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KJC3_007299-T1, KJC3_007299-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007299-T1
Unique NameKJC3_007299-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2057036..2059302+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007299-T1 ID=KJC3_007299-T1|Name=KJC3_007299-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2267bp|location=Sequence derived from alignment at ch5:2057036..2059302+ (Aspergillus niger KJC3)
CTCCAACTAATATGCTGTCTAATATGTATCTAAAGTTAAAGAAAATCTAC
AAAAAGACCTGCTTGATGATAAAATGACGTTCGATGCATCCATACCAATT
GTAGCCATTGTCCCGTGTATCACGTGATCCAGGCACCGAAGCACCAGCCA
CAGATTGCATGCGCCACAGGCCATTTGCCGCGCCGAACAAATCCACAACG
GATCTTGCATCTTTCGCTGAAATCCAGAAATTCAGCAACAATCGGCGACA
TCATCAACCCCCCCATCACACGCACAATGTCGAAGCTTGGAAAGTAAGCG
GAAACTCCCCACCCCCAAAAAACCAGGGCCACGAAGCGACAAAAAAGAAG
AAAAAGAAAGAAAGAAAATCTGACCAGGACCTTTTTCCACTTTCCAGCCG
CGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCC
CGCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTCCTAC
CGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAAC
GACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCT
GGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGAT
ACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAA
GCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGA
AGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAG
CACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGA
GCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCG
CTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGT
GCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTT
GGCGACTCTGAGAGTTACGAACGTGAGTTTTCCCATCCCCTCCTTGTTTT
GATTTACTGTTCTGTGTTTGGCTATTTGCTGGTCTCCCCGGAGGGGTTGG
GGGAGGGGTCGAGGGACAGGGGATGCTAGTTTTCCTCTTTCTGTCTCTTT
CTCTCCTCCTTTCCCTTGCCTGCTCTGCCCTCCCTTTGCCCTCTAAACAC
TCCTATTGGTGTCGTTCAGAGGGAGAAAGAAAGAGGCAGCAGCCCTTTCG
GGCAGACACATGGATGTCATGAGAACAGCAATCAGCTTCCTCTAATTTCC
TTGCTTCTATTGCATTTGCTTCCCACGGACACATCACTGACTGACAATAA
ACCCAAACAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGT
TCGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAA
ACCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGA
TGCTGCACGTGCTTGCGAGAAGATGGATGGCTGTAAGTTATCCCTCCCGG
TTACGTTTCCATTTTTCGTCATATTCTGTTTTGTTTTTTTCCGCCATCGT
TGCAATGTCAGCAGCAAAGCAAGTTATCGGAATCGCAACTAACATTTCCT
CTTCATCTAGTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAA
GCGTGCCACTTAGATTTCTCCAATTTCCAATTCCCATTTTTTCTTCCCAT
TTTATTCTCCTCCTTATTAACTTCTTCTTTTGCTTCTTGGTTTTCCGTAC
GTATCATGACATGACACCCTTGGGTCTCTTTTCGTCTGGCAGGCGGGTTC
TCCATCCATCCACACTTTCCATGGCTGAAGAAGATCTTCATCTCATCTAT
TGACTACTTTTCTTTGTACTGTATGATCCGATCGATAATGATGATTACTG
AAGAAAAAAAATGGGGGAGGACATCCCAATGTGTGTGCGTGTGTCGTCTT
CTCTTTGCTTTTTGGGTCGATTTGATACGAAGAAAAGCAGCGTGGTCTAT
TTGTCTTATTCACGCACTACTCTTTTCCGGTTCTATGTGTCTATTTGTCA
TGCTGAGTTGCAAGTCAAGGCAAGGCAAGGCAAGCTTGCTTGCAAGCCCT
CTTTTCCTTGTTTACTTTTCCGTGCATTGATCGATCGCGGGTGGAAGTAT
ACTTAGATCGAGGGAGAAGGTTCAAACCCAAAAAACAAAAGTATTTCAAT
TTGCTCGTTCGAGTCAC
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Coding sequence (CDS) from alignment at ch5:2057036..2059302+

>KJC3_007299-T1 ID=KJC3_007299-T1|Name=KJC3_007299-T1|organism=Aspergillus niger KJC3|type=CDS|length=3468bp|location=Sequence derived from alignment at ch5:2057036..2059302+ (Aspergillus niger KJC3)
ATGTCGAAGCTTGGAAACCGCGCCGACTGGGCCGACGACGAGGAGTTCGA
CGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCA
CGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAG
GTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCA
GGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACG
CGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTC
CGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGG
TGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGT
GTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGAT
ACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGA
GGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGC
CCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGC
AAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGAGCGA
GTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTG
TCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGC
TTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGA
GAAGATGGATGGCTTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCG
CCAAGCGTGCCACTTAGATGTCGAAGCTTGGAAACCGCGCCGACTGGGCC
GACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCAC
GACCAACAAAGATGGCACGAAGACGATCGTCTCCTACCGATTCAACGACG
AAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGC
GAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGG
TCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGG
GTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCT
GAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAA
GGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTC
GCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGT
GGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGG
TACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCG
GAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGA
GTTACGAACGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTT
CGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAA
CCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGAT
GCTGCACGTGCTTGCGAGAAGATGGATGGCTTCGGTTACCGTCACCTTAT
CCTGCGCGTCGAATTCGCCAAGCGTGCCACTTAGATGTCGAAGCTTGGAA
ACCGCGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTC
CCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTC
CTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCA
AAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGG
TCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTT
CGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACT
GGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGT
GTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGG
CGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCG
ACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCT
GGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAA
GGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATG
ATTTGGCGACTCTGAGAGTTACGAACGTGAGCGAGTTGGCAGAGGAAGGA
GAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCAGAGTCTTCCT
TGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCT
TTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGATGGATGGCTTC
GGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTTA
GATGTCGAAGCTTGGAAACCGCGCCGACTGGGCCGACGACGAGGAGTTCG
ACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGC
ACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAA
GGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGC
AGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAAC
GCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTT
CCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACG
GTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAG
TGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGA
TACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATG
AGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTG
CCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGG
CAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGAGCG
AGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGT
GTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGG
CTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCG
AGAAGATGGATGGCTTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTC
GCCAAGCGTGCCACTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF35KJC3_007299Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007299-T1KJC3_007299-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007299-T1.utr5p1KJC3_007299-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007299-T1.exon1KJC3_007299-T1.exon1Aspergillus niger KJC3exon
KJC3_007299-T1.exon2KJC3_007299-T1.exon2Aspergillus niger KJC3exon
KJC3_007299-T1.exon3KJC3_007299-T1.exon3Aspergillus niger KJC3exon
KJC3_007299-T1.exon4KJC3_007299-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007299-T1.cdsKJC3_007299-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007299-T1.utr3p1KJC3_007299-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926489S
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034240
DBxrefInterPro:IPR024675
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR017334
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF12353
Producttranslation initiation factor eIF3 subunit g
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2057036..2059302 +
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