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KJC3_007310-T1, KJC3_007310-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007310-T1
Unique NameKJC3_007310-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2108071..2109071-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007310-T1 ID=KJC3_007310-T1|Name=KJC3_007310-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1001bp|location=Sequence derived from alignment at ch5:2108071..2109071- (Aspergillus niger KJC3)
CCTCTACTCTCTGAATATCATATCATCTACATTTATCTCTCTACTACCTT
TATCCAAGACTCACTTCATTCATCATGTCTGAACGCTCCACCGTCCACGT
CGAGGGCATTGCCTCCGCTACCACCGACAAGGAGGTCCAAGATTTCTTTA
GCTTCTGGTATGCAATGCACGCATTTCAAACCATCCCTTGCATGAACTGC
ACGGCTGACAAGCTTACAGCGGAAAGATCACCCACATTTCCGTGACCCCC
GTTTCAGGCGAAGCTGATGCCCAAAAGTCGGCCACTGTTACTTTCGAAAA
GGAAGCGTAAGTTACCCCGCACCTTACCCGTCATTGTTGCCAAATGACAC
CATCTCGCCCACTCTCCATCAAAGCTAACCATGATTCTCTGCGATAGTGC
TGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTCTCG
TGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAGGCC
GCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCAGGA
GGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCTACA
CCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAGCAC
GGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAAGTA
CCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCAGCG
ACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAGGCT
CTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGACCGA
TAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATCTGA
AGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGCACG
GCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGCGTA
A
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Coding sequence (CDS) from alignment at ch5:2108071..2109071-

>KJC3_007310-T1 ID=KJC3_007310-T1|Name=KJC3_007310-T1|organism=Aspergillus niger KJC3|type=CDS|length=2322bp|location=Sequence derived from alignment at ch5:2108071..2109071- (Aspergillus niger KJC3)
TGCTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTC
TCGTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAG
GCCGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCA
GGAGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCT
ACACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAG
CACGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAA
GTACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCA
GCGACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAG
GCTCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGAC
CGATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATC
TGAAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGC
ACGGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGC
GTAACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCT
GATGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAA
CGCTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGA
GGTCCAAGATTTCTTTAGCTTCTGTGCTGCTAAGACCGCTCTTCTCCTCG
ACAACACCCAGCTTGGTTCCTCTCTCGTGCACGTCAAGGCTGCCCAGAGC
CTCGACGACATCGCCGGCGAGCAGGCCGCCAGCGCCGGACAAGCCAAGGA
CGAGTACAACCACGACCTCGAGCAGGAGGACAAGCCCCGTTCTCGCATTG
TAGCTGAGTACCTGGCCCACGGCTACACCCTCAGCGACAATGCCATCCAG
AAGGCCATTGCCCTGGACAACAAGCACGGGTTCTCGTCGCGCTTCACCAG
CGCTCTGTCTTCCTTCGACCAGAAGTACCATGCCACGGACCGTGCTCGCG
GTCTGGACGAGAACTACAAGCTCAGCGACAAGGCGACCACTGGCTGGCGT
AGTCTGAACCACTACTTCGAGAAGGCTCTCGACACTCCCTCGGGCAGGAA
GTTGCGGGACTTTTACTCCCAGACCGATAAGCAGGTGCGCGATATTCACA
ACGAGGCTCGCAGACTTGCGGATCTGAAGAGCGGCAAGTCTACTACTGAG
GGTGGTGAGGCTCCTGCTCCTAGCACGGCGCCTGCTACTCAGCCGGCGGG
TACTGCTGCTCCTGCTGAGCAGGCGTAACGGAAAGATCACCCACATTTCC
GTGACCCCCGTTTCAGGCGAAGCTGATGCCCAAAAGTCGGCCACTGTTAC
TTTCGAAAAGGAAGCATGTCTGAACGCTCCACCGTCCACGTCGAGGGCAT
TGCCTCCGCTACCACCGACAAGGAGGTCCAAGATTTCTTTAGCTTCTGTG
CTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTCTC
GTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAGGC
CGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCAGG
AGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCTAC
ACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAGCA
CGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAAGT
ACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCAGC
GACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAGGC
TCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGACCG
ATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATCTG
AAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGCAC
GGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGCGT
AACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCTGA
TGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAACG
CTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGAGG
TCCAAGATTTCTTTAGCTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007310KJC3_007310Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007310-T1KJC3_007310-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007310-T1.cdsKJC3_007310-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007310-T1.exon3KJC3_007310-T1.exon3Aspergillus niger KJC3exon
KJC3_007310-T1.exon2KJC3_007310-T1.exon2Aspergillus niger KJC3exon
KJC3_007310-T1.exon1KJC3_007310-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007310-T1.utr5p1KJC3_007310-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF14605
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2108071..2109071 -
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