGGGTTCCAAGTTCTTCTACTCCAGCA
ATGACACTCAATTGTAAGTTTTCATCTAATATGCTTCCACCGTATGAGAT
CAAGTTCTAACATGGTTCCAGCTTCCTCCGCGGTGTGGCGTATCAGAGTC
GGTAGTTTCCTCCTGGTATATCGTTCAAAACTAATTCTCCAAAACAGAGA
GCACCACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGCGCGACATC
CCCTACATGAAGGAGTTGCGCACCAACGTCATTCGTACCTACGACATTGA
CCCTACAGCTGATCACGATGATTGCATGCAGCTTCTCGCCGACGCTGGCA
TCTACGTTATTGCTGATCTCTCCAACACGAGCGTCGCCATCGACCGCAGT
GATCCTGCCTGGCAGCTCACCCTGTACAACCGCTACACCAGTGTCATTGA
CGCCATGGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGGCAATGAAA
TTGCCAACAGTGTTGGAACCACTGACGCCATGCCCTACGTCAAGGCTGCC
ATCCGTGATATGAAAACCTACATCAGCAACAAGGGATACCGTACCATTGG
TGTGGGATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGACCTGGCCG
ACTACATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCTTCGGTTAC
AACATCTACTCCTGGTGCGGTGACTCAACCTACGCGGAATCGGGATACAA
GTCTCGTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTTCTTCTCCG
AGTACGGTTGCAACAGTGTCACTCCTCGTACATTCACTGAAGTTGCGGCT
CTCTACGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATTGTCTACGA
GTACTTCCAAGACACCAACGACTATGGTTAGTCCCCTCTATTCTTCGCTA
CTTCAGCAGAAACATTCTAACCATTTACAGGCCTGGTCTCCGTCATCGAC
AGTACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCCAAGGAAAT
CGCCAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCCACCA
ACACCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGCCAAG
GCCTCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCATGGT
CGACGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGACGACATCG
GTGACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTATCACC
GGCAACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACAGCAA
GCAGCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAGTCCG
CCGGTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCACCAAG
TCTGCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGGCTGG
TACTGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCTGGAT
CGAGCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGCTGGT
GCCAAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGGCCGT
TGCTGTTGTTAGCGGTTTTGCTATGATTATGTTGTAGATGGACTGAACTA
GAGAGCCCACTGTTTGTGTGGGGTCGTTAGATCGCTCCGGCATGTTCTTT
TTCATCTGCTATTTTGTTTCTGTTTCCGCTCTTGTTGATCGAGTTTGTAC
TTGACAATTGGACAATATTCTCTTTATCCAGTATATATTGATCTTCTTAT
TACTCTGAATTCTTTTTTCCAGC back to topCoding sequence (CDS) from alignment at ch5:1890810..1892932+ >KJC3_007236-T1 ID=KJC3_007236-T1|Name=KJC3_007236-T1|organism=Aspergillus niger KJC3|type=CDS|length=7890bp|location=Sequence derived from alignment at ch5:1890810..1892932+ (Aspergillus niger KJC3)
ATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGC
GCTCGCCGTCGACCCCATCGAAATCAAGGGTTCCAAGTTCTTCTACTCCA
GCAATGACACTCAATTCTTCCTCCGCGGTGTGGCGTATCAGAAGAGCACC
ACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGCGCGACATCCCCTA
CATGAAGGAGTTGCGCACCAACGTCATTCGTACCTACGACATTGACCCTA
CAGCTGATCACGATGATTGCATGCAGCTTCTCGCCGACGCTGGCATCTAC
GTTATTGCTGATCTCTCCAACACGAGCGTCGCCATCGACCGCAGTGATCC
TGCCTGGCAGCTCACCCTGTACAACCGCTACACCAGTGTCATTGACGCCA
TGGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGGCAATGAAATTGCC
AACAGTGTTGGAACCACTGACGCCATGCCCTACGTCAAGGCTGCCATCCG
