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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2020085..2022425- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007284-T1 ID=KJC3_007284-T1|Name=KJC3_007284-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2341bp|location=Sequence derived from alignment at ch5:2020085..2022425- (Aspergillus niger KJC3)
CAAAACCCACCTCCTACCTCGTCAGCGCGCGAAAATCCATTGCGCTGGCC
GGCGAGAGCTCAAAATCAATTATTTATTTCTCCTATTATTCATAATGCCC
GTTCCTGAAAGGGCACCCCTCCATCGGATCTATCACTATGGACTATTGAG
TCTCCTCTTCCTCCACACATCCACCGCAGCGGGGAGATCCAGCAACGAGC
AACGCGCAACAGCAAATCCAGGCTACACTTATGGCCAAGCTGTGCCAGTG
ACATGTCTGAACCGGACGATGTAAGCCTCTCTCCTCTCTTTCCATTCATA
ACCCCACCCAATAGTCTGTTTAAAGAACAACGTACTAACGCAATTGGCAA
CAGTGACTCCGGCGAACACGTAACGCCACCCACATCCACAATGACCCCAA
CCGCAAAACCTCAAACCAACTAACAAATCATACTGATAAAATAGATCACC
GACCCCCTCGGCAACCTCCAATACATCCCCTTTCCAACATGCAACGAAAC
CTCCCAACCCTTATCCCTGCACTACGGCGTCGCCGAACAGACTCTAACAT
GCACCATTGCCTCCCTCCCCGATGAACTCTACCATCTCCTAGAGTACTAC
GTCCACTCGGACGTCCCCATGACATGTCGCGTCCCCACTGCGCCCCTTCT
CTCTTCATCCTCTCCGGATATCGACATCATTGATACCATTGACGCCTCCG
GCGAACAAGCCTACACGCCCATCACCTTCGCCATCCAGGGCACTCTGCAG
CTAAGCCATTTGCACATATGGACGGATATGAACGTGCTTGTGCATAACAT
GGCTAGTACGGAGAAGAAGAAGCGCAAGGACCCGGGATATGTTGTTGCGG
GCACGGCGTACAGTGTGCCCGAGTTTGATAATCGTGGGGCGAGGGAGCCT
TGGACGGAGGGACATGGGACGAAGGTTGTGAGGGGTGAGCCGTTGACGTT
TCGGTTTAGTGTCAAGTGGGTGGAGGGGGGGAGGGGGATTGGGTGGCCTT
CTTCTGATGGTGGGTATGGGGAGGAGGAGGGAAGTTGTGGGGGCTGGTTC
TCCAGGTTGATGTTCTTTGGGTTTGCTGCGGCCGTTGGGGCTGTTGCGGC
AGTTTATTGGGAGAGGGTGTATGGACGTGGACGGGGACGGGGAGAGGGAA
TTCTGGGTGTGACTGGTGGTGGTGGTAGGAAGGGGTTCGGGGCGAATGGG
AATGGGGTGAGGATGAATGGGTATGGAGGGTATTCGCCTGCTGCTGTGGG
AGGAACCGGTGGTGGTAGTAGTGTAGGAGGGTATGGGTATGGAGGGTATA
TGAGTGGGAAGAGGGATTGATGAGTGTATATATAGAGATATGATTGATGC
TGACGACTTTGCCTGGGTAGACGGAGATACAAACAAAAGCCAGATGCAGA
CGCAGATGCAGATATACTACCATTCATGTAGATTCAAGGACACATATAAA
ACCAATCGAAACACGAAGACATGCAGCAAAACACATAGTATAATACACAA
TAATATGACCCTTTTATCCCACCCCATCCCTTCTATACAAACCCCTCCGG
GGATAACAATAATCTACCACCCCTGTCCTCTAATCTTCTGAATCCTCTTA
ACCGTCGCCCCAAACGAATACTTGAACAGGTTCCTCCACCGCTTCATGCG
CAACTGCTTCCTAACCATACCCTTCCTAACATGAAACTTCTGCTTCGCCA
ACGACTGCCTCATCTTATTCTGCGAAATAACCGTGCCCAGGGACCTCAAC
GCCGCAGGCAAATCCATCCCCCGTTCCGGCTCAACCGTCACCTGTCTTCC