TGATATGAAAACCTACATCAGCAACAAGGGATACCGTACCATTGGTGTGG
GATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGACCTGGCCGACTAC
ATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCTTCGGTTACAACAT
CTACTCCTGGTGCGGTGACTCAACCTACGCGGAATCGGGATACAAGTCTC
GTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTTCTTCTCCGAGTAC
GGTTGCAACAGTGTCACTCCTCGTACATTCACTGAAGTTGCGGCTCTCTA
CGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATTGTCTACGAGTACT
TCCAAGACACCAACGACTATGGCCTGGTCTCCGTCATCGACAGTACCAGC
GTCAGCACCATGACCGACTTCAGCTACTACTCCAAGGAAATCGCCAGCGC
CACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCCACCAACACCGCCC
TCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGCCAAGGCCTCTCCC
CTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCATGGTCGACGCCGC
CACCTGCACCGTCAAGGACTCCCTCGACTCCGACGACATCGGTGACCTGA
TGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTATCACCGGCAACGGC
ACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACAGCAAGCAGCAGCT
TGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAGTCCGCCGGTAACG
CTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCACCAAGTCTGCTACC
TCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGGCTGGTACTGCCGG
CACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCTGGATCGAGCGGTT
CGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGCTGGTGCCAAGGCC
GTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGGCCGTTGCTGTTGT
TAGCGGTTTTGCTATGATTATGTTGTAGATGAGACTTCTCCATCTGGCTG
CTGGTGCAGCCCTTTTCGCCAGCTCGGCGCTCGCCGTCGACCCCATCGAA
ATCAAGGGTTCCAAGTTCTTCTACTCCAGCAATGACACTCAATTCTTCCT
CCGCGGTGTGGCGTATCAGAAGAGCACCACTGCCGACCCCTTGAGTTCCA
AGACCACCTGCGAGCGCGACATCCCCTACATGAAGGAGTTGCGCACCAAC
GTCATTCGTACCTACGACATTGACCCTACAGCTGATCACGATGATTGCAT
GCAGCTTCTCGCCGACGCTGGCATCTACGTTATTGCTGATCTCTCCAACA
CGAGCGTCGCCATCGACCGCAGTGATCCTGCCTGGCAGCTCACCCTGTAC
AACCGCTACACCAGTGTCATTGACGCCATGGCCGGTTACAACAACACTCT
CGGCTTCTTTGCTGGCAATGAAATTGCCAACAGTGTTGGAACCACTGACG
CCATGCCCTACGTCAAGGCTGCCATCCGTGATATGAAAACCTACATCAGC
AACAAGGGATACCGTACCATTGGTGTGGGATACGCCACCGCTGATGTTTC
CTCCATCCGTGCTGACCTGGCCGACTACATTAACTGCCAGTCGGAGTCTG
TCGGTATTGATTTCTTCGGTTACAACATCTACTCCTGGTGCGGTGACTCA
ACCTACGCGGAATCGGGATACAAGTCTCGTACCGAAGAGTTTGCCAACTA
CTCCGTCCCTGTCTTCTTCTCCGAGTACGGTTGCAACAGTGTCACTCCTC
GTACATTCACTGAAGTTGCGGCTCTCTACGGCGATACGATGTCCCAGGTC
TGGTCTGGTGGTATTGTCTACGAGTACTTCCAAGACACCAACGACTATGG
CCTGGTCTCCGTCATCGACAGTACCAGCGTCAGCACCATGACCGACTTCA
GCTACTACTCCAAGGAAATCGCCAGCGCCACCCCCAGCAGCACCAACAAG
GCCTCCTACACCCCCACCAACACCGCCCTCCGCAGCTGCCCTACTGAGAA
CTCCTCCTGGAAGGCCAAGGCCTCTCCCCTTCCCCCCACCCCGGACTCTG
ATCTCTGTGAATGCATGGTCGACGCCGCCACCTGCACCGTCAAGGACTCC
CTCGACTCCGACGACATCGGTGACCTGATGGGCGAAGTCTGCGGTATGAT
GTCCTGCTCCGGTATCACCGGCAACGGCACCACCGGCAAGTACGGCGCCT
ACAGCATGTGCAACAGCAAGCAGCAGCTTGTCTTCGTCCTGAACGAGTAC
TACGAGAAGCAGAAGTCCGCCGGTAACGCTGCCTCTGCTTGCAGCTGGGG
TGGCTCCGCTACCACCAAGTCTGCTACCTCCGCCACCGGTTCTTGCAAGA
CTTACATGTCCGAGGCTGGTACTGCCGGCACGGGTCTCGTTACTTCTGAG
GCTACTGCCACTGCTGGATCGAGCGGTTCGACTGCCTCGTCTACTTCCGT
CTCTAGCACTTCCGCTGGTGCCAAGGCCGTCCATGTCGGTTACTTCCAGC
TCGCTGTTTACGTGGCCGTTGCTGTTGTTAGCGGTTTTGCTATGATTATG
TTGTAGATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAG
CTCGGCGCTCGCCGTCGACCCCATCGAAATCAAGGGTTCCAAGTTCTTCT
ACTCCAGCAATGACACTCAATTCTTCCTCCGCGGTGTGGCGTATCAGAAG
AGCACCACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGCGCGACAT
CCCCTACATGAAGGAGTTGCGCACCAACGTCATTCGTACCTACGACATTG
ACCCTACAGCTGATCACGATGATTGCATGCAGCTTCTCGCCGACGCTGGC
ATCTACGTTATTGCTGATCTCTCCAACACGAGCGTCGCCATCGACCGCAG
TGATCCTGCCTGGCAGCTCACCCTGTACAACCGCTACACCAGTGTCATTG
ACGCCATGGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGGCAATGAA
ATTGCCAACAGTGTTGGAACCACTGACGCCATGCCCTACGTCAAGGCTGC
CATCCGTGATATGAAAACCTACATCAGCAACAAGGGATACCGTACCATTG
GTGTGGGATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGACCTGGCC
GACTACATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCTTCGGTTA
CAACATCTACTCCTGGTGCGGTGACTCAACCTACGCGGAATCGGGATACA
AGTCTCGTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTTCTTCTCC
GAGTACGGTTGCAACAGTGTCACTCCTCGTACATTCACTGAAGTTGCGGC
TCTCTACGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATTGTCTACG
AGTACTTCCAAGACACCAACGACTATGGCCTGGTCTCCGTCATCGACAGT
ACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCCAAGGAAATCGC
CAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCCACCAACA
CCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGCCAAGGCC
TCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCATGGTCGA
CGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGACGACATCGGTG
ACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTATCACCGGC
AACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACAGCAAGCA
GCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAGTCCGCCG
GTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCACCAAGTCT
GCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGGCTGGTAC
TGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCTGGATCGA
GCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGCTGGTGCC
AAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGGCCGTTGC
TGTTGTTAGCGGTTTTGCTATGATTATGTTGTAGATGAGACTTCTCCATC
TGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGCGCTCGCCGTCGACCCC
ATCGAAATCAAGGGTTCCAAGTTCTTCTACTCCAGCAATGACACTCAATT
CTTCCTCCGCGGTGTGGCGTATCAGAAGAGCACCACTGCCGACCCCTTGA
GTTCCAAGACCACCTGCGAGCGCGACATCCCCTACATGAAGGAGTTGCGC
ACCAACGTCATTCGTACCTACGACATTGACCCTACAGCTGATCACGATGA
TTGCATGCAGCTTCTCGCCGACGCTGGCATCTACGTTATTGCTGATCTCT
CCAACACGAGCGTCGCCATCGACCGCAGTGATCCTGCCTGGCAGCTCACC
CTGTACAACCGCTACACCAGTGTCATTGACGCCATGGCCGGTTACAACAA
CACTCTCGGCTTCTTTGCTGGCAATGAAATTGCCAACAGTGTTGGAACCA
CTGACGCCATGCCCTACGTCAAGGCTGCCATCCGTGATATGAAAACCTAC
ATCAGCAACAAGGGATACCGTACCATTGGTGTGGGATACGCCACCGCTGA
TGTTTCCTCCATCCGTGCTGACCTGGCCGACTACATTAACTGCCAGTCGG
AGTCTGTCGGTATTGATTTCTTCGGTTACAACATCTACTCCTGGTGCGGT
GACTCAACCTACGCGGAATCGGGATACAAGTCTCGTACCGAAGAGTTTGC
CAACTACTCCGTCCCTGTCTTCTTCTCCGAGTACGGTTGCAACAGTGTCA
CTCCTCGTACATTCACTGAAGTTGCGGCTCTCTACGGCGATACGATGTCC
CAGGTCTGGTCTGGTGGTATTGTCTACGAGTACTTCCAAGACACCAACGA
CTATGGCCTGGTCTCCGTCATCGACAGTACCAGCGTCAGCACCATGACCG
ACTTCAGCTACTACTCCAAGGAAATCGCCAGCGCCACCCCCAGCAGCACC
AACAAGGCCTCCTACACCCCCACCAACACCGCCCTCCGCAGCTGCCCTAC