CAGCGTCGGACCAAGCTTCAGATCGATCTTGCGCAGGGATGTAGCGGTCC
GCAGGCTGTCGGTCTCGGCGGAGAGGCCTACCGCGCGGGAGAGGGAGAGG
CTGTCGTTGAAGGCGCGGGTAGTGGTGGTGCCGGAGGCAGCAGCGGGGGT
GGGAGTGGTAGCGGTGTTGGTGTTGTTGAAGTTGAGCTTGTTGAGGATTT
GGTCGAAGTCGGTGGGTTTTTGGGTTGGTGTGGAGGTAGAGGAGGGTTGT
TGTGTTTGGCGGGTGGGGGGTTGTGTGTTGTTGGTATTGTTCTTGTTGGA
TGGGGAGGAAGATTCAGAGGAAGAGAAGCGCATGCCAATTCGTGCTGCTG
GGAGCTGGTTCTTGTAGAGGGTCGATGTTGTTGGCCTCGACCGGAGGAGG
CTGCGGGATAGGGCGCGCATGTCCATGGTGATGGTGGGTAGGATTCAAAT
AATCCTAATCAATTGGTAGCTGCAGATGTGTGTTTCCCTCAAGGTATCAC
CGTCCTGTCCTGGCTGGAAGCTGTGGTCGAGGCGGACAGGC back to topCoding sequence (CDS) from alignment at ch5:2020085..2022425- >KJC3_007284-T1 ID=KJC3_007284-T1|Name=KJC3_007284-T1|organism=Aspergillus niger KJC3|type=CDS|length=3204bp|location=Sequence derived from alignment at ch5:2020085..2022425- (Aspergillus niger KJC3)
ATCACCGACCCCCTCGGCAACCTCCAATACATCCCCTTTCCAACATGCAA
CGAAACCTCCCAACCCTTATCCCTGCACTACGGCGTCGCCGAACAGACTC
TAACATGCACCATTGCCTCCCTCCCCGATGAACTCTACCATCTCCTAGAG
TACTACGTCCACTCGGACGTCCCCATGACATGTCGCGTCCCCACTGCGCC
CCTTCTCTCTTCATCCTCTCCGGATATCGACATCATTGATACCATTGACG
CCTCCGGCGAACAAGCCTACACGCCCATCACCTTCGCCATCCAGGGCACT
CTGCAGCTAAGCCATTTGCACATATGGACGGATATGAACGTGCTTGTGCA
TAACATGGCTAGTACGGAGAAGAAGAAGCGCAAGGACCCGGGATATGTTG
TTGCGGGCACGGCGTACAGTGTGCCCGAGTTTGATAATCGTGGGGCGAGG
GAGCCTTGGACGGAGGGACATGGGACGAAGGTTGTGAGGGGTGAGCCGTT
GACGTTTCGGTTTAGTGTCAAGTGGGTGGAGGGGGGGAGGGGGATTGGGT
GGCCTTCTTCTGATGGTGGGTATGGGGAGGAGGAGGGAAGTTGTGGGGGC
TGGTTCTCCAGGTTGATGTTCTTTGGGTTTGCTGCGGCCGTTGGGGCTGT
TGCGGCAGTTTATTGGGAGAGGGTGTATGGACGTGGACGGGGACGGGGAG
AGGGAATTCTGGGTGTGACTGGTGGTGGTGGTAGGAAGGGGTTCGGGGCG
AATGGGAATGGGGTGAGGATGAATGGGTATGGAGGGTATTCGCCTGCTGC
TGTGGGAGGAACCGGTGGTGGTAGTAGTGTAGGAGGGTATGGGTATGGAG
GGTATATGAGTGGGAAGAGGGATTGATGACTCCGGCGAACACATGCCCGT
TCCTGAAAGGGCACCCCTCCATCGGATCTATCACTATGGACTATTGAGTC
TCCTCTTCCTCCACACATCCACCGCAGCGGGGAGATCCAGCAACGAGCAA
CGCGCAACAGCAAATCCAGGCTACACTTATGGCCAAGCTGTGCCAGTGAC
ATGTCTGAACCGGACGATATCACCGACCCCCTCGGCAACCTCCAATACAT
CCCCTTTCCAACATGCAACGAAACCTCCCAACCCTTATCCCTGCACTACG
GCGTCGCCGAACAGACTCTAACATGCACCATTGCCTCCCTCCCCGATGAA
CTCTACCATCTCCTAGAGTACTACGTCCACTCGGACGTCCCCATGACATG
TCGCGTCCCCACTGCGCCCCTTCTCTCTTCATCCTCTCCGGATATCGACA
TCATTGATACCATTGACGCCTCCGGCGAACAAGCCTACACGCCCATCACC
TTCGCCATCCAGGGCACTCTGCAGCTAAGCCATTTGCACATATGGACGGA
TATGAACGTGCTTGTGCATAACATGGCTAGTACGGAGAAGAAGAAGCGCA
AGGACCCGGGATATGTTGTTGCGGGCACGGCGTACAGTGTGCCCGAGTTT
GATAATCGTGGGGCGAGGGAGCCTTGGACGGAGGGACATGGGACGAAGGT
TGTGAGGGGTGAGCCGTTGACGTTTCGGTTTAGTGTCAAGTGGGTGGAGG
GGGGGAGGGGGATTGGGTGGCCTTCTTCTGATGGTGGGTATGGGGAGGAG
GAGGGAAGTTGTGGGGGCTGGTTCTCCAGGTTGATGTTCTTTGGGTTTGC
TGCGGCCGTTGGGGCTGTTGCGGCAGTTTATTGGGAGAGGGTGTATGGAC
GTGGACGGGGACGGGGAGAGGGAATTCTGGGTGTGACTGGTGGTGGTGGT
AGGAAGGGGTTCGGGGCGAATGGGAATGGGGTGAGGATGAATGGGTATGG
AGGGTATTCGCCTGCTGCTGTGGGAGGAACCGGTGGTGGTAGTAGTGTAG
GAGGGTATGGGTATGGAGGGTATATGAGTGGGAAGAGGGATTGATGACTC
CGGCGAACACATGCCCGTTCCTGAAAGGGCACCCCTCCATCGGATCTATC
ACTATGGACTATTGAGTCTCCTCTTCCTCCACACATCCACCGCAGCGGGG
AGATCCAGCAACGAGCAACGCGCAACAGCAAATCCAGGCTACACTTATGG
CCAAGCTGTGCCAGTGACATGTCTGAACCGGACGATATCACCGACCCCCT
CGGCAACCTCCAATACATCCCCTTTCCAACATGCAACGAAACCTCCCAAC
CCTTATCCCTGCACTACGGCGTCGCCGAACAGACTCTAACATGCACCATT
GCCTCCCTCCCCGATGAACTCTACCATCTCCTAGAGTACTACGTCCACTC
GGACGTCCCCATGACATGTCGCGTCCCCACTGCGCCCCTTCTCTCTTCAT
CCTCTCCGGATATCGACATCATTGATACCATTGACGCCTCCGGCGAACAA
GCCTACACGCCCATCACCTTCGCCATCCAGGGCACTCTGCAGCTAAGCCA
TTTGCACATATGGACGGATATGAACGTGCTTGTGCATAACATGGCTAGTA
CGGAGAAGAAGAAGCGCAAGGACCCGGGATATGTTGTTGCGGGCACGGCG
TACAGTGTGCCCGAGTTTGATAATCGTGGGGCGAGGGAGCCTTGGACGGA
GGGACATGGGACGAAGGTTGTGAGGGGTGAGCCGTTGACGTTTCGGTTTA
GTGTCAAGTGGGTGGAGGGGGGGAGGGGGATTGGGTGGCCTTCTTCTGAT
GGTGGGTATGGGGAGGAGGAGGGAAGTTGTGGGGGCTGGTTCTCCAGGTT
GATGTTCTTTGGGTTTGCTGCGGCCGTTGGGGCTGTTGCGGCAGTTTATT
GGGAGAGGGTGTATGGACGTGGACGGGGACGGGGAGAGGGAATTCTGGGT
GTGACTGGTGGTGGTGGTAGGAAGGGGTTCGGGGCGAATGGGAATGGGGT
GAGGATGAATGGGTATGGAGGGTATTCGCCTGCTGCTGTGGGAGGAACCG
GTGGTGGTAGTAGTGTAGGAGGGTATGGGTATGGAGGGTATATGAGTGGG
AAGAGGGATTGATGACTCCGGCGAACACATGCCCGTTCCTGAAAGGGCAC
CCCTCCATCGGATCTATCACTATGGACTATTGAGTCTCCTCTTCCTCCAC
ACATCCACCGCAGCGGGGAGATCCAGCAACGAGCAACGCGCAACAGCAAA
TCCAGGCTACACTTATGGCCAAGCTGTGCCAGTGACATGTCTGAACCGGA
CGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007284-T1.utr3p1 | KJC3_007284-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007284-T1.utr5p1 | KJC3_007284-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-28) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2020085..2022425 - |
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