TGAGAACTCCTCCTGGAAGGCCAAGGCCTCTCCCCTTCCCCCCACCCCGG
ACTCTGATCTCTGTGAATGCATGGTCGACGCCGCCACCTGCACCGTCAAG
GACTCCCTCGACTCCGACGACATCGGTGACCTGATGGGCGAAGTCTGCGG
TATGATGTCCTGCTCCGGTATCACCGGCAACGGCACCACCGGCAAGTACG
GCGCCTACAGCATGTGCAACAGCAAGCAGCAGCTTGTCTTCGTCCTGAAC
GAGTACTACGAGAAGCAGAAGTCCGCCGGTAACGCTGCCTCTGCTTGCAG
CTGGGGTGGCTCCGCTACCACCAAGTCTGCTACCTCCGCCACCGGTTCTT
GCAAGACTTACATGTCCGAGGCTGGTACTGCCGGCACGGGTCTCGTTACT
TCTGAGGCTACTGCCACTGCTGGATCGAGCGGTTCGACTGCCTCGTCTAC
TTCCGTCTCTAGCACTTCCGCTGGTGCCAAGGCCGTCCATGTCGGTTACT
TCCAGCTCGCTGTTTACGTGGCCGTTGCTGTTGTTAGCGGTTTTGCTATG
ATTATGTTGTAGATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTT
CGCCAGCTCGGCGCTCGCCGTCGACCCCATCGAAATCAAGGGTTCCAAGT
TCTTCTACTCCAGCAATGACACTCAATTCTTCCTCCGCGGTGTGGCGTAT
CAGAAGAGCACCACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGCG
CGACATCCCCTACATGAAGGAGTTGCGCACCAACGTCATTCGTACCTACG
ACATTGACCCTACAGCTGATCACGATGATTGCATGCAGCTTCTCGCCGAC
GCTGGCATCTACGTTATTGCTGATCTCTCCAACACGAGCGTCGCCATCGA
CCGCAGTGATCCTGCCTGGCAGCTCACCCTGTACAACCGCTACACCAGTG
TCATTGACGCCATGGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGGC
AATGAAATTGCCAACAGTGTTGGAACCACTGACGCCATGCCCTACGTCAA
GGCTGCCATCCGTGATATGAAAACCTACATCAGCAACAAGGGATACCGTA
CCATTGGTGTGGGATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGAC
CTGGCCGACTACATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCTT
CGGTTACAACATCTACTCCTGGTGCGGTGACTCAACCTACGCGGAATCGG
GATACAAGTCTCGTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTTC
TTCTCCGAGTACGGTTGCAACAGTGTCACTCCTCGTACATTCACTGAAGT
TGCGGCTCTCTACGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATTG
TCTACGAGTACTTCCAAGACACCAACGACTATGGCCTGGTCTCCGTCATC
GACAGTACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCCAAGGA
AATCGCCAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCCA
CCAACACCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGCC
AAGGCCTCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCAT
GGTCGACGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGACGACA
TCGGTGACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTATC
ACCGGCAACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACAG
CAAGCAGCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAGT
CCGCCGGTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCACC
AAGTCTGCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGGC
TGGTACTGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCTG
GATCGAGCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGCT
GGTGCCAAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGGC
CGTTGCTGTTGTTAGCGGTTTTGCTATGATTATGTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007236-T1.utr5p1 | KJC3_007236-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007236-T1.utr3p1 | KJC3_007236-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:CBM43 |
| Note | CAZy:GH72 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR004886 |
| DBxref | InterPro:IPR012946 |
| DBxref | PFAM:PF07983 |
| DBxref | PFAM:PF03198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1890810..1892932 + |
